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PMC:1140370 / 11052-11326 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T3477 145-154 VBD denotes conducted
T3461 0-4 WRB denotes when
T3462 41-49 VBZ denotes contains
T3463 5-8 DT denotes the
T3464 33-40 NN denotes segment
T3465 9-16 JJ denotes central
T3466 17-23 JJ denotes single
T3467 24-32 VBN denotes stranded
T3468 23-24 HYPH denotes -
T3469 50-57 NN denotes thymine
T3470 58-67 NNS denotes stretches
T3471 68-69 -LRB- denotes (
T3472 69-71 CD denotes 13
T3473 71-72 -RRB- denotes )
T3474 72-73 . denotes .
T3476 74-76 IN denotes In
T3478 77-82 NN denotes order
T3479 83-85 TO denotes to
T3480 86-93 VB denotes examine
T3481 94-97 DT denotes the
T3482 98-102 NN denotes mode
T3483 103-105 IN denotes of
T3484 106-113 NN denotes binding
T3485 114-116 IN denotes of
T3486 117-121 NN denotes Mcm4
T3487 121-122 HYPH denotes /
T3488 122-123 CD denotes 6
T3489 123-124 HYPH denotes /
T3490 124-125 CD denotes 7
T3491 126-128 IN denotes on
T3492 129-135 NN denotes bubble
T3493 136-140 NNS denotes DNAs
T3494 140-142 , denotes ,
T3495 142-144 PRP denotes we
T3496 155-163 NN denotes nuclease
T3497 175-181 NNS denotes assays
T3498 164-174 NN denotes protection
T3499 182-187 VBG denotes using
T3500 188-195 VBN denotes labeled
T3501 213-217 NNS denotes DNAs
T3502 196-202 NN denotes bubble
T3503 203-212 NN denotes substrate
T3504 218-221 CC denotes and
T3505 222-226 NN denotes Mcm4
T3506 226-227 HYPH denotes /
T3507 227-228 CD denotes 6
T3508 228-229 HYPH denotes /
T3509 229-230 CD denotes 7
T3510 231-233 IN denotes in
T3511 234-237 DT denotes the
T3512 238-246 NN denotes presence
T3513 247-249 IN denotes of
T3514 250-253 NN denotes ATP
T3515 256-257 NN denotes S
T3516 253-254 HYPH denotes -
T3517 254-255 SYM denotes γ
T3518 255-256 HYPH denotes -
T3519 258-263 WDT denotes which
T3520 264-271 VBZ denotes permits
R2183 T3461 T3462 advmod when,contains
R2185 T3463 T3464 det the,segment
R2186 T3464 T3462 nsubj segment,contains
R2187 T3465 T3464 amod central,segment
R2188 T3466 T3467 amod single,stranded
R2189 T3467 T3464 amod stranded,segment
R2190 T3468 T3467 punct -,stranded
R2191 T3469 T3470 compound thymine,stretches
R2192 T3470 T3462 dobj stretches,contains
R2193 T3471 T3472 punct (,13
R2194 T3472 T3462 parataxis 13,contains
R2195 T3473 T3472 punct ),13
R2197 T3476 T3477 prep In,conducted
R2198 T3478 T3476 pobj order,In
R2199 T3479 T3480 aux to,examine
R2200 T3480 T3478 acl examine,order
R2201 T3481 T3482 det the,mode
R2202 T3482 T3480 dobj mode,examine
R2203 T3483 T3482 prep of,mode
R2204 T3484 T3483 pobj binding,of
R2205 T3485 T3484 prep of,binding
R2206 T3486 T3485 pobj Mcm4,of
R2207 T3487 T3486 punct /,Mcm4
R2208 T3488 T3486 nummod 6,Mcm4
R2209 T3489 T3486 punct /,Mcm4
R2210 T3490 T3486 nummod 7,Mcm4
R2211 T3491 T3484 prep on,binding
R2212 T3492 T3493 compound bubble,DNAs
R2213 T3493 T3491 pobj DNAs,on
R2214 T3494 T3477 punct ", ",conducted
R2215 T3495 T3477 nsubj we,conducted
R2216 T3496 T3497 compound nuclease,assays
R2217 T3497 T3477 dobj assays,conducted
R2218 T3498 T3497 compound protection,assays
R2219 T3499 T3477 advcl using,conducted
R2220 T3500 T3501 amod labeled,DNAs
R2221 T3501 T3499 dobj DNAs,using
R2222 T3502 T3503 compound bubble,substrate
R2223 T3503 T3501 compound substrate,DNAs
R2224 T3504 T3501 cc and,DNAs
R2225 T3505 T3501 conj Mcm4,DNAs
R2226 T3506 T3505 punct /,Mcm4
R2227 T3507 T3505 nummod 6,Mcm4
R2228 T3508 T3505 punct /,Mcm4
R2229 T3509 T3505 nummod 7,Mcm4
R2230 T3510 T3477 prep in,conducted
R2231 T3511 T3512 det the,presence
R2232 T3512 T3510 pobj presence,in
R2233 T3513 T3512 prep of,presence
R2234 T3514 T3515 nmod ATP,S
R2235 T3515 T3513 pobj S,of
R2236 T3516 T3515 punct -,S
R2237 T3517 T3515 punct γ,S
R2238 T3518 T3515 punct -,S
R2239 T3519 T3520 dep which,permits
R2240 T3520 T3515 relcl permits,S

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T3360 17-32 SO:0000984 denotes single-stranded
T3361 50-57 CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group denotes thymine
T3362 106-113 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T3363 117-121 PR_EXT:000010246 denotes Mcm4
T3364 117-125 GO:0097373 denotes Mcm4/6/7
T3365 136-140 CHEBI_SO_EXT:DNA denotes DNAs
T3366 155-163 GO_EXT:0004518 denotes nuclease
T3367 188-195 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T3368 213-217 CHEBI_SO_EXT:DNA denotes DNAs
T3369 222-226 PR_EXT:000010246 denotes Mcm4
T3370 222-230 GO:0097373 denotes Mcm4/6/7
T3371 250-257 CHEBI:27575 denotes ATP-γ-S

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T3309 17-32 SO:0000984 denotes single-stranded
T3310 117-121 PR:000010246 denotes Mcm4
T3311 117-125 GO:0097373 denotes Mcm4/6/7
T3312 222-226 PR:000010246 denotes Mcm4
T3313 222-230 GO:0097373 denotes Mcm4/6/7
T3314 250-257 CHEBI:27575 denotes ATP-γ-S

2_test

Id Subject Object Predicate Lexical cue
15917436-14609960-76775508 69-71 14609960 denotes 13