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PMC:1134658 / 9791-9941 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5690 0-1 CD denotes 4
T5691 1-2 -RRB- denotes )
T5692 3-4 -LRB- denotes (
T5693 4-10 NN denotes Figure
T5694 11-12 CD denotes 8
T5695 13-16 CC denotes and
T5696 17-18 CD denotes 9
T5697 18-19 -RRB- denotes )
T5698 21-23 IN denotes In
T5699 24-28 NN denotes line
T5700 29-33 IN denotes with
T5701 34-37 DT denotes the
T5702 38-42 NN denotes mRNA
T5703 43-47 NN denotes data
T5704 47-48 -COMMA- denotes ,
T5705 49-51 DT denotes no
T5706 52-62 JJ denotes consistent
T5707 63-69 NN denotes change
T5708 70-72 IN denotes in
T5709 73-76 DT denotes the
T5710 77-84 NN denotes amounts
T5711 85-87 IN denotes of
T5712 88-91 NN denotes Id2
T5713 92-95 CC denotes and
T5714 96-99 NN denotes Id3
T5715 100-107 NN denotes protein
T5716 108-113 MD denotes could
T5717 114-116 VB denotes be
T5718 117-125 VB denotes observed
T5719 126-127 -LRB- denotes (
T5720 127-133 NN denotes Figure
T5721 134-135 CD denotes 8
T5722 136-139 CC denotes and
T5723 140-141 CD denotes 9
T5724 141-142 -RRB- denotes )
T5725 144-146 PRP denotes We
R4480 T5693 T5694 arg1Of Figure,8
R4481 T5693 T5695 arg1Of Figure,and
R4482 T5695 T5692 arg2Of and,(
R4483 T5696 T5695 arg2Of 9,and
R4484 T5697 T5692 arg3Of ),(
R4485 T5699 T5698 arg2Of line,In
R4486 T5699 T5700 arg1Of line,with
R4487 T5703 T5700 arg2Of data,with
R4488 T5703 T5701 arg1Of data,the
R4489 T5703 T5702 arg1Of data,mRNA
R4490 T5707 T5705 arg1Of change,no
R4491 T5707 T5706 arg1Of change,consistent
R4492 T5707 T5708 arg1Of change,in
R4493 T5707 T5716 arg1Of change,could
R4494 T5707 T5717 arg1Of change,be
R4495 T5707 T5718 arg2Of change,observed
R4496 T5710 T5708 arg2Of amounts,in
R4497 T5710 T5709 arg1Of amounts,the
R4498 T5710 T5711 arg1Of amounts,of
R4499 T5712 T5713 arg1Of Id2,and
R4500 T5714 T5713 arg2Of Id3,and
R4501 T5715 T5711 arg2Of protein,of
R4502 T5715 T5712 arg1Of protein,Id2
R4503 T5715 T5714 arg1Of protein,Id3
R4504 T5718 T5698 arg1Of observed,In
R4505 T5718 T5704 arg1Of observed,","
R4506 T5718 T5716 arg2Of observed,could
R4507 T5718 T5717 arg2Of observed,be
R4508 T5718 T5719 arg1Of observed,(
R4509 T5720 T5721 arg1Of Figure,8
R4510 T5720 T5722 arg1Of Figure,and
R4511 T5722 T5719 arg2Of and,(
R4512 T5723 T5722 arg2Of 9,and
R4513 T5724 T5719 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6088 0-1 LS denotes 4
T6089 1-2 -RRB- denotes )
T6090 3-4 -LRB- denotes (
T6091 4-10 NN denotes Figure
T6092 11-12 CD denotes 8
T6093 13-16 CC denotes and
T6094 17-18 CD denotes 9
T6095 18-19 -RRB- denotes )
T6096 19-20 . denotes .
T6097 21-23 IN denotes In
T6098 24-28 NN denotes line
T6099 29-33 IN denotes with
T6100 34-37 DT denotes the
T6101 38-42 NNP denotes mRNA
T6102 43-47 NNS denotes data
T6103 47-48 , denotes ,
T6104 49-51 DT denotes no
T6105 52-62 JJ denotes consistent
T6106 63-69 NN denotes change
T6107 70-72 IN denotes in
T6108 73-76 DT denotes the
T6109 77-84 NNS denotes amounts
T6110 85-87 IN denotes of
T6111 88-91 JJ denotes Id2
T6112 92-95 CC denotes and
T6113 96-99 JJ denotes Id3
T6114 100-107 NN denotes protein
T6115 108-113 MD denotes could
T6116 114-116 VB denotes be
T6117 117-125 VBN denotes observed
T6118 126-127 -LRB- denotes (
T6119 127-133 NN denotes Figure
T6120 134-135 CD denotes 8
T6121 136-139 CC denotes and
T6122 140-141 CD denotes 9
T6123 141-142 -RRB- denotes )
T6124 142-143 . denotes .
T6125 144-146 PRP denotes We
R4808 T6089 T6088 punct ),4
R4809 T6090 T6091 punct (,Figure
R4811 T6092 T6091 nummod 8,Figure
R4812 T6093 T6092 cc and,8
R4813 T6094 T6092 conj 9,8
R4814 T6095 T6091 punct ),Figure
R4816 T6097 T6117 prep In,observed
R4817 T6098 T6097 pobj line,In
R4818 T6099 T6098 prep with,line
R4819 T6100 T6102 det the,data
R4820 T6101 T6102 compound mRNA,data
R4821 T6102 T6099 pobj data,with
R4822 T6103 T6117 punct ",",observed
R4823 T6104 T6106 det no,change
R4824 T6105 T6106 amod consistent,change
R4825 T6106 T6117 nsubjpass change,observed
R4826 T6107 T6106 prep in,change
R4827 T6108 T6109 det the,amounts
R4828 T6109 T6107 pobj amounts,in
R4829 T6110 T6109 prep of,amounts
R4830 T6111 T6114 amod Id2,protein
R4831 T6112 T6111 cc and,Id2
R4832 T6113 T6111 conj Id3,Id2
R4833 T6114 T6110 pobj protein,of
R4834 T6115 T6117 aux could,observed
R4835 T6116 T6117 auxpass be,observed
R4836 T6117 T6117 ROOT observed,observed
R4837 T6118 T6119 punct (,Figure
R4838 T6119 T6119 ROOT Figure,Figure
R4839 T6120 T6119 nummod 8,Figure
R4840 T6121 T6120 cc and,8
R4841 T6122 T6120 conj 9,8
R4842 T6123 T6119 punct ),Figure
R4843 T6124 T6117 punct .,observed

sentences

Id Subject Object Predicate Lexical cue
T5453 21-143 Sentence denotes In line with the mRNA data, no consistent change in the amounts of Id2 and Id3 protein could be observed (Figure 8 and 9).
T81 21-143 Sentence denotes In line with the mRNA data, no consistent change in the amounts of Id2 and Id3 protein could be observed (Figure 8 and 9).

events-check-again

Id Subject Object Predicate Lexical cue Negation
T6369 63-69 Regulation denotes change true
T6370 63-69 Regulation denotes change true
T6371 77-84 Gene_expression denotes amounts
T6372 77-84 Gene_expression denotes amounts
T6373 88-91 Protein denotes Id2
T6374 96-99 Protein denotes Id3
R5035 T6371 T6370 themeOf amounts,change
R5036 T6372 T6369 themeOf amounts,change
R5037 T6373 T6372 themeOf Id2,amounts
R5038 T6374 T6371 themeOf Id3,amounts

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6211 63-69 Regulation denotes change
T6212 63-69 Regulation denotes change
T6213 88-91 Protein denotes Id2
T6214 96-107 Protein denotes Id3 protein
R4909 T6213 T6211 themeOf Id2,change
R4910 T6214 T6212 themeOf Id3 protein,change

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T5431 63-69 Regulation denotes change true
T5432 63-69 Regulation denotes change true
T5433 77-84 Gene_expression denotes amounts
T5434 77-84 Gene_expression denotes amounts
T5435 88-91 Protein denotes Id2
T5436 96-99 Protein denotes Id3
R4237 T5433 T5432 themeOf amounts,change
R4238 T5434 T5431 themeOf amounts,change
R4239 T5435 T5434 themeOf Id2,amounts
R4240 T5436 T5433 themeOf Id3,amounts

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5825 88-91 Q02363 denotes Id2
T5826 96-99 Q02535 denotes Id3

test2

Id Subject Object Predicate Lexical cue
T5379 63-69 Regulation denotes change
T5380 88-91 Protein denotes Id2
T5381 96-99 Protein denotes Id3
R4193 T5380 T5379 themeOf Id2,change
R4194 T5381 T5379 themeOf Id3,change

tees-test

Id Subject Object Predicate Lexical cue
T1143 38-42 D012333 denotes mRNA
T1144 38-42 CHEBI:33699 denotes mRNA
T1145 38-42 SO:0000234 denotes mRNA
T1146 88-91 C039556 denotes Id2
T1147 88-91 C039556 denotes Id2
T1148 88-91 PR:000000040 denotes Id2
T1149 88-91 PR:P41137 denotes Id2
T1150 88-91 PR:Q02363 denotes Id2
T1151 88-91 PR:P41136 denotes Id2
T1152 96-99 PR:P41133 denotes Id3
T1153 96-99 PR:P41138 denotes Id3
T1154 96-99 PR:Q02535 denotes Id3
T1155 96-99 PR:000000041 denotes Id3
T1156 100-107 CHEBI:36080 denotes protein
T1157 100-107 CHEBI:11122 denotes protein
T1158 100-107 SO:0000104 denotes protein
T1159 100-107 PR:000000001 denotes protein
T1160 100-107 GO:0003675 denotes protein