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PMC:1134658 / 9266-9489
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5598 | 2-10 | NN | denotes | addition |
T5599 | 11-13 | IN | denotes | of |
T5600 | 14-19 | NN | denotes | BMP-6 |
T5601 | 20-23 | CC | denotes | and |
T5602 | 24-32 | VB | denotes | returned |
T5603 | 33-35 | TO | denotes | to |
T5604 | 36-44 | NN | denotes | baseline |
T5605 | 45-50 | IN | denotes | after |
T5606 | 51-53 | CD | denotes | 24 |
T5607 | 54-59 | NN | denotes | hours |
T5608 | 61-63 | IN | denotes | In |
T5609 | 64-72 | NN | denotes | contrast |
T5610 | 72-73 | -COMMA- | denotes | , |
T5611 | 74-76 | DT | denotes | no |
T5612 | 77-88 | JJ | denotes | significant |
T5613 | 89-96 | NN | denotes | changes |
T5614 | 97-101 | VB | denotes | were |
T5615 | 102-110 | VB | denotes | observed |
T5616 | 111-114 | IN | denotes | for |
T5617 | 115-118 | NN | denotes | Id2 |
T5618 | 119-122 | CC | denotes | and |
T5619 | 123-126 | NN | denotes | Id3 |
T5620 | 127-131 | NN | denotes | mRNA |
T5621 | 131-132 | -COMMA- | denotes | , |
T5622 | 133-140 | IN | denotes | whereas |
T5623 | 141-156 | NN | denotes | Id4-transcripts |
T5624 | 157-161 | VB | denotes | were |
T5625 | 162-165 | RB | denotes | not |
T5626 | 166-176 | JJ | denotes | detectable |
T5627 | 177-178 | -LRB- | denotes | ( |
T5628 | 178-184 | NN | denotes | Figure |
T5629 | 185-186 | CD | denotes | 7 |
T5630 | 186-187 | -COMMA- | denotes | , |
T5631 | 188-192 | NN | denotes | data |
T5632 | 193-196 | RB | denotes | not |
T5633 | 197-202 | VB | denotes | shown |
T5634 | 202-203 | -RRB- | denotes | ) |
T5635 | 205-212 | NN | denotes | Western |
T5636 | 213-217 | NN | denotes | blot |
R4384 | T5598 | T5599 | arg1Of | addition,of |
R4385 | T5600 | T5599 | arg2Of | BMP-6,of |
R4386 | T5602 | T5601 | arg2Of | returned,and |
R4387 | T5602 | T5603 | arg1Of | returned,to |
R4388 | T5602 | T5605 | arg1Of | returned,after |
R4389 | T5604 | T5603 | arg2Of | baseline,to |
R4390 | T5607 | T5605 | arg2Of | hours,after |
R4391 | T5607 | T5606 | arg1Of | hours,24 |
R4392 | T5609 | T5608 | arg2Of | contrast,In |
R4393 | T5613 | T5611 | arg1Of | changes,no |
R4394 | T5613 | T5612 | arg1Of | changes,significant |
R4395 | T5613 | T5614 | arg1Of | changes,were |
R4396 | T5613 | T5615 | arg2Of | changes,observed |
R4397 | T5615 | T5608 | arg1Of | observed,In |
R4398 | T5615 | T5610 | arg1Of | observed,"," |
R4399 | T5615 | T5614 | arg2Of | observed,were |
R4400 | T5615 | T5616 | arg1Of | observed,for |
R4401 | T5615 | T5621 | arg1Of | observed,"," |
R4402 | T5615 | T5622 | arg1Of | observed,whereas |
R4403 | T5617 | T5618 | arg1Of | Id2,and |
R4404 | T5619 | T5618 | arg2Of | Id3,and |
R4405 | T5620 | T5616 | arg2Of | mRNA,for |
R4406 | T5620 | T5617 | arg1Of | mRNA,Id2 |
R4407 | T5620 | T5619 | arg1Of | mRNA,Id3 |
R4408 | T5623 | T5624 | arg1Of | Id4-transcripts,were |
R4409 | T5623 | T5626 | arg1Of | Id4-transcripts,detectable |
R4410 | T5624 | T5622 | arg2Of | were,whereas |
R4411 | T5624 | T5625 | arg1Of | were,not |
R4412 | T5626 | T5624 | arg2Of | detectable,were |
R4413 | T5626 | T5627 | arg1Of | detectable,( |
R4414 | T5628 | T5629 | arg1Of | Figure,7 |
R4415 | T5628 | T5630 | arg1Of | Figure,"," |
R4416 | T5630 | T5627 | arg2Of | ",",( |
R4417 | T5630 | T5633 | arg2Of | ",",shown |
R4418 | T5631 | T5630 | arg2Of | data,"," |
R4419 | T5633 | T5632 | arg1Of | shown,not |
R4420 | T5634 | T5627 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5993 | 2-10 | NN | denotes | addition |
T5994 | 11-13 | IN | denotes | of |
T5995 | 14-19 | NNP | denotes | BMP-6 |
T5996 | 20-23 | CC | denotes | and |
T5997 | 24-32 | VBD | denotes | returned |
T5998 | 33-35 | TO | denotes | to |
T5999 | 36-44 | NN | denotes | baseline |
T6000 | 45-50 | IN | denotes | after |
T6001 | 51-53 | CD | denotes | 24 |
T6002 | 54-59 | NNS | denotes | hours |
T6003 | 59-60 | . | denotes | . |
T6004 | 61-63 | IN | denotes | In |
T6005 | 64-72 | NN | denotes | contrast |
T6006 | 72-73 | , | denotes | , |
T6007 | 74-76 | DT | denotes | no |
T6008 | 77-88 | JJ | denotes | significant |
T6009 | 89-96 | NNS | denotes | changes |
T6010 | 97-101 | VBD | denotes | were |
T6011 | 102-110 | VBN | denotes | observed |
T6012 | 111-114 | IN | denotes | for |
T6013 | 115-118 | NNP | denotes | Id2 |
T6014 | 119-122 | CC | denotes | and |
T6015 | 123-126 | NNP | denotes | Id3 |
T6016 | 127-131 | NNP | denotes | mRNA |
T6017 | 131-132 | , | denotes | , |
T6018 | 133-140 | IN | denotes | whereas |
T6019 | 141-156 | NNS | denotes | Id4-transcripts |
T6020 | 157-161 | VBD | denotes | were |
T6021 | 162-165 | RB | denotes | not |
T6022 | 166-176 | JJ | denotes | detectable |
T6023 | 177-178 | -LRB- | denotes | ( |
T6024 | 178-184 | NN | denotes | Figure |
T6025 | 185-186 | CD | denotes | 7 |
T6026 | 186-187 | , | denotes | , |
T6027 | 188-192 | NNS | denotes | data |
T6028 | 193-196 | RB | denotes | not |
T6029 | 197-202 | VBN | denotes | shown |
T6030 | 202-203 | -RRB- | denotes | ) |
T6031 | 203-204 | . | denotes | . |
T6032 | 205-212 | JJ | denotes | Western |
T6033 | 213-217 | NN | denotes | blot |
R4713 | T5994 | T5993 | prep | of,addition |
R4714 | T5995 | T5994 | pobj | BMP-6,of |
R4717 | T5998 | T5997 | prep | to,returned |
R4718 | T5999 | T5998 | pobj | baseline,to |
R4719 | T6000 | T5997 | prep | after,returned |
R4720 | T6001 | T6002 | nummod | 24,hours |
R4721 | T6002 | T6000 | pobj | hours,after |
R4723 | T6004 | T6011 | prep | In,observed |
R4724 | T6005 | T6004 | pobj | contrast,In |
R4725 | T6006 | T6011 | punct | ",",observed |
R4726 | T6007 | T6009 | det | no,changes |
R4727 | T6008 | T6009 | amod | significant,changes |
R4728 | T6009 | T6011 | nsubjpass | changes,observed |
R4729 | T6010 | T6011 | auxpass | were,observed |
R4730 | T6011 | T6011 | ROOT | observed,observed |
R4731 | T6012 | T6011 | prep | for,observed |
R4732 | T6013 | T6012 | pobj | Id2,for |
R4733 | T6014 | T6013 | cc | and,Id2 |
R4734 | T6015 | T6016 | compound | Id3,mRNA |
R4735 | T6016 | T6013 | conj | mRNA,Id2 |
R4736 | T6017 | T6011 | punct | ",",observed |
R4737 | T6018 | T6020 | mark | whereas,were |
R4738 | T6019 | T6020 | nsubj | Id4-transcripts,were |
R4739 | T6020 | T6011 | advcl | were,observed |
R4740 | T6021 | T6020 | neg | not,were |
R4741 | T6022 | T6020 | acomp | detectable,were |
R4742 | T6023 | T6024 | punct | (,Figure |
R4743 | T6024 | T6020 | prep | Figure,were |
R4744 | T6025 | T6024 | nummod | 7,Figure |
R4745 | T6026 | T6024 | punct | ",",Figure |
R4746 | T6027 | T6024 | appos | data,Figure |
R4747 | T6028 | T6029 | neg | not,shown |
R4748 | T6029 | T6027 | acl | shown,data |
R4749 | T6030 | T6024 | punct | ),Figure |
R4750 | T6031 | T6011 | punct | .,observed |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5450 | 61-204 | Sentence | denotes | In contrast, no significant changes were observed for Id2 and Id3 mRNA, whereas Id4-transcripts were not detectable (Figure 7, data not shown). |
T78 | 61-204 | Sentence | denotes | In contrast, no significant changes were observed for Id2 and Id3 mRNA, whereas Id4-transcripts were not detectable (Figure 7, data not shown). |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T6350 | 14-19 | Protein | denotes | BMP-6 | |
T6351 | 89-96 | Regulation | denotes | changes | true |
T6352 | 89-96 | Regulation | denotes | changes | true |
T6353 | 115-118 | Protein | denotes | Id2 | |
T6354 | 123-126 | Protein | denotes | Id3 | |
T6355 | 141-144 | Protein | denotes | Id4 | |
T6356 | 166-176 | Positive_regulation | denotes | detectable | true |
R5015 | T6350 | T6351 | causeOf | BMP-6,changes | |
R5016 | T6350 | T6352 | causeOf | BMP-6,changes | |
R5017 | T6350 | T6356 | causeOf | BMP-6,detectable | |
R5018 | T6353 | T6351 | themeOf | Id2,changes | |
R5019 | T6354 | T6352 | themeOf | Id3,changes | |
R5020 | T6355 | T6356 | themeOf | Id4,detectable |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6198 | 14-19 | Protein | denotes | BMP-6 |
T6199 | 89-96 | Regulation | denotes | changes |
T6200 | 89-96 | Regulation | denotes | changes |
T6201 | 115-118 | Protein | denotes | Id2 |
T6202 | 123-131 | Protein | denotes | Id3 mRNA |
T6203 | 166-176 | Gene_expression | denotes | detectable |
T6204 | 166-176 | Gene_expression | denotes | detectable |
R4902 | T6201 | T6199 | themeOf | Id2,changes |
R4903 | T6201 | T6203 | themeOf | Id2,detectable |
R4904 | T6202 | T6200 | themeOf | Id3 mRNA,changes |
R4905 | T6202 | T6204 | themeOf | Id3 mRNA,detectable |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T5416 | 123-126 | Protein | denotes | Id3 | |
T5417 | 141-144 | Protein | denotes | Id4 | |
T5418 | 166-176 | Positive_regulation | denotes | detectable | true |
T5412 | 14-19 | Protein | denotes | BMP-6 | |
T5413 | 89-96 | Regulation | denotes | changes | true |
T5414 | 89-96 | Regulation | denotes | changes | true |
T5415 | 115-118 | Protein | denotes | Id2 | |
R4219 | T5412 | T5418 | causeOf | BMP-6,detectable | |
R4220 | T5415 | T5413 | themeOf | Id2,changes | |
R4221 | T5416 | T5414 | themeOf | Id3,changes | |
R4222 | T5417 | T5418 | themeOf | Id4,detectable | |
R4217 | T5412 | T5413 | causeOf | BMP-6,changes | |
R4218 | T5412 | T5414 | causeOf | BMP-6,changes |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5804 | 14-17 | P12643 | denotes | BMP |
T5805 | 14-17 | P18075 | denotes | BMP |
T5806 | 14-17 | P22004 | denotes | BMP |
T5807 | 14-17 | P12644 | denotes | BMP |
T5808 | 14-19 | P22004 | denotes | BMP-6 |
T5809 | 115-118 | Q02363 | denotes | Id2 |
T5810 | 123-126 | Q02535 | denotes | Id3 |
T5811 | 141-144 | P47928 | denotes | Id4 |
test2
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T5364 | 14-19 | Protein | denotes | BMP-6 | |
T5365 | 115-118 | Protein | denotes | Id2 | |
T5366 | 123-126 | Protein | denotes | Id3 | true |
T5367 | 141-144 | Protein | denotes | Id4 |
tees-test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1070 | 14-19 | Q04906 | denotes | BMP-6 |
T1071 | 14-19 | PR:000000167 | denotes | BMP-6 |
T1072 | 14-19 | P20722 | denotes | BMP-6 |
T1073 | 14-19 | PR:Q04906 | denotes | BMP-6 |
T1074 | 14-19 | P22004 | denotes | BMP-6 |
T1075 | 14-19 | PR:P22004 | denotes | BMP-6 |
T1076 | 14-19 | PR:P20722 | denotes | BMP-6 |
T1077 | 14-19 | D055418 | denotes | BMP-6 |
T1078 | 14-19 | D055418 | denotes | BMP-6 |
T1079 | 115-118 | PR:000000040 | denotes | Id2 |
T1080 | 115-118 | PR:P41137 | denotes | Id2 |
T1081 | 115-118 | PR:Q02363 | denotes | Id2 |
T1082 | 115-118 | PR:P41136 | denotes | Id2 |
T1083 | 115-118 | C039556 | denotes | Id2 |
T1084 | 115-118 | C039556 | denotes | Id2 |
T1085 | 123-126 | PR:P41133 | denotes | Id3 |
T1086 | 123-126 | PR:P41138 | denotes | Id3 |
T1087 | 123-126 | PR:Q02535 | denotes | Id3 |
T1088 | 123-126 | PR:000000041 | denotes | Id3 |
T1089 | 127-131 | D012333 | denotes | mRNA |
T1090 | 127-131 | CHEBI:33699 | denotes | mRNA |
T1091 | 127-131 | SO:0000234 | denotes | mRNA |
T1092 | 141-144 | PR:P47928 | denotes | Id4 |
T1093 | 141-144 | PR:P41139 | denotes | Id4 |
T1094 | 141-144 | PR:000000042 | denotes | Id4 |
T1095 | 193-202 | 32644 | denotes | not shown |