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PMC:1134658 / 9109-9265 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5571 2-15 JJ denotes BMP-6-treated
T5572 16-17 NN denotes B
T5573 18-23 NN denotes cells
T5574 24-25 -LRB- denotes (
T5575 25-31 NN denotes Figure
T5576 32-33 CD denotes 7
T5577 33-34 -RRB- denotes )
T5578 36-39 DT denotes The
T5579 40-53 NN denotes up-regulation
T5580 54-56 IN denotes of
T5581 57-60 NN denotes Id1
T5582 61-65 NN denotes mRNA
T5583 66-69 VB denotes was
T5584 70-84 JJ denotes characteristic
T5585 85-87 IN denotes of
T5586 88-90 DT denotes an
T5587 91-96 JJ denotes early
T5588 97-106 JJ denotes inducible
T5589 107-111 NN denotes gene
T5590 111-112 -COMMA- denotes ,
T5591 113-117 IN denotes with
T5592 118-125 JJ denotes maximal
T5593 126-138 NN denotes upregulation
T5594 139-142 CD denotes two
T5595 143-148 NN denotes hours
T5596 149-154 IN denotes after
R4355 T5573 T5571 arg1Of cells,BMP-6-treated
R4356 T5573 T5572 arg1Of cells,B
R4357 T5573 T5574 arg1Of cells,(
R4358 T5575 T5574 arg2Of Figure,(
R4359 T5575 T5576 arg1Of Figure,7
R4360 T5577 T5574 arg3Of ),(
R4361 T5579 T5578 arg1Of up-regulation,The
R4362 T5579 T5580 arg1Of up-regulation,of
R4363 T5579 T5583 arg1Of up-regulation,was
R4364 T5579 T5584 arg1Of up-regulation,characteristic
R4366 T5582 T5580 arg2Of mRNA,of
R4367 T5582 T5581 arg1Of mRNA,Id1
R4368 T5583 T5590 arg1Of was,","
R4369 T5583 T5591 arg1Of was,with
R4370 T5583 T5596 arg1Of was,after
R4372 T5584 T5583 arg2Of characteristic,was
R4373 T5584 T5585 arg1Of characteristic,of
R4374 T5589 T5585 arg2Of gene,of
R4375 T5589 T5586 arg1Of gene,an
R4376 T5589 T5587 arg1Of gene,early
R4377 T5589 T5588 arg1Of gene,inducible
R4378 T5595 T5591 arg2Of hours,with
R4379 T5595 T5592 arg1Of hours,maximal
R4380 T5595 T5593 arg1Of hours,upregulation
R4381 T5595 T5594 arg1Of hours,two

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5965 2-15 NNP denotes BMP-6-treated
T5966 16-17 NNP denotes B
T5967 18-23 NNS denotes cells
T5968 24-25 -LRB- denotes (
T5969 25-31 NN denotes Figure
T5970 32-33 CD denotes 7
T5971 33-34 -RRB- denotes )
T5972 34-35 . denotes .
T5973 36-39 DT denotes The
T5974 40-53 NN denotes up-regulation
T5975 54-56 IN denotes of
T5976 57-60 NNP denotes Id1
T5977 61-65 NNP denotes mRNA
T5978 66-69 VBD denotes was
T5979 70-84 JJ denotes characteristic
T5980 85-87 IN denotes of
T5981 88-90 DT denotes an
T5982 91-96 JJ denotes early
T5983 97-106 JJ denotes inducible
T5984 107-111 NN denotes gene
T5985 111-112 , denotes ,
T5986 113-117 IN denotes with
T5987 118-125 JJ denotes maximal
T5988 126-138 NN denotes upregulation
T5989 139-142 CD denotes two
T5990 143-148 NNS denotes hours
T5991 149-154 IN denotes after
R4684 T5965 T5966 compound BMP-6-treated,B
R4685 T5966 T5967 compound B,cells
R4687 T5968 T5969 punct (,Figure
R4689 T5970 T5969 nummod 7,Figure
R4690 T5971 T5969 punct ),Figure
R4692 T5973 T5974 det The,up-regulation
R4693 T5974 T5978 nsubj up-regulation,was
R4694 T5975 T5974 prep of,up-regulation
R4695 T5976 T5977 compound Id1,mRNA
R4696 T5977 T5975 pobj mRNA,of
R4697 T5978 T5978 ROOT was,was
R4698 T5979 T5978 acomp characteristic,was
R4699 T5980 T5979 prep of,characteristic
R4700 T5981 T5984 det an,gene
R4701 T5982 T5984 amod early,gene
R4702 T5983 T5984 compound inducible,gene
R4703 T5984 T5980 pobj gene,of
R4704 T5985 T5984 punct ",",gene
R4705 T5986 T5979 prep with,characteristic
R4706 T5987 T5988 amod maximal,upregulation
R4707 T5988 T5986 pobj upregulation,with
R4708 T5989 T5990 nummod two,hours
R4709 T5990 T5991 npadvmod hours,after
R4710 T5991 T5978 prep after,was

GO-BP

Id Subject Object Predicate Lexical cue
T5460 43-53 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation

GO-CC

Id Subject Object Predicate Lexical cue
T6184 18-23 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

events-check-again

Id Subject Object Predicate Lexical cue
T6346 2-7 Protein denotes BMP-6
T6347 40-53 Positive_regulation denotes up-regulation
T6348 57-60 Protein denotes Id1
T6349 126-138 Positive_regulation denotes upregulation
R5011 T6348 T6347 themeOf Id1,up-regulation
R5012 T6348 T6349 themeOf Id1,upregulation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6196 40-53 Positive_regulation denotes up-regulation
T6197 57-65 Protein denotes Id1 mRNA
R4901 T6197 T6196 themeOf Id1 mRNA,up-regulation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T5408 2-7 Protein denotes BMP-6
T5409 40-53 Positive_regulation denotes up-regulation
T5410 57-60 Protein denotes Id1
T5411 126-138 Positive_regulation denotes upregulation
R4213 T5410 T5409 themeOf Id1,up-regulation
R4214 T5410 T5411 themeOf Id1,upregulation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5798 2-5 P12643 denotes BMP
T5799 2-5 P12644 denotes BMP
T5800 2-5 P18075 denotes BMP
T5801 2-5 P22004 denotes BMP
T5802 2-7 P22004 denotes BMP-6
T5803 57-60 P41134 denotes Id1

test2

Id Subject Object Predicate Lexical cue
T5360 2-7 Protein denotes BMP-6
T5361 40-53 Positive_regulation denotes up-regulation
T5362 57-60 Protein denotes Id1
T5363 126-138 Positive_regulation denotes upregulation
R4178 T5362 T5363 themeOf Id1,upregulation
R4179 T5362 T5361 themeOf Id1,up-regulation

tees-test

Id Subject Object Predicate Lexical cue
T1052 2-7 Q04906 denotes BMP-6
T1053 2-7 PR:000000167 denotes BMP-6
T1054 2-7 P20722 denotes BMP-6
T1055 2-7 PR:Q04906 denotes BMP-6
T1056 2-7 P22004 denotes BMP-6
T1057 2-7 PR:P22004 denotes BMP-6
T1058 2-7 PR:P20722 denotes BMP-6
T1059 2-7 D055418 denotes BMP-6
T1060 2-7 D055418 denotes BMP-6
T1061 43-53 GO:0065007 denotes regulation
T1062 57-60 PR:P41134 denotes Id1
T1063 57-60 PR:P20067 denotes Id1
T1064 57-60 PR:P41135 denotes Id1
T1065 57-60 PR:000000039 denotes Id1
T1066 61-65 D012333 denotes mRNA
T1067 61-65 CHEBI:33699 denotes mRNA
T1068 61-65 SO:0000234 denotes mRNA
T1069 107-111 SO:0000704 denotes gene