PMC:1134658 / 8795-8971 JSONTXT

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/1134658","sourcedb":"PMC","sourceid":"1134658","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1134658","text":"Thus, B cells were pre-incubated over night in X-VIVO 15, and then cultured in medium alone or in the presence of BMP-6 for various time points before preparation of total RNA.","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T5516","span":{"begin":0,"end":4},"obj":"RB"},{"id":"T5517","span":{"begin":4,"end":5},"obj":"-COMMA-"},{"id":"T5518","span":{"begin":6,"end":7},"obj":"NN"},{"id":"T5519","span":{"begin":8,"end":13},"obj":"NN"},{"id":"T5520","span":{"begin":14,"end":18},"obj":"VB"},{"id":"T5521","span":{"begin":19,"end":32},"obj":"JJ"},{"id":"T5522","span":{"begin":33,"end":37},"obj":"IN"},{"id":"T5523","span":{"begin":38,"end":43},"obj":"NN"},{"id":"T5524","span":{"begin":44,"end":46},"obj":"IN"},{"id":"T5525","span":{"begin":47,"end":53},"obj":"NN"},{"id":"T5526","span":{"begin":54,"end":56},"obj":"CD"},{"id":"T5527","span":{"begin":56,"end":57},"obj":"-COMMA-"},{"id":"T5528","span":{"begin":58,"end":61},"obj":"CC"},{"id":"T5529","span":{"begin":62,"end":66},"obj":"RB"},{"id":"T5530","span":{"begin":67,"end":75},"obj":"VB"},{"id":"T5531","span":{"begin":76,"end":78},"obj":"IN"},{"id":"T5532","span":{"begin":79,"end":85},"obj":"NN"},{"id":"T5533","span":{"begin":86,"end":91},"obj":"RB"},{"id":"T5534","span":{"begin":92,"end":94},"obj":"CC"},{"id":"T5535","span":{"begin":95,"end":97},"obj":"IN"},{"id":"T5536","span":{"begin":98,"end":101},"obj":"DT"},{"id":"T5537","span":{"begin":102,"end":110},"obj":"NN"},{"id":"T5538","span":{"begin":111,"end":113},"obj":"IN"},{"id":"T5539","span":{"begin":114,"end":119},"obj":"NN"},{"id":"T5540","span":{"begin":120,"end":123},"obj":"IN"},{"id":"T5541","span":{"begin":124,"end":131},"obj":"JJ"},{"id":"T5542","span":{"begin":132,"end":136},"obj":"NN"},{"id":"T5543","span":{"begin":137,"end":143},"obj":"NN"},{"id":"T5544","span":{"begin":144,"end":150},"obj":"IN"},{"id":"T5545","span":{"begin":151,"end":162},"obj":"NN"},{"id":"T5546","span":{"begin":163,"end":165},"obj":"IN"},{"id":"T5547","span":{"begin":166,"end":171},"obj":"JJ"},{"id":"T5548","span":{"begin":172,"end":175},"obj":"NN"}],"relations":[{"id":"R4298","pred":"arg1Of","subj":"T5519","obj":"T5518"},{"id":"R4299","pred":"arg1Of","subj":"T5519","obj":"T5520"},{"id":"R4300","pred":"arg2Of","subj":"T5519","obj":"T5521"},{"id":"R4301","pred":"arg2Of","subj":"T5519","obj":"T5530"},{"id":"R4302","pred":"arg1Of","subj":"T5521","obj":"T5522"},{"id":"R4303","pred":"arg1Of","subj":"T5521","obj":"T5524"},{"id":"R4304","pred":"arg1Of","subj":"T5521","obj":"T5528"},{"id":"R4305","pred":"arg2Of","subj":"T5523","obj":"T5522"},{"id":"R4306","pred":"arg2Of","subj":"T5525","obj":"T5524"},{"id":"R4307","pred":"arg1Of","subj":"T5525","obj":"T5526"},{"id":"R4308","pred":"arg1Of","subj":"T5528","obj":"T5516"},{"id":"R4309","pred":"arg1Of","subj":"T5528","obj":"T5517"},{"id":"R4310","pred":"arg2Of","subj":"T5528","obj":"T5520"},{"id":"R4311","pred":"arg1Of","subj":"T5528","obj":"T5527"},{"id":"R4312","pred":"arg2Of","subj":"T5530","obj":"T5528"},{"id":"R4313","pred":"arg1Of","subj":"T5530","obj":"T5529"},{"id":"R4314","pred":"arg1Of","subj":"T5530","obj":"T5531"},{"id":"R4315","pred":"arg1Of","subj":"T5530","obj":"T5544"},{"id":"R4316","pred":"arg2Of","subj":"T5532","obj":"T5531"},{"id":"R4317","pred":"arg1Of","subj":"T5532","obj":"T5533"},{"id":"R4318","pred":"arg1Of","subj":"T5532","obj":"T5535"},{"id":"R4319","pred":"arg1Of","subj":"T5532","obj":"T5540"},{"id":"R4320","pred":"arg1Of","subj":"T5533","obj":"T5534"},{"id":"R4321","pred":"arg2Of","subj":"T5535","obj":"T5534"},{"id":"R4322","pred":"arg2Of","subj":"T5537","obj":"T5535"},{"id":"R4323","pred":"arg1Of","subj":"T5537","obj":"T5536"},{"id":"R4324","pred":"arg1Of","subj":"T5537","obj":"T5538"},{"id":"R4325","pred":"arg2Of","subj":"T5539","obj":"T5538"},{"id":"R4326","pred":"arg2Of","subj":"T5543","obj":"T5540"},{"id":"R4327","pred":"arg1Of","subj":"T5543","obj":"T5541"},{"id":"R4328","pred":"arg1Of","subj":"T5543","obj":"T5542"},{"id":"R4329","pred":"arg2Of","subj":"T5545","obj":"T5544"},{"id":"R4330","pred":"arg1Of","subj":"T5545","obj":"T5546"},{"id":"R4331","pred":"arg2Of","subj":"T5548","obj":"T5546"},{"id":"R4332","pred":"arg1Of","subj":"T5548","obj":"T5547"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T5516","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5517","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5518","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5519","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5520","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5521","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5522","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5523","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5524","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5525","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5526","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5527","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5528","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5529","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5530","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5531","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5532","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5533","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5534","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5535","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5536","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5537","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5538","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5539","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5540","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5541","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5542","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5543","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5544","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5545","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5546","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5547","pred":"source","obj":"pmc-enju-pas"},{"subj":"T5548","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T5938","span":{"begin":166,"end":171},"obj":"JJ"},{"id":"T5907","span":{"begin":0,"end":4},"obj":"RB"},{"id":"T5908","span":{"begin":4,"end":5},"obj":","},{"id":"T5909","span":{"begin":6,"end":7},"obj":"NNP"},{"id":"T5910","span":{"begin":8,"end":13},"obj":"NNS"},{"id":"T5911","span":{"begin":14,"end":18},"obj":"VBD"},{"id":"T5912","span":{"begin":19,"end":32},"obj":"VBN"},{"id":"T5913","span":{"begin":33,"end":37},"obj":"IN"},{"id":"T5914","span":{"begin":38,"end":43},"obj":"NN"},{"id":"T5915","span":{"begin":44,"end":46},"obj":"IN"},{"id":"T5916","span":{"begin":47,"end":53},"obj":"NNP"},{"id":"T5917","span":{"begin":54,"end":56},"obj":"CD"},{"id":"T5918","span":{"begin":56,"end":57},"obj":","},{"id":"T5919","span":{"begin":58,"end":61},"obj":"CC"},{"id":"T5920","span":{"begin":62,"end":66},"obj":"RB"},{"id":"T5921","span":{"begin":67,"end":75},"obj":"VBD"},{"id":"T5922","span":{"begin":76,"end":78},"obj":"IN"},{"id":"T5923","span":{"begin":79,"end":85},"obj":"NN"},{"id":"T5924","span":{"begin":86,"end":91},"obj":"RB"},{"id":"T5925","span":{"begin":92,"end":94},"obj":"CC"},{"id":"T5926","span":{"begin":95,"end":97},"obj":"IN"},{"id":"T5927","span":{"begin":98,"end":101},"obj":"DT"},{"id":"T5928","span":{"begin":102,"end":110},"obj":"NN"},{"id":"T5929","span":{"begin":111,"end":113},"obj":"IN"},{"id":"T5930","span":{"begin":114,"end":119},"obj":"NNP"},{"id":"T5931","span":{"begin":120,"end":123},"obj":"IN"},{"id":"T5932","span":{"begin":124,"end":131},"obj":"JJ"},{"id":"T5933","span":{"begin":132,"end":136},"obj":"NN"},{"id":"T5934","span":{"begin":137,"end":143},"obj":"NNS"},{"id":"T5935","span":{"begin":144,"end":150},"obj":"IN"},{"id":"T5936","span":{"begin":151,"end":162},"obj":"NN"},{"id":"T5937","span":{"begin":163,"end":165},"obj":"IN"},{"id":"T5939","span":{"begin":172,"end":175},"obj":"NNP"},{"id":"T5940","span":{"begin":175,"end":176},"obj":"."}],"relations":[{"id":"R4626","pred":"advmod","subj":"T5907","obj":"T5912"},{"id":"R4627","pred":"punct","subj":"T5908","obj":"T5912"},{"id":"R4628","pred":"compound","subj":"T5909","obj":"T5910"},{"id":"R4629","pred":"nsubjpass","subj":"T5910","obj":"T5912"},{"id":"R4630","pred":"auxpass","subj":"T5911","obj":"T5912"},{"id":"R4631","pred":"ROOT","subj":"T5912","obj":"T5912"},{"id":"R4632","pred":"prep","subj":"T5913","obj":"T5912"},{"id":"R4633","pred":"pobj","subj":"T5914","obj":"T5913"},{"id":"R4634","pred":"prep","subj":"T5915","obj":"T5912"},{"id":"R4635","pred":"pobj","subj":"T5916","obj":"T5915"},{"id":"R4636","pred":"nummod","subj":"T5917","obj":"T5916"},{"id":"R4637","pred":"punct","subj":"T5918","obj":"T5912"},{"id":"R4638","pred":"cc","subj":"T5919","obj":"T5912"},{"id":"R4639","pred":"advmod","subj":"T5920","obj":"T5921"},{"id":"R4640","pred":"conj","subj":"T5921","obj":"T5912"},{"id":"R4641","pred":"prep","subj":"T5922","obj":"T5921"},{"id":"R4642","pred":"pobj","subj":"T5923","obj":"T5922"},{"id":"R4643","pred":"advmod","subj":"T5924","obj":"T5921"},{"id":"R4644","pred":"cc","subj":"T5925","obj":"T5921"},{"id":"R4645","pred":"conj","subj":"T5926","obj":"T5921"},{"id":"R4646","pred":"det","subj":"T5927","obj":"T5928"},{"id":"R4647","pred":"pobj","subj":"T5928","obj":"T5926"},{"id":"R4648","pred":"prep","subj":"T5929","obj":"T5928"},{"id":"R4649","pred":"pobj","subj":"T5930","obj":"T5929"},{"id":"R4650","pred":"prep","subj":"T5931","obj":"T5921"},{"id":"R4651","pred":"amod","subj":"T5932","obj":"T5934"},{"id":"R4652","pred":"compound","subj":"T5933","obj":"T5934"},{"id":"R4653","pred":"pobj","subj":"T5934","obj":"T5931"},{"id":"R4654","pred":"prep","subj":"T5935","obj":"T5921"},{"id":"R4655","pred":"pobj","subj":"T5936","obj":"T5935"},{"id":"R4656","pred":"prep","subj":"T5937","obj":"T5936"},{"id":"R4657","pred":"amod","subj":"T5938","obj":"T5939"},{"id":"R4658","pred":"pobj","subj":"T5939","obj":"T5937"},{"id":"R4659","pred":"punct","subj":"T5940","obj":"T5912"}],"attributes":[{"subj":"T5938","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5907","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5908","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5909","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5910","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5911","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5912","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5913","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5914","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5915","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5916","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5917","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5918","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5919","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5920","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5921","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5922","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5923","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5924","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5925","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5926","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5927","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5928","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5929","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5930","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5931","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5932","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5933","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5934","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5935","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5936","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5937","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5939","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T5940","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-CC","denotations":[{"id":"T6183","span":{"begin":8,"end":13},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T6183","pred":"source","obj":"GO-CC"}]},{"project":"sentences","denotations":[{"id":"T5446","span":{"begin":0,"end":176},"obj":"Sentence"},{"id":"T74","span":{"begin":0,"end":176},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T5446","pred":"source","obj":"sentences"},{"subj":"T74","pred":"source","obj":"sentences"}]},{"project":"events-check-again","denotations":[{"id":"T6341","span":{"begin":114,"end":119},"obj":"Protein"}],"attributes":[{"subj":"T6341","pred":"source","obj":"events-check-again"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T6192","span":{"begin":114,"end":119},"obj":"Protein"}],"attributes":[{"subj":"T6192","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T5403","span":{"begin":114,"end":119},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T5403","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T5790","span":{"begin":114,"end":117},"obj":"P18075"},{"id":"T5791","span":{"begin":114,"end":117},"obj":"P12644"},{"id":"T5792","span":{"begin":114,"end":117},"obj":"P12643"},{"id":"T5793","span":{"begin":114,"end":117},"obj":"P22004"},{"id":"T5794","span":{"begin":114,"end":119},"obj":"P22004"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T5790","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T5791","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T5792","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T5793","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T5794","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T5355","span":{"begin":114,"end":119},"obj":"Protein"}],"attributes":[{"subj":"T5355","pred":"source","obj":"test2"}]},{"project":"tees-test","denotations":[{"id":"T1006","span":{"begin":19,"end":22},"obj":"GO:0003904"},{"id":"T1007","span":{"begin":19,"end":22},"obj":"PR:Q8LLD0"},{"id":"T1008","span":{"begin":19,"end":22},"obj":"SO:0002045"},{"id":"T1009","span":{"begin":19,"end":22},"obj":"UBERON:0001782"},{"id":"T1010","span":{"begin":114,"end":119},"obj":"Q04906"},{"id":"T1011","span":{"begin":114,"end":119},"obj":"PR:000000167"},{"id":"T1012","span":{"begin":114,"end":119},"obj":"P20722"},{"id":"T1013","span":{"begin":114,"end":119},"obj":"PR:Q04906"},{"id":"T1014","span":{"begin":114,"end":119},"obj":"P22004"},{"id":"T1015","span":{"begin":114,"end":119},"obj":"PR:P22004"},{"id":"T1016","span":{"begin":114,"end":119},"obj":"PR:P20722"},{"id":"T1017","span":{"begin":114,"end":119},"obj":"D055418"},{"id":"T1018","span":{"begin":114,"end":119},"obj":"D055418"},{"id":"T1019","span":{"begin":172,"end":175},"obj":"SO:0000356"},{"id":"T1020","span":{"begin":172,"end":175},"obj":"CHEBI:33697"},{"id":"T1021","span":{"begin":172,"end":175},"obj":"D012313"},{"id":"T1022","span":{"begin":172,"end":175},"obj":"GO:0005562"}],"attributes":[{"subj":"T1006","pred":"source","obj":"tees-test"},{"subj":"T1007","pred":"source","obj":"tees-test"},{"subj":"T1008","pred":"source","obj":"tees-test"},{"subj":"T1009","pred":"source","obj":"tees-test"},{"subj":"T1010","pred":"source","obj":"tees-test"},{"subj":"T1011","pred":"source","obj":"tees-test"},{"subj":"T1012","pred":"source","obj":"tees-test"},{"subj":"T1013","pred":"source","obj":"tees-test"},{"subj":"T1014","pred":"source","obj":"tees-test"},{"subj":"T1015","pred":"source","obj":"tees-test"},{"subj":"T1016","pred":"source","obj":"tees-test"},{"subj":"T1017","pred":"source","obj":"tees-test"},{"subj":"T1018","pred":"source","obj":"tees-test"},{"subj":"T1019","pred":"source","obj":"tees-test"},{"subj":"T1020","pred":"source","obj":"tees-test"},{"subj":"T1021","pred":"source","obj":"tees-test"},{"subj":"T1022","pred":"source","obj":"tees-test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#ec93ae","default":true},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93c8ec"},{"id":"GO-CC","color":"#e2ec93"},{"id":"sentences","color":"#dc93ec"},{"id":"events-check-again","color":"#93ecc2"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#eca893"},{"id":"bionlp-st-ge-2016-reference","color":"#9398ec"},{"id":"bionlp-st-ge-2016-uniprot","color":"#b2ec93"},{"id":"test2","color":"#ec93cc"},{"id":"tees-test","color":"#93e6ec"}]}]}}