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PMC:1134658 / 8528-8737 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5470 2-4 TO denotes to
T5471 5-12 VB denotes explore
T5472 13-20 IN denotes whether
T5473 21-24 DT denotes the
T5474 25-30 NN denotes BMP-6
T5475 31-38 VB denotes induced
T5476 39-54 NN denotes phosphorylation
T5477 55-57 IN denotes of
T5478 58-62 NN denotes Smad
T5479 63-68 CD denotes 1/5/8
T5480 69-73 RB denotes also
T5481 74-79 MD denotes could
T5482 80-86 VB denotes induce
T5483 87-102 JJ denotes transcriptional
T5484 103-110 NN denotes changes
T5485 111-113 IN denotes of
T5486 114-120 NN denotes target
T5487 121-126 NN denotes genes
T5488 128-130 IN denotes In
T5489 131-135 DT denotes this
T5490 136-142 NN denotes regard
T5491 142-143 -COMMA- denotes ,
T5492 144-147 DT denotes the
T5493 148-158 NN denotes inhibitors
T5494 159-161 IN denotes of
T5495 162-165 NN denotes DNA
T5496 166-173 NN denotes binding
T5497 174-182 NN denotes proteins
T5498 183-184 -LRB- denotes (
T5499 184-187 NN denotes Ids
T5500 187-188 -RRB- denotes )
T5501 189-192 VB denotes are
T5502 193-203 VB denotes considered
T5503 204-206 TO denotes to
T5504 207-209 VB denotes be
R4251 T5471 T5470 arg1Of explore,to
R4252 T5471 T5472 arg1Of explore,whether
R4253 T5475 T5474 arg1Of induced,BMP-6
R4254 T5476 T5473 arg1Of phosphorylation,the
R4255 T5476 T5475 arg1Of phosphorylation,induced
R4256 T5476 T5477 arg1Of phosphorylation,of
R4257 T5476 T5481 arg1Of phosphorylation,could
R4258 T5476 T5482 arg1Of phosphorylation,induce
R4259 T5478 T5477 arg2Of Smad,of
R4260 T5478 T5479 arg1Of Smad,1/5/8
R4261 T5482 T5472 arg2Of induce,whether
R4262 T5482 T5480 arg1Of induce,also
R4263 T5482 T5481 arg2Of induce,could
R4264 T5484 T5482 arg2Of changes,induce
R4265 T5484 T5483 arg1Of changes,transcriptional
R4266 T5484 T5485 arg1Of changes,of
R4267 T5487 T5485 arg2Of genes,of
R4268 T5487 T5486 arg1Of genes,target
R4269 T5490 T5488 arg2Of regard,In
R4270 T5490 T5489 arg1Of regard,this
R4271 T5493 T5492 arg1Of inhibitors,the
R4272 T5493 T5494 arg1Of inhibitors,of
R4273 T5493 T5501 arg1Of inhibitors,are
R4274 T5493 T5502 arg2Of inhibitors,considered
R4275 T5493 T5504 arg1Of inhibitors,be
R4276 T5497 T5494 arg2Of proteins,of
R4277 T5497 T5495 arg1Of proteins,DNA
R4278 T5497 T5496 arg1Of proteins,binding
R4279 T5497 T5498 arg1Of proteins,(
R4280 T5499 T5498 arg2Of Ids,(
R4281 T5500 T5498 arg3Of ),(
R4282 T5502 T5488 arg1Of considered,In
R4283 T5502 T5491 arg1Of considered,","
R4284 T5502 T5501 arg2Of considered,are
R4285 T5504 T5502 arg3Of be,considered
R4286 T5504 T5503 arg1Of be,to

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5859 2-4 TO denotes to
T5860 5-12 VB denotes explore
T5861 13-20 IN denotes whether
T5862 21-24 DT denotes the
T5863 25-30 NNP denotes BMP-6
T5864 31-38 VBD denotes induced
T5865 39-54 NN denotes phosphorylation
T5866 55-57 IN denotes of
T5867 58-62 NNP denotes Smad
T5868 63-68 CD denotes 1/5/8
T5869 69-73 RB denotes also
T5870 74-79 MD denotes could
T5871 80-86 VB denotes induce
T5872 87-102 JJ denotes transcriptional
T5873 103-110 NNS denotes changes
T5874 111-113 IN denotes of
T5875 114-120 NN denotes target
T5876 121-126 NNS denotes genes
T5877 126-127 . denotes .
T5878 128-130 IN denotes In
T5879 131-135 DT denotes this
T5880 136-142 NN denotes regard
T5881 142-143 , denotes ,
T5882 144-147 DT denotes the
T5883 148-158 NNS denotes inhibitors
T5884 159-161 IN denotes of
T5885 162-165 NNP denotes DNA
T5886 166-173 JJ denotes binding
T5887 174-182 NNS denotes proteins
T5888 183-184 -LRB- denotes (
T5889 184-187 NNP denotes Ids
T5890 187-188 -RRB- denotes )
T5891 189-192 VBP denotes are
T5892 193-203 VBN denotes considered
T5893 204-206 TO denotes to
T5894 207-209 VB denotes be
R4578 T5859 T5860 aux to,explore
R4580 T5861 T5864 mark whether,induced
R4581 T5862 T5863 det the,BMP-6
R4582 T5863 T5864 nsubj BMP-6,induced
R4584 T5865 T5864 dobj phosphorylation,induced
R4585 T5866 T5865 prep of,phosphorylation
R4586 T5867 T5868 compound Smad,1/5/8
R4587 T5868 T5866 pobj 1/5/8,of
R4588 T5869 T5871 advmod also,induce
R4589 T5870 T5871 aux could,induce
R4592 T5873 T5871 dobj changes,induce
R4593 T5874 T5873 prep of,changes
R4594 T5875 T5876 compound target,genes
R4595 T5876 T5874 pobj genes,of
R4597 T5878 T5892 prep In,considered
R4598 T5879 T5880 det this,regard
R4599 T5880 T5878 pobj regard,In
R4600 T5881 T5892 punct ",",considered
R4601 T5882 T5883 det the,inhibitors
R4602 T5883 T5892 nsubjpass inhibitors,considered
R4603 T5884 T5883 prep of,inhibitors
R4604 T5885 T5884 pobj DNA,of
R4605 T5886 T5887 amod binding,proteins
R4606 T5887 T5883 conj proteins,inhibitors
R4607 T5888 T5889 punct (,Ids
R4608 T5889 T5887 appos Ids,proteins
R4609 T5890 T5887 punct ),proteins
R4610 T5891 T5892 auxpass are,considered
R4611 T5892 T5892 ROOT considered,considered
R4612 T5893 T5894 aux to,be
R4613 T5894 T5892 xcomp be,considered
R4591 T5872 T5873 amod transcriptional,changes

GO-BP

Id Subject Object Predicate Lexical cue
T5456 39-54 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T5457 87-102 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional

GO-MF

Id Subject Object Predicate Lexical cue
T6179 162-173 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T6180 166-173 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T6181 166-182 http://purl.obolibrary.org/obo/GO_0005515 denotes binding proteins

events-check-again

Id Subject Object Predicate Lexical cue
T6331 25-30 Protein denotes BMP-6
T6332 31-38 Positive_regulation denotes induced
T6333 31-38 Positive_regulation denotes induced
T6334 31-38 Positive_regulation denotes induced
T6335 39-54 Phosphorylation denotes phosphorylation
T6336 39-54 Phosphorylation denotes phosphorylation
T6337 39-54 Phosphorylation denotes phosphorylation
T6338 58-64 Protein denotes Smad 1
T6339 65-66 Protein denotes 5
T6340 67-68 Protein denotes 8
R5000 T6331 T6333 causeOf BMP-6,induced
R5001 T6331 T6332 causeOf BMP-6,induced
R5002 T6331 T6334 causeOf BMP-6,induced
R5003 T6335 T6334 themeOf phosphorylation,induced
R5004 T6336 T6332 themeOf phosphorylation,induced
R5005 T6337 T6333 themeOf phosphorylation,induced
R5006 T6338 T6336 themeOf Smad 1,phosphorylation
R5007 T6339 T6335 themeOf 5,phosphorylation
R5008 T6340 T6337 themeOf 8,phosphorylation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6186 25-30 Protein denotes BMP-6
T6187 148-158 Negative_regulation denotes inhibitors
T6188 148-158 Negative_regulation denotes inhibitors
T6189 162-182 Protein denotes DNA binding proteins
T6190 184-187 Protein denotes Ids
R4898 T6189 T6187 themeOf DNA binding proteins,inhibitors
R4899 T6190 T6188 themeOf Ids,inhibitors

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T5393 25-30 Protein denotes BMP-6
T5394 31-38 Positive_regulation denotes induced
T5395 31-38 Positive_regulation denotes induced
T5396 31-38 Positive_regulation denotes induced
T5397 39-54 Phosphorylation denotes phosphorylation
T5398 39-54 Phosphorylation denotes phosphorylation
T5399 39-54 Phosphorylation denotes phosphorylation
T5400 58-64 Protein denotes Smad 1
T5401 65-66 Protein denotes 5
T5402 67-68 Protein denotes 8
R4202 T5393 T5395 causeOf BMP-6,induced
R4203 T5393 T5394 causeOf BMP-6,induced
R4204 T5393 T5396 causeOf BMP-6,induced
R4205 T5397 T5396 themeOf phosphorylation,induced
R4206 T5398 T5394 themeOf phosphorylation,induced
R4207 T5399 T5395 themeOf phosphorylation,induced
R4208 T5400 T5398 themeOf Smad 1,phosphorylation
R4209 T5401 T5397 themeOf 5,phosphorylation
R4210 T5402 T5399 themeOf 8,phosphorylation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5783 25-28 P12644 denotes BMP
T5784 25-28 P18075 denotes BMP
T5785 25-28 P12643 denotes BMP
T5786 25-28 P22004 denotes BMP
T5787 25-30 P22004 denotes BMP-6
T5788 58-64 Q15797 denotes Smad 1
T5789 184-187 P41134 denotes Ids

test2

Id Subject Object Predicate Lexical cue
T5349 25-30 Protein denotes BMP-6
T5350 31-38 Positive_regulation denotes induced
T5351 39-54 Phosphorylation denotes phosphorylation
T5352 58-64 Protein denotes Smad 1
T5353 65-66 Protein denotes 5
T5354 67-68 Protein denotes 8
R4171 T5349 T5350 causeOf BMP-6,induced
R4172 T5351 T5350 themeOf phosphorylation,induced
R4173 T5352 T5351 themeOf Smad 1,phosphorylation
R4174 T5353 T5351 themeOf 5,phosphorylation
R4175 T5354 T5351 themeOf 8,phosphorylation

tees-test

Id Subject Object Predicate Lexical cue
T974 25-30 D055418 denotes BMP-6
T975 25-30 D055418 denotes BMP-6
T976 25-30 Q04906 denotes BMP-6
T977 25-30 PR:000000167 denotes BMP-6
T978 25-30 P20722 denotes BMP-6
T979 25-30 PR:Q04906 denotes BMP-6
T980 25-30 P22004 denotes BMP-6
T981 25-30 PR:P22004 denotes BMP-6
T982 25-30 PR:P20722 denotes BMP-6
T983 39-54 GO:0016310 denotes phosphorylation
T984 58-64 PR:Q9I8V2 denotes Smad 1
T985 58-64 PR:P97588 denotes Smad 1
T986 58-64 Q15797 denotes Smad 1
T987 58-64 PR:000000363 denotes Smad 1
T988 58-64 PR:P70340 denotes Smad 1
T989 58-64 P70340 denotes Smad 1
T990 58-64 Q9I962 denotes Smad 1
T991 58-64 PR:Q15797 denotes Smad 1
T992 58-64 P97588 denotes Smad 1
T993 58-64 Q9I8V2 denotes Smad 1
T994 58-64 Q1JQA2 denotes Smad 1
T995 148-158 CHEBI:35222 denotes inhibitors
T996 162-165 GO:0005574 denotes DNA
T997 162-165 SO:0000352 denotes DNA
T998 162-173 GO:0003677 denotes DNA binding
T999 162-182 D004268 denotes DNA binding proteins
T1000 166-173 SO:0100018 denotes binding
T1001 166-173 SO:0001091 denotes binding
T1002 184-187 PR:Q08890 denotes Ids
T1003 184-187 PR:000008894 denotes Ids
T1004 184-187 PR:P22304 denotes Ids