PMC:1134658 / 7751-7886
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4699 | 0-5 | JJ | denotes | Total |
T4700 | 6-13 | NN | denotes | protein |
T4701 | 14-21 | NN | denotes | lysates |
T4702 | 22-26 | VB | denotes | were |
T4703 | 27-35 | VB | denotes | prepared |
T4704 | 35-36 | -COMMA- | denotes | , |
T4705 | 37-40 | CC | denotes | and |
T4706 | 41-44 | DT | denotes | the |
T4707 | 45-52 | NN | denotes | amounts |
T4708 | 53-55 | IN | denotes | of |
T4709 | 56-59 | DT | denotes | the |
T4710 | 60-74 | JJ | denotes | phosphorylated |
T4711 | 75-80 | NN | denotes | forms |
T4712 | 81-83 | IN | denotes | of |
T4713 | 84-93 | NN | denotes | Smad1/5/8 |
T4714 | 94-98 | VB | denotes | were |
T4715 | 99-109 | VB | denotes | determined |
T4716 | 110-112 | IN | denotes | by |
T4717 | 113-120 | NN | denotes | western |
T4718 | 121-125 | NN | denotes | blot |
T4719 | 126-134 | NN | denotes | analysis |
R3637 | T4701 | T4699 | arg1Of | lysates,Total |
R3638 | T4701 | T4700 | arg1Of | lysates,protein |
R3639 | T4701 | T4702 | arg1Of | lysates,were |
R3640 | T4701 | T4703 | arg2Of | lysates,prepared |
R3641 | T4703 | T4702 | arg2Of | prepared,were |
R3642 | T4703 | T4705 | arg1Of | prepared,and |
R3643 | T4705 | T4704 | arg1Of | and,"," |
R3644 | T4707 | T4706 | arg1Of | amounts,the |
R3645 | T4707 | T4708 | arg1Of | amounts,of |
R3646 | T4707 | T4714 | arg1Of | amounts,were |
R3647 | T4707 | T4715 | arg2Of | amounts,determined |
R3648 | T4711 | T4708 | arg2Of | forms,of |
R3649 | T4711 | T4709 | arg1Of | forms,the |
R3650 | T4711 | T4710 | arg1Of | forms,phosphorylated |
R3651 | T4711 | T4712 | arg1Of | forms,of |
R3652 | T4713 | T4712 | arg2Of | Smad1/5/8,of |
R3653 | T4715 | T4705 | arg2Of | determined,and |
R3654 | T4715 | T4714 | arg2Of | determined,were |
R3655 | T4719 | T4715 | arg1Of | analysis,determined |
R3656 | T4719 | T4716 | arg2Of | analysis,by |
R3657 | T4719 | T4717 | arg1Of | analysis,western |
R3658 | T4719 | T4718 | arg1Of | analysis,blot |
bionlp-st-ge-2016-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4828 | 84-89 | Antecedent | denotes | Smad1 |
T4829 | 90-91 | Antecedent | denotes | 5 |
T4830 | 92-93 | Antecedent | denotes | 8 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4970 | 0-5 | JJ | denotes | Total |
T4971 | 6-13 | NN | denotes | protein |
T4972 | 14-21 | NNS | denotes | lysates |
T4973 | 22-26 | VBD | denotes | were |
T4974 | 27-35 | VBN | denotes | prepared |
T4975 | 35-36 | , | denotes | , |
T4976 | 37-40 | CC | denotes | and |
T4977 | 41-44 | DT | denotes | the |
T4978 | 45-52 | NNS | denotes | amounts |
T4979 | 53-55 | IN | denotes | of |
T4980 | 56-59 | DT | denotes | the |
T4981 | 60-74 | JJ | denotes | phosphorylated |
T4982 | 75-80 | NNS | denotes | forms |
T4983 | 81-83 | IN | denotes | of |
T4984 | 84-93 | NNS | denotes | Smad1/5/8 |
T4985 | 94-98 | VBD | denotes | were |
T4986 | 99-109 | VBN | denotes | determined |
T4987 | 110-112 | IN | denotes | by |
T4988 | 113-120 | JJ | denotes | western |
T4989 | 121-125 | NN | denotes | blot |
T4990 | 126-134 | NN | denotes | analysis |
T4991 | 134-135 | . | denotes | . |
R3851 | T4970 | T4972 | amod | Total,lysates |
R3852 | T4971 | T4972 | compound | protein,lysates |
R3853 | T4972 | T4973 | nsubj | lysates,were |
R3854 | T4973 | T4973 | ROOT | were,were |
R3855 | T4974 | T4973 | acomp | prepared,were |
R3856 | T4975 | T4974 | punct | ",",prepared |
R3857 | T4976 | T4973 | cc | and,were |
R3858 | T4977 | T4978 | det | the,amounts |
R3859 | T4978 | T4986 | nsubjpass | amounts,determined |
R3860 | T4979 | T4978 | prep | of,amounts |
R3861 | T4980 | T4982 | det | the,forms |
R3862 | T4981 | T4982 | amod | phosphorylated,forms |
R3863 | T4982 | T4979 | pobj | forms,of |
R3864 | T4983 | T4982 | prep | of,forms |
R3865 | T4984 | T4983 | pobj | Smad1/5/8,of |
R3866 | T4985 | T4986 | auxpass | were,determined |
R3867 | T4986 | T4973 | conj | determined,were |
R3868 | T4987 | T4986 | agent | by,determined |
R3869 | T4988 | T4990 | amod | western,analysis |
R3870 | T4989 | T4990 | compound | blot,analysis |
R3871 | T4990 | T4987 | pobj | analysis,by |
R3872 | T4991 | T4986 | punct | .,determined |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4604 | 0-135 | Sentence | denotes | Total protein lysates were prepared, and the amounts of the phosphorylated forms of Smad1/5/8 were determined by western blot analysis. |
T65 | 0-135 | Sentence | denotes | Total protein lysates were prepared, and the amounts of the phosphorylated forms of Smad1/5/8 were determined by western blot analysis. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T5234 | 60-74 | Phosphorylation | denotes | phosphorylated | true |
T5235 | 60-74 | Phosphorylation | denotes | phosphorylated | true |
T5236 | 60-74 | Phosphorylation | denotes | phosphorylated | true |
T5237 | 84-89 | Protein | denotes | Smad1 | |
T5238 | 90-91 | Protein | denotes | 5 | |
T5239 | 92-93 | Protein | denotes | 8 | |
R4082 | T5237 | T5236 | themeOf | Smad1,phosphorylated | |
R4085 | T5238 | T5235 | themeOf | 5,phosphorylated | |
R4088 | T5239 | T5234 | themeOf | 8,phosphorylated |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5128 | 60-74 | Phosphorylation | denotes | phosphorylated |
T5129 | 84-93 | Protein | denotes | Smad1/5/8 |
R3996 | T5129 | T5128 | themeOf | Smad1/5/8,phosphorylated |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Speculation |
---|---|---|---|---|---|
T4575 | 92-93 | Protein | denotes | 8 | |
T4570 | 60-74 | Phosphorylation | denotes | phosphorylated | true |
T4571 | 60-74 | Phosphorylation | denotes | phosphorylated | true |
T4572 | 60-74 | Phosphorylation | denotes | phosphorylated | true |
T4573 | 84-89 | Protein | denotes | Smad1 | |
T4574 | 90-91 | Protein | denotes | 5 | |
R3534 | T4573 | T4572 | themeOf | Smad1,phosphorylated | |
R3537 | T4574 | T4571 | themeOf | 5,phosphorylated | |
R3540 | T4575 | T4570 | themeOf | 8,phosphorylated |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4851 | 84-89 | Q15797 | denotes | Smad1 |
tees-test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T857 | 6-13 | GO:0003675 | denotes | protein |
T858 | 6-13 | CHEBI:36080 | denotes | protein |
T859 | 6-13 | CHEBI:11122 | denotes | protein |
T860 | 6-13 | PR:000000001 | denotes | protein |
T861 | 6-13 | SO:0000104 | denotes | protein |
T862 | 84-89 | PR:Q9I8V2 | denotes | Smad1 |
T863 | 84-89 | PR:P97588 | denotes | Smad1 |
T864 | 84-89 | Q15797 | denotes | Smad1 |
T865 | 84-89 | PR:000000363 | denotes | Smad1 |
T866 | 84-89 | PR:P70340 | denotes | Smad1 |
T867 | 84-89 | P70340 | denotes | Smad1 |
T868 | 84-89 | Q9I962 | denotes | Smad1 |
T869 | 84-89 | PR:Q15797 | denotes | Smad1 |
T870 | 84-89 | P97588 | denotes | Smad1 |
T871 | 84-89 | Q9I8V2 | denotes | Smad1 |
T872 | 84-89 | Q1JQA2 | denotes | Smad1 |