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PMC:1134658 / 668-741 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T298 2-14 NN denotes upregulation
T299 15-17 IN denotes of
T300 18-21 NN denotes Id1
T301 22-26 NN denotes mRNA
T302 27-30 CC denotes and
T303 31-34 NN denotes Id1
T304 35-42 NN denotes protein
T305 42-43 -COMMA- denotes ,
T306 44-51 IN denotes whereas
T307 52-55 NN denotes Id2
T308 56-59 CC denotes and
T309 60-63 NN denotes Id3
R179 T298 T299 arg1Of upregulation,of
R180 T301 T300 arg1Of mRNA,Id1
R181 T301 T302 arg1Of mRNA,and
R182 T302 T299 arg2Of and,of
R183 T304 T302 arg2Of protein,and
R184 T304 T303 arg1Of protein,Id1
R185 T307 T308 arg1Of Id2,and
R186 T309 T308 arg2Of Id3,and

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T613 2-14 NN denotes upregulation
T614 15-17 IN denotes of
T615 18-21 NNP denotes Id1
T616 22-26 NNP denotes mRNA
T617 27-30 CC denotes and
T618 31-34 NNP denotes Id1
T619 35-42 NN denotes protein
T620 42-43 , denotes ,
T621 44-51 IN denotes whereas
T622 52-55 NNP denotes Id2
T623 56-59 CC denotes and
T624 60-63 NNP denotes Id3
R407 T614 T613 prep of,upregulation
R408 T615 T616 compound Id1,mRNA
R409 T616 T614 pobj mRNA,of
R410 T617 T616 cc and,mRNA
R411 T618 T619 compound Id1,protein
R412 T619 T616 conj protein,mRNA
R416 T623 T622 cc and,Id2

events-check-again

Id Subject Object Predicate Lexical cue
T874 2-14 Positive_regulation denotes upregulation
T875 2-14 Positive_regulation denotes upregulation
T876 18-21 Protein denotes Id1
T877 31-34 Protein denotes Id1
T878 52-55 Protein denotes Id2
T879 60-63 Protein denotes Id3
R695 T876 T874 themeOf Id1,upregulation
R696 T877 T875 themeOf Id1,upregulation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T770 2-14 Positive_regulation denotes upregulation
T771 2-14 Positive_regulation denotes upregulation
T772 18-26 Protein denotes Id1 mRNA
T773 31-42 Protein denotes Id1 protein
T774 52-55 Protein denotes Id2
T775 60-63 Protein denotes Id3
R548 T772 T770 themeOf Id1 mRNA,upregulation
R549 T773 T771 themeOf Id1 protein,upregulation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T124 2-14 Positive_regulation denotes upregulation
T125 2-14 Positive_regulation denotes upregulation
T126 18-21 Protein denotes Id1
T127 31-34 Protein denotes Id1
T128 52-55 Protein denotes Id2
T129 60-63 Protein denotes Id3
R658 T126 T124 themeOf Id1,upregulation
R659 T127 T125 themeOf Id1,upregulation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T451 18-21 P41134 denotes Id1
T452 31-34 P41134 denotes Id1
T453 52-55 Q02363 denotes Id2
T454 60-63 Q02535 denotes Id3

test2

Id Subject Object Predicate Lexical cue
T75 2-14 Positive_regulation denotes upregulation
T76 18-21 Protein denotes Id1
T77 31-34 Protein denotes Id1
T78 52-55 Protein denotes Id2
T79 60-63 Protein denotes Id3
R52 T76 T75 themeOf Id1,upregulation
R53 T77 T75 themeOf Id1,upregulation

tees-test

Id Subject Object Predicate Lexical cue
T69 18-21 PR:P41134 denotes Id1
T70 18-21 PR:P20067 denotes Id1
T71 18-21 PR:P41135 denotes Id1
T72 18-21 PR:000000039 denotes Id1
T73 22-26 D012333 denotes mRNA
T74 22-26 CHEBI:33699 denotes mRNA
T75 22-26 SO:0000234 denotes mRNA
T76 31-34 PR:P41134 denotes Id1
T77 31-34 PR:P20067 denotes Id1
T78 31-34 PR:P41135 denotes Id1
T79 31-34 PR:000000039 denotes Id1
T80 35-42 PR:000000001 denotes protein
T81 35-42 CHEBI:36080 denotes protein
T82 35-42 CHEBI:11122 denotes protein
T83 35-42 SO:0000104 denotes protein
T84 35-42 GO:0003675 denotes protein
T85 52-55 PR:000000040 denotes Id2
T86 52-55 PR:P41137 denotes Id2
T87 52-55 PR:Q02363 denotes Id2
T88 52-55 PR:P41136 denotes Id2
T89 52-55 C039556 denotes Id2
T90 52-55 C039556 denotes Id2
T91 60-63 PR:P41133 denotes Id3
T92 60-63 PR:P41138 denotes Id3
T93 60-63 PR:Q02535 denotes Id3
T94 60-63 PR:000000041 denotes Id3