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PMC:1134658 / 3774-3949 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1560 0-11 RB denotes Furthermore
T1561 11-12 -COMMA- denotes ,
T1562 13-16 DT denotes the
T1563 17-27 NN denotes expression
T1564 28-30 IN denotes of
T1565 31-34 NN denotes BMP
T1566 35-44 NN denotes receptors
T1567 45-48 CC denotes and
T1568 49-54 NN denotes BMP-6
T1569 55-62 VB denotes induced
T1570 63-73 NN denotes activation
T1571 74-76 IN denotes of
T1572 77-80 DT denotes the
T1573 81-85 NN denotes Smad
T1574 86-96 NN denotes signalling
T1575 97-104 NN denotes pathway
T1576 105-109 IN denotes with
T1577 110-120 JJ denotes subsequent
T1578 121-131 NN denotes regulation
T1579 132-134 IN denotes of
T1580 135-138 DT denotes the
T1581 139-145 NN denotes target
T1582 146-151 NN denotes genes
T1583 152-159 NN denotes Id1–Id4
T1584 159-160 -COMMA- denotes ,
T1585 161-165 VB denotes were
T1586 166-174 VB denotes resolved
R1270 T1563 T1562 arg1Of expression,the
R1271 T1563 T1564 arg1Of expression,of
R1272 T1563 T1569 arg1Of expression,induced
R1273 T1563 T1585 arg1Of expression,were
R1274 T1563 T1586 arg2Of expression,resolved
R1275 T1566 T1565 arg1Of receptors,BMP
R1276 T1566 T1567 arg1Of receptors,and
R1277 T1567 T1564 arg2Of and,of
R1278 T1568 T1567 arg2Of BMP-6,and
R1279 T1569 T1576 arg1Of induced,with
R1280 T1569 T1584 arg1Of induced,","
R1281 T1570 T1569 arg2Of activation,induced
R1282 T1570 T1571 arg1Of activation,of
R1283 T1575 T1571 arg2Of pathway,of
R1284 T1575 T1572 arg1Of pathway,the
R1285 T1575 T1573 arg1Of pathway,Smad
R1286 T1575 T1574 arg1Of pathway,signalling
R1287 T1578 T1576 arg2Of regulation,with
R1288 T1578 T1577 arg1Of regulation,subsequent
R1289 T1578 T1579 arg1Of regulation,of
R1290 T1583 T1579 arg2Of Id1–Id4,of
R1291 T1583 T1580 arg1Of Id1–Id4,the
R1292 T1583 T1581 arg1Of Id1–Id4,target
R1293 T1583 T1582 arg1Of Id1–Id4,genes
R1294 T1584 T1560 arg1Of ",",Furthermore
R1295 T1584 T1561 arg1Of ",",","
R1296 T1586 T1584 arg2Of resolved,","
R1297 T1586 T1585 arg2Of resolved,were

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T1605 135-151 Anaphor denotes the target genes
T1606 152-155 Antecedent denotes Id1
T1607 156-159 Antecedent denotes Id4
R1318 T1605 T1606 boundBy the target genes,Id1
R1319 T1605 T1607 boundBy the target genes,Id4

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2162 0-11 RB denotes Furthermore
T2163 11-12 , denotes ,
T2164 13-16 DT denotes the
T2165 17-27 NN denotes expression
T2166 28-30 IN denotes of
T2167 31-34 NN denotes BMP
T2168 35-44 NNS denotes receptors
T2169 45-48 CC denotes and
T2170 49-54 NNP denotes BMP-6
T2171 55-62 VBD denotes induced
T2172 63-73 NN denotes activation
T2173 74-76 IN denotes of
T2174 77-80 DT denotes the
T2175 81-85 NNP denotes Smad
T2176 86-96 JJ denotes signalling
T2177 97-104 NN denotes pathway
T2178 105-109 IN denotes with
T2179 110-120 JJ denotes subsequent
T2180 121-131 NN denotes regulation
T2181 132-134 IN denotes of
T2182 135-138 DT denotes the
T2183 139-145 NN denotes target
T2184 146-151 NNS denotes genes
T2185 152-155 VBP denotes Id1
T2186 156-159 NNP denotes Id4
T2187 159-160 , denotes ,
T2188 161-165 VBD denotes were
T2189 166-174 VBN denotes resolved
T2190 174-175 . denotes .
R1800 T2162 T2171 advmod Furthermore,induced
R1801 T2163 T2171 punct ",",induced
R1802 T2164 T2165 det the,expression
R1803 T2165 T2171 nsubj expression,induced
R1805 T2166 T2165 prep of,expression
R1808 T2167 T2168 compound BMP,receptors
R1810 T2168 T2166 pobj receptors,of
R1828 T2169 T2168 cc and,receptors
R1838 T2170 T2171 nsubj BMP-6,induced
R1841 T2171 T2171 ROOT induced,induced
R1843 T2172 T2171 dobj activation,induced
R1844 T2173 T2172 prep of,activation
R1845 T2174 T2177 det the,pathway
R1846 T2175 T2177 nmod Smad,pathway
R1847 T2176 T2177 amod signalling,pathway
R1848 T2177 T2173 pobj pathway,of
R1849 T2178 T2171 prep with,induced
R1880 T2179 T2180 amod subsequent,regulation
R1884 T2180 T2178 pobj regulation,with
R1885 T2181 T2180 prep of,regulation
R1886 T2182 T2184 det the,genes
R1889 T2183 T2184 compound target,genes
R1891 T2184 T2181 pobj genes,of
R1895 T2185 T2186 compound Id1,Id4
R1897 T2186 T2171 npadvmod Id4,induced
R1899 T2187 T2171 punct ",",induced
R1900 T2188 T2189 auxpass were,resolved
R1901 T2189 T2171 conj resolved,induced
R1902 T2190 T2171 punct .,induced

GO-BP

Id Subject Object Predicate Lexical cue
T1069 86-96 http://purl.obolibrary.org/obo/GO_0023052 denotes signalling
T1072 121-131 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T1073 86-104 http://purl.obolibrary.org/obo/GO_0007165 denotes signalling pathway

sentences

Id Subject Object Predicate Lexical cue
T1049 0-175 Sentence denotes Furthermore, the expression of BMP receptors and BMP-6 induced activation of the Smad signalling pathway with subsequent regulation of the target genes Id1–Id4, were resolved.
T32 0-175 Sentence denotes Furthermore, the expression of BMP receptors and BMP-6 induced activation of the Smad signalling pathway with subsequent regulation of the target genes Id1–Id4, were resolved.

events-check-again

Id Subject Object Predicate Lexical cue
T2488 17-27 Gene_expression denotes expression
T2489 49-54 Protein denotes BMP-6
T2490 55-62 Positive_regulation denotes induced
T2491 55-62 Positive_regulation denotes induced
T2492 121-131 Regulation denotes regulation
T2493 121-131 Regulation denotes regulation
T2494 152-155 Protein denotes Id1
T2495 156-159 Protein denotes Id4
R2021 T2488 T2490 causeOf expression,induced
R2022 T2488 T2491 causeOf expression,induced
R2023 T2489 T2488 themeOf BMP-6,expression
R2024 T2492 T2490 themeOf regulation,induced
R2026 T2493 T2491 themeOf regulation,induced
R2027 T2494 T2492 themeOf Id1,regulation
R2028 T2495 T2493 themeOf Id4,regulation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2257 17-27 Gene_expression denotes expression
T2258 17-27 Gene_expression denotes expression
T2259 31-44 Protein denotes BMP receptors
T2260 49-54 Protein denotes BMP-6
T2261 55-62 Positive_regulation denotes induced
T2262 55-62 Positive_regulation denotes induced
T2263 55-62 Positive_regulation denotes induced
T2264 55-62 Positive_regulation denotes induced
T2265 55-62 Positive_regulation denotes induced
T2266 55-62 Positive_regulation denotes induced
T2267 63-73 Positive_regulation denotes activation
T2268 63-73 Positive_regulation denotes activation
T2269 81-85 Protein denotes Smad
T2270 121-131 Regulation denotes regulation
T2271 121-131 Regulation denotes regulation
T2272 152-155 Protein denotes Id1
T2273 156-159 Protein denotes Id4
R1767 T2257 T2263 causeOf expression,induced
R1768 T2257 T2264 causeOf expression,induced
R1769 T2258 T2265 causeOf expression,induced
R1770 T2258 T2266 causeOf expression,induced
R1771 T2259 T2257 themeOf BMP receptors,expression
R1773 T2260 T2258 themeOf BMP-6,expression
R1774 T2260 T2261 causeOf BMP-6,induced
R1775 T2260 T2262 causeOf BMP-6,induced
R1778 T2267 T2263 themeOf activation,induced
R1779 T2267 T2265 themeOf activation,induced
R1780 T2267 T2261 themeOf activation,induced
R1781 T2268 T2264 themeOf activation,induced
R1782 T2268 T2266 themeOf activation,induced
R1783 T2268 T2262 themeOf activation,induced
R1786 T2270 T2267 themeOf regulation,activation
R1788 T2271 T2268 themeOf regulation,activation
R1790 T2272 T2270 themeOf Id1,regulation
R1791 T2273 T2271 themeOf Id4,regulation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1104 17-27 Gene_expression denotes expression
T1105 55-62 Positive_regulation denotes induced
T1106 121-131 Regulation denotes regulation
T1108 55-62 Positive_regulation denotes induced
T1109 121-131 Regulation denotes regulation
T1136 49-54 Protein denotes BMP-6
T1137 152-155 Protein denotes Id1
T1138 156-159 Protein denotes Id4
R794 T1104 T1108 causeOf expression,induced
R795 T1106 T1105 themeOf regulation,induced
R799 T1109 T1108 themeOf regulation,induced
R842 T1136 T1104 themeOf BMP-6,expression
R843 T1137 T1106 themeOf Id1,regulation
R844 T1138 T1109 themeOf Id4,regulation
R793 T1104 T1105 causeOf expression,induced

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1697 31-34 P12644 denotes BMP
T1698 31-34 P22004 denotes BMP
T1699 31-34 P18075 denotes BMP
T1700 31-34 P12643 denotes BMP
T1701 49-52 P18075 denotes BMP
T1702 49-52 P12644 denotes BMP
T1703 49-52 P12643 denotes BMP
T1704 49-52 P22004 denotes BMP
T1705 49-54 P22004 denotes BMP-6
T1706 152-155 P41134 denotes Id1
T1707 156-159 P47928 denotes Id4

tees-test

Id Subject Object Predicate Lexical cue
T422 31-34 PR:000000034 denotes BMP
T423 31-34 P35855 denotes BMP
T424 31-44 D052004 denotes BMP receptors
T425 49-54 D055418 denotes BMP-6
T426 49-54 D055418 denotes BMP-6
T427 49-54 Q04906 denotes BMP-6
T428 49-54 PR:000000167 denotes BMP-6
T429 49-54 P20722 denotes BMP-6
T430 49-54 PR:Q04906 denotes BMP-6
T431 49-54 P22004 denotes BMP-6
T432 49-54 PR:P22004 denotes BMP-6
T433 49-54 PR:P20722 denotes BMP-6
T434 86-104 GO:0007165 denotes signalling pathway
T435 97-104 CHEBI:34922 denotes pathway
T436 121-131 GO:0065007 denotes regulation
T437 152-155 PR:P41134 denotes Id1
T438 152-155 PR:P20067 denotes Id1
T439 152-155 PR:P41135 denotes Id1
T440 152-155 PR:000000039 denotes Id1
T441 156-159 PR:P47928 denotes Id4
T442 156-159 PR:P41139 denotes Id4
T443 156-159 PR:000000042 denotes Id4