PMC:1134658 / 3145-3380
Annnotations
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T1447","span":{"begin":0,"end":5},"obj":"NN"},{"id":"T1448","span":{"begin":6,"end":9},"obj":"MD"},{"id":"T1449","span":{"begin":10,"end":16},"obj":"VB"},{"id":"T1450","span":{"begin":17,"end":24},"obj":"IN"},{"id":"T1451","span":{"begin":25,"end":28},"obj":"DT"},{"id":"T1452","span":{"begin":29,"end":37},"obj":"NN"},{"id":"T1453","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T1454","span":{"begin":41,"end":44},"obj":"DT"},{"id":"T1455","span":{"begin":45,"end":49},"obj":"NN"},{"id":"T1456","span":{"begin":50,"end":51},"obj":"CD"},{"id":"T1457","span":{"begin":52,"end":61},"obj":"NN"},{"id":"T1458","span":{"begin":62,"end":69},"obj":"NNP"},{"id":"T1459","span":{"begin":69,"end":70},"obj":"-COMMA-"},{"id":"T1460","span":{"begin":71,"end":78},"obj":"NN"},{"id":"T1461","span":{"begin":78,"end":79},"obj":"-COMMA-"},{"id":"T1462","span":{"begin":80,"end":83},"obj":"CC"},{"id":"T1463","span":{"begin":84,"end":91},"obj":"NN"},{"id":"T1464","span":{"begin":92,"end":95},"obj":"CC"},{"id":"T1465","span":{"begin":96,"end":99},"obj":"DT"},{"id":"T1466","span":{"begin":100,"end":104},"obj":"NN"},{"id":"T1467","span":{"begin":105,"end":107},"obj":"CD"},{"id":"T1468","span":{"begin":108,"end":117},"obj":"NN"},{"id":"T1469","span":{"begin":118,"end":125},"obj":"NN"},{"id":"T1470","span":{"begin":125,"end":126},"obj":"-COMMA-"},{"id":"T1471","span":{"begin":127,"end":135},"obj":"NN"},{"id":"T1472","span":{"begin":136,"end":139},"obj":"CC"},{"id":"T1473","span":{"begin":140,"end":148},"obj":"NN"},{"id":"T1474","span":{"begin":148,"end":149},"obj":"-COMMA-"},{"id":"T1475","span":{"begin":150,"end":155},"obj":"WDT"},{"id":"T1476","span":{"begin":156,"end":160},"obj":"VB"},{"id":"T1477","span":{"begin":161,"end":163},"obj":"TO"},{"id":"T1478","span":{"begin":164,"end":167},"obj":"DT"},{"id":"T1479","span":{"begin":168,"end":183},"obj":"NN"},{"id":"T1480","span":{"begin":184,"end":186},"obj":"IN"},{"id":"T1481","span":{"begin":187,"end":190},"obj":"DT"},{"id":"T1482","span":{"begin":191,"end":199},"obj":"NN"},{"id":"T1483","span":{"begin":200,"end":205},"obj":"NN"},{"id":"T1484","span":{"begin":206,"end":207},"obj":"-LRB-"},{"id":"T1485","span":{"begin":207,"end":213},"obj":"NN"},{"id":"T1486","span":{"begin":213,"end":214},"obj":"-COMMA-"},{"id":"T1487","span":{"begin":215,"end":221},"obj":"NN"},{"id":"T1488","span":{"begin":221,"end":222},"obj":"-COMMA-"},{"id":"T1489","span":{"begin":223,"end":226},"obj":"CC"},{"id":"T1490","span":{"begin":227,"end":233},"obj":"NN"},{"id":"T1491","span":{"begin":233,"end":234},"obj":"-RRB-"}],"relations":[{"id":"R1157","pred":"arg1Of","subj":"T1447","obj":"T1448"},{"id":"R1158","pred":"arg1Of","subj":"T1447","obj":"T1449"},{"id":"R1159","pred":"arg2Of","subj":"T1449","obj":"T1448"},{"id":"R1160","pred":"arg1Of","subj":"T1449","obj":"T1450"},{"id":"R1161","pred":"arg2Of","subj":"T1452","obj":"T1450"},{"id":"R1162","pred":"arg1Of","subj":"T1452","obj":"T1451"},{"id":"R1163","pred":"arg1Of","subj":"T1452","obj":"T1453"},{"id":"R1164","pred":"arg1Of","subj":"T1452","obj":"T1474"},{"id":"R1165","pred":"arg1Of","subj":"T1452","obj":"T1475"},{"id":"R1166","pred":"arg1Of","subj":"T1452","obj":"T1476"},{"id":"R1167","pred":"arg1Of","subj":"T1457","obj":"T1455"},{"id":"R1168","pred":"arg1Of","subj":"T1457","obj":"T1456"},{"id":"R1169","pred":"arg1Of","subj":"T1458","obj":"T1459"},{"id":"R1170","pred":"arg1Of","subj":"T1459","obj":"T1457"},{"id":"R1171","pred":"arg1Of","subj":"T1459","obj":"T1462"},{"id":"R1172","pred":"arg2Of","subj":"T1460","obj":"T1459"},{"id":"R1173","pred":"arg1Of","subj":"T1462","obj":"T1454"},{"id":"R1174","pred":"arg1Of","subj":"T1462","obj":"T1461"},{"id":"R1175","pred":"arg1Of","subj":"T1462","obj":"T1464"},{"id":"R1176","pred":"arg2Of","subj":"T1463","obj":"T1462"},{"id":"R1177","pred":"arg2Of","subj":"T1464","obj":"T1453"},{"id":"R1178","pred":"arg1Of","subj":"T1468","obj":"T1466"},{"id":"R1179","pred":"arg1Of","subj":"T1468","obj":"T1467"},{"id":"R1180","pred":"arg1Of","subj":"T1469","obj":"T1470"},{"id":"R1181","pred":"arg1Of","subj":"T1470","obj":"T1472"},{"id":"R1182","pred":"arg2Of","subj":"T1471","obj":"T1470"},{"id":"R1183","pred":"arg2Of","subj":"T1472","obj":"T1464"},{"id":"R1184","pred":"arg1Of","subj":"T1472","obj":"T1465"},{"id":"R1185","pred":"arg1Of","subj":"T1472","obj":"T1468"},{"id":"R1186","pred":"arg2Of","subj":"T1473","obj":"T1472"},{"id":"R1187","pred":"arg1Of","subj":"T1476","obj":"T1477"},{"id":"R1188","pred":"arg2Of","subj":"T1479","obj":"T1477"},{"id":"R1189","pred":"arg1Of","subj":"T1479","obj":"T1478"},{"id":"R1190","pred":"arg1Of","subj":"T1479","obj":"T1480"},{"id":"R1191","pred":"arg2Of","subj":"T1483","obj":"T1480"},{"id":"R1192","pred":"arg1Of","subj":"T1483","obj":"T1481"},{"id":"R1193","pred":"arg1Of","subj":"T1483","obj":"T1482"},{"id":"R1194","pred":"arg1Of","subj":"T1483","obj":"T1484"},{"id":"R1195","pred":"arg1Of","subj":"T1485","obj":"T1486"},{"id":"R1196","pred":"arg1Of","subj":"T1486","obj":"T1489"},{"id":"R1197","pred":"arg2Of","subj":"T1487","obj":"T1486"},{"id":"R1198","pred":"arg2Of","subj":"T1489","obj":"T1484"},{"id":"R1199","pred":"arg1Of","subj":"T1489","obj":"T1488"},{"id":"R1200","pred":"arg2Of","subj":"T1490","obj":"T1489"},{"id":"R1201","pred":"arg3Of","subj":"T1491","obj":"T1484"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
bionlp-st-ge-2016-coref
{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T1600","span":{"begin":187,"end":205},"obj":"Anaphor"},{"id":"T1601","span":{"begin":207,"end":213},"obj":"Antecedent"},{"id":"T1602","span":{"begin":215,"end":221},"obj":"Antecedent"},{"id":"T1603","span":{"begin":227,"end":233},"obj":"Antecedent"}],"relations":[{"id":"R1312","pred":"boundBy","subj":"T1600","obj":"T1601"},{"id":"R1313","pred":"boundBy","subj":"T1600","obj":"T1602"},{"id":"R1314","pred":"boundBy","subj":"T1600","obj":"T1603"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2044","span":{"begin":0,"end":5},"obj":"NN"},{"id":"T2045","span":{"begin":6,"end":9},"obj":"MD"},{"id":"T2046","span":{"begin":10,"end":16},"obj":"VB"},{"id":"T2047","span":{"begin":17,"end":24},"obj":"IN"},{"id":"T2048","span":{"begin":25,"end":28},"obj":"DT"},{"id":"T2049","span":{"begin":29,"end":37},"obj":"NN"},{"id":"T2050","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T2051","span":{"begin":41,"end":44},"obj":"DT"},{"id":"T2052","span":{"begin":45,"end":49},"obj":"NN"},{"id":"T2053","span":{"begin":50,"end":51},"obj":"PRP"},{"id":"T2054","span":{"begin":52,"end":61},"obj":"NNS"},{"id":"T2055","span":{"begin":62,"end":69},"obj":"NNP"},{"id":"T2056","span":{"begin":69,"end":70},"obj":","},{"id":"T2057","span":{"begin":71,"end":78},"obj":"NNP"},{"id":"T2058","span":{"begin":78,"end":79},"obj":","},{"id":"T2059","span":{"begin":80,"end":83},"obj":"CC"},{"id":"T2060","span":{"begin":84,"end":91},"obj":"NNP"},{"id":"T2061","span":{"begin":92,"end":95},"obj":"CC"},{"id":"T2062","span":{"begin":96,"end":99},"obj":"DT"},{"id":"T2063","span":{"begin":100,"end":104},"obj":"NN"},{"id":"T2064","span":{"begin":105,"end":107},"obj":"NNP"},{"id":"T2065","span":{"begin":108,"end":117},"obj":"NNS"},{"id":"T2066","span":{"begin":118,"end":125},"obj":"NNP"},{"id":"T2067","span":{"begin":125,"end":126},"obj":","},{"id":"T2068","span":{"begin":127,"end":135},"obj":"NNP"},{"id":"T2069","span":{"begin":136,"end":139},"obj":"CC"},{"id":"T2070","span":{"begin":140,"end":148},"obj":"NNP"},{"id":"T2071","span":{"begin":148,"end":149},"obj":","},{"id":"T2072","span":{"begin":150,"end":155},"obj":"WDT"},{"id":"T2073","span":{"begin":156,"end":160},"obj":"VBP"},{"id":"T2074","span":{"begin":161,"end":163},"obj":"TO"},{"id":"T2075","span":{"begin":164,"end":167},"obj":"DT"},{"id":"T2076","span":{"begin":168,"end":183},"obj":"NN"},{"id":"T2077","span":{"begin":184,"end":186},"obj":"IN"},{"id":"T2078","span":{"begin":187,"end":190},"obj":"DT"},{"id":"T2079","span":{"begin":191,"end":199},"obj":"NN"},{"id":"T2080","span":{"begin":200,"end":205},"obj":"NNS"},{"id":"T2081","span":{"begin":206,"end":207},"obj":"-LRB-"},{"id":"T2082","span":{"begin":207,"end":213},"obj":"NNP"},{"id":"T2083","span":{"begin":213,"end":214},"obj":","},{"id":"T2084","span":{"begin":215,"end":221},"obj":"NNP"},{"id":"T2085","span":{"begin":221,"end":222},"obj":","},{"id":"T2086","span":{"begin":223,"end":226},"obj":"CC"},{"id":"T2087","span":{"begin":227,"end":233},"obj":"NNP"},{"id":"T2088","span":{"begin":233,"end":234},"obj":"-RRB-"},{"id":"T2089","span":{"begin":234,"end":235},"obj":"."}],"relations":[{"id":"R1611","pred":"nsubj","subj":"T2044","obj":"T2046"},{"id":"R1612","pred":"aux","subj":"T2045","obj":"T2046"},{"id":"R1613","pred":"ROOT","subj":"T2046","obj":"T2046"},{"id":"R1615","pred":"prep","subj":"T2047","obj":"T2046"},{"id":"R1616","pred":"det","subj":"T2048","obj":"T2049"},{"id":"R1617","pred":"pobj","subj":"T2049","obj":"T2047"},{"id":"R1618","pred":"prep","subj":"T2050","obj":"T2049"},{"id":"R1619","pred":"det","subj":"T2051","obj":"T2052"},{"id":"R1620","pred":"pobj","subj":"T2052","obj":"T2050"},{"id":"R1623","pred":"nsubj","subj":"T2053","obj":"T2054"},{"id":"R1625","pred":"relcl","subj":"T2054","obj":"T2052"},{"id":"R1627","pred":"dobj","subj":"T2055","obj":"T2054"},{"id":"R1630","pred":"punct","subj":"T2056","obj":"T2055"},{"id":"R1633","pred":"conj","subj":"T2057","obj":"T2055"},{"id":"R1635","pred":"punct","subj":"T2058","obj":"T2057"},{"id":"R1636","pred":"cc","subj":"T2059","obj":"T2057"},{"id":"R1638","pred":"conj","subj":"T2060","obj":"T2057"},{"id":"R1639","pred":"cc","subj":"T2061","obj":"T2060"},{"id":"R1640","pred":"det","subj":"T2062","obj":"T2065"},{"id":"R1642","pred":"compound","subj":"T2063","obj":"T2065"},{"id":"R1643","pred":"compound","subj":"T2064","obj":"T2065"},{"id":"R1644","pred":"conj","subj":"T2065","obj":"T2054"},{"id":"R1646","pred":"npadvmod","subj":"T2066","obj":"T2054"},{"id":"R1647","pred":"punct","subj":"T2067","obj":"T2066"},{"id":"R1648","pred":"conj","subj":"T2068","obj":"T2066"},{"id":"R1650","pred":"cc","subj":"T2069","obj":"T2068"},{"id":"R1651","pred":"conj","subj":"T2070","obj":"T2068"},{"id":"R1653","pred":"punct","subj":"T2071","obj":"T2066"},{"id":"R1654","pred":"nsubj","subj":"T2072","obj":"T2073"},{"id":"R1657","pred":"relcl","subj":"T2073","obj":"T2066"},{"id":"R1658","pred":"prep","subj":"T2074","obj":"T2073"},{"id":"R1659","pred":"det","subj":"T2075","obj":"T2076"},{"id":"R1661","pred":"pobj","subj":"T2076","obj":"T2074"},{"id":"R1662","pred":"prep","subj":"T2077","obj":"T2076"},{"id":"R1663","pred":"det","subj":"T2078","obj":"T2080"},{"id":"R1665","pred":"compound","subj":"T2079","obj":"T2080"},{"id":"R1666","pred":"pobj","subj":"T2080","obj":"T2077"},{"id":"R1667","pred":"punct","subj":"T2081","obj":"T2082"},{"id":"R1668","pred":"appos","subj":"T2082","obj":"T2076"},{"id":"R1669","pred":"punct","subj":"T2083","obj":"T2082"},{"id":"R1670","pred":"conj","subj":"T2084","obj":"T2082"},{"id":"R1672","pred":"punct","subj":"T2085","obj":"T2084"},{"id":"R1673","pred":"cc","subj":"T2086","obj":"T2084"},{"id":"R1674","pred":"conj","subj":"T2087","obj":"T2084"},{"id":"R1675","pred":"punct","subj":"T2088","obj":"T2084"},{"id":"R1677","pred":"punct","subj":"T2089","obj":"T2046"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
UBERON-AE
{"project":"UBERON-AE","denotations":[{"id":"T1033","span":{"begin":88,"end":91},"obj":"http://purl.obolibrary.org/obo/UBERON_0002228"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T1068","span":{"begin":10,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0023052"},{"id":"T1070","span":{"begin":168,"end":183},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
sentences
{"project":"sentences","denotations":[{"id":"T1045","span":{"begin":0,"end":235},"obj":"Sentence"},{"id":"T28","span":{"begin":0,"end":235},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T2441","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T2442","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T2443","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T2444","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T2445","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T2446","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T2447","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T2448","span":{"begin":62,"end":69},"obj":"Protein"},{"id":"T2449","span":{"begin":71,"end":78},"obj":"Protein"},{"id":"T2450","span":{"begin":84,"end":91},"obj":"Protein"},{"id":"T2451","span":{"begin":118,"end":125},"obj":"Protein"},{"id":"T2452","span":{"begin":127,"end":135},"obj":"Protein"},{"id":"T2453","span":{"begin":140,"end":148},"obj":"Protein"},{"id":"T2454","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2455","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2456","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2457","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2458","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2459","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2460","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2461","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2462","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2463","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2464","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2465","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2466","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2467","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2468","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2469","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2470","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2471","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2472","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T2473","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T2474","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T2475","span":{"begin":207,"end":213},"obj":"Protein"},{"id":"T2476","span":{"begin":215,"end":221},"obj":"Protein"},{"id":"T2477","span":{"begin":227,"end":233},"obj":"Protein"}],"relations":[{"id":"R1979","pred":"themeOf","subj":"T2472","obj":"T2455"},{"id":"R1980","pred":"themeOf","subj":"T2472","obj":"T2456"},{"id":"R1981","pred":"themeOf","subj":"T2472","obj":"T2457"},{"id":"R1982","pred":"themeOf","subj":"T2472","obj":"T2458"},{"id":"R1983","pred":"themeOf","subj":"T2472","obj":"T2459"},{"id":"R1984","pred":"themeOf","subj":"T2473","obj":"T2460"},{"id":"R1985","pred":"themeOf","subj":"T2473","obj":"T2461"},{"id":"R1947","pred":"themeOf","subj":"T2441","obj":"T2442"},{"id":"R1948","pred":"themeOf","subj":"T2441","obj":"T2443"},{"id":"R1949","pred":"themeOf","subj":"T2441","obj":"T2444"},{"id":"R1950","pred":"themeOf","subj":"T2441","obj":"T2445"},{"id":"R1951","pred":"themeOf","subj":"T2441","obj":"T2446"},{"id":"R1952","pred":"themeOf","subj":"T2441","obj":"T2447"},{"id":"R1953","pred":"causeOf","subj":"T2442","obj":"T2454"},{"id":"R1954","pred":"causeOf","subj":"T2442","obj":"T2460"},{"id":"R1955","pred":"causeOf","subj":"T2442","obj":"T2466"},{"id":"R1956","pred":"causeOf","subj":"T2443","obj":"T2455"},{"id":"R1957","pred":"causeOf","subj":"T2443","obj":"T2461"},{"id":"R1958","pred":"causeOf","subj":"T2443","obj":"T2467"},{"id":"R1959","pred":"causeOf","subj":"T2444","obj":"T2456"},{"id":"R1960","pred":"causeOf","subj":"T2444","obj":"T2462"},{"id":"R1961","pred":"causeOf","subj":"T2444","obj":"T2468"},{"id":"R1962","pred":"causeOf","subj":"T2445","obj":"T2457"},{"id":"R1963","pred":"causeOf","subj":"T2445","obj":"T2463"},{"id":"R1964","pred":"causeOf","subj":"T2445","obj":"T2469"},{"id":"R1965","pred":"causeOf","subj":"T2446","obj":"T2458"},{"id":"R1966","pred":"causeOf","subj":"T2446","obj":"T2464"},{"id":"R1967","pred":"causeOf","subj":"T2446","obj":"T2470"},{"id":"R1968","pred":"causeOf","subj":"T2447","obj":"T2459"},{"id":"R1969","pred":"causeOf","subj":"T2447","obj":"T2465"},{"id":"R1970","pred":"causeOf","subj":"T2447","obj":"T2471"},{"id":"R1971","pred":"themeOf","subj":"T2448","obj":"T2442"},{"id":"R1972","pred":"themeOf","subj":"T2449","obj":"T2443"},{"id":"R1973","pred":"themeOf","subj":"T2450","obj":"T2444"},{"id":"R1974","pred":"themeOf","subj":"T2451","obj":"T2445"},{"id":"R1975","pred":"themeOf","subj":"T2452","obj":"T2446"},{"id":"R1976","pred":"themeOf","subj":"T2453","obj":"T2447"},{"id":"R1978","pred":"themeOf","subj":"T2472","obj":"T2454"},{"id":"R1986","pred":"themeOf","subj":"T2473","obj":"T2462"},{"id":"R1987","pred":"themeOf","subj":"T2473","obj":"T2463"},{"id":"R1988","pred":"themeOf","subj":"T2473","obj":"T2464"},{"id":"R1989","pred":"themeOf","subj":"T2473","obj":"T2465"},{"id":"R1990","pred":"themeOf","subj":"T2474","obj":"T2466"},{"id":"R1991","pred":"themeOf","subj":"T2474","obj":"T2467"},{"id":"R1992","pred":"themeOf","subj":"T2474","obj":"T2468"},{"id":"R1993","pred":"themeOf","subj":"T2474","obj":"T2469"},{"id":"R1994","pred":"themeOf","subj":"T2474","obj":"T2470"},{"id":"R1995","pred":"themeOf","subj":"T2474","obj":"T2471"},{"id":"R1996","pred":"themeOf","subj":"T2475","obj":"T2472"},{"id":"R2000","pred":"themeOf","subj":"T2476","obj":"T2473"},{"id":"R2003","pred":"themeOf","subj":"T2477","obj":"T2474"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2234","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T2235","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T2236","span":{"begin":45,"end":61},"obj":"Protein"},{"id":"T2237","span":{"begin":100,"end":125},"obj":"Protein"},{"id":"T2238","span":{"begin":127,"end":135},"obj":"Protein"},{"id":"T2239","span":{"begin":140,"end":148},"obj":"Protein"},{"id":"T2240","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2241","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2242","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2243","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T2244","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T2245","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T2246","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T2247","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T2248","span":{"begin":200,"end":205},"obj":"Protein"},{"id":"T2249","span":{"begin":207,"end":213},"obj":"Protein"},{"id":"T2250","span":{"begin":215,"end":221},"obj":"Protein"},{"id":"T2251","span":{"begin":227,"end":233},"obj":"Protein"}],"relations":[{"id":"R1742","pred":"themeOf","subj":"T2234","obj":"T2235"},{"id":"R1743","pred":"causeOf","subj":"T2235","obj":"T2242"},{"id":"R1744","pred":"causeOf","subj":"T2235","obj":"T2243"},{"id":"R1746","pred":"causeOf","subj":"T2235","obj":"T2240"},{"id":"R1747","pred":"causeOf","subj":"T2235","obj":"T2241"},{"id":"R1750","pred":"themeOf","subj":"T2239","obj":"T2235"},{"id":"R1753","pred":"themeOf","subj":"T2244","obj":"T2240"},{"id":"R1754","pred":"themeOf","subj":"T2245","obj":"T2241"},{"id":"R1756","pred":"themeOf","subj":"T2246","obj":"T2242"},{"id":"R1757","pred":"themeOf","subj":"T2247","obj":"T2243"},{"id":"R1758","pred":"themeOf","subj":"T2248","obj":"T2244"},{"id":"R1760","pred":"themeOf","subj":"T2249","obj":"T2245"},{"id":"R1761","pred":"themeOf","subj":"T2250","obj":"T2246"},{"id":"R1762","pred":"themeOf","subj":"T2251","obj":"T2247"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1075","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1076","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T1077","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1078","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1079","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1080","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1081","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1082","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1083","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T1084","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1086","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1087","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1088","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1089","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1090","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1091","span":{"begin":168,"end":183},"obj":"Phosphorylation"},{"id":"T1092","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1093","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1094","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1095","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1097","span":{"begin":156,"end":160},"obj":"Positive_regulation"},{"id":"T1107","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T1111","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T1112","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T1113","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T1114","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T1115","span":{"begin":29,"end":37},"obj":"Binding"},{"id":"T1122","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T1123","span":{"begin":62,"end":69},"obj":"Protein"},{"id":"T1124","span":{"begin":71,"end":78},"obj":"Protein"},{"id":"T1125","span":{"begin":84,"end":91},"obj":"Protein"},{"id":"T1126","span":{"begin":118,"end":125},"obj":"Protein"},{"id":"T1128","span":{"begin":127,"end":135},"obj":"Protein"},{"id":"T1129","span":{"begin":140,"end":148},"obj":"Protein"},{"id":"T1130","span":{"begin":207,"end":213},"obj":"Protein"},{"id":"T1131","span":{"begin":215,"end":221},"obj":"Protein"},{"id":"T1132","span":{"begin":227,"end":233},"obj":"Protein"}],"relations":[{"id":"R775","pred":"themeOf","subj":"T1076","obj":"T1075"},{"id":"R776","pred":"themeOf","subj":"T1076","obj":"T1077"},{"id":"R777","pred":"themeOf","subj":"T1076","obj":"T1078"},{"id":"R778","pred":"themeOf","subj":"T1076","obj":"T1079"},{"id":"R779","pred":"themeOf","subj":"T1076","obj":"T1080"},{"id":"R780","pred":"themeOf","subj":"T1076","obj":"T1081"},{"id":"R781","pred":"themeOf","subj":"T1083","obj":"T1082"},{"id":"R796","pred":"causeOf","subj":"T1107","obj":"T1075"},{"id":"R797","pred":"causeOf","subj":"T1107","obj":"T1082"},{"id":"R798","pred":"causeOf","subj":"T1107","obj":"T1090"},{"id":"R800","pred":"causeOf","subj":"T1111","obj":"T1077"},{"id":"R801","pred":"causeOf","subj":"T1111","obj":"T1084"},{"id":"R802","pred":"causeOf","subj":"T1111","obj":"T1092"},{"id":"R803","pred":"causeOf","subj":"T1112","obj":"T1078"},{"id":"R804","pred":"causeOf","subj":"T1112","obj":"T1086"},{"id":"R805","pred":"causeOf","subj":"T1112","obj":"T1093"},{"id":"R806","pred":"causeOf","subj":"T1113","obj":"T1079"},{"id":"R807","pred":"causeOf","subj":"T1113","obj":"T1087"},{"id":"R808","pred":"causeOf","subj":"T1113","obj":"T1094"},{"id":"R809","pred":"causeOf","subj":"T1114","obj":"T1080"},{"id":"R810","pred":"causeOf","subj":"T1114","obj":"T1088"},{"id":"R811","pred":"causeOf","subj":"T1114","obj":"T1095"},{"id":"R812","pred":"causeOf","subj":"T1115","obj":"T1081"},{"id":"R813","pred":"causeOf","subj":"T1115","obj":"T1089"},{"id":"R814","pred":"causeOf","subj":"T1115","obj":"T1097"},{"id":"R818","pred":"themeOf","subj":"T1122","obj":"T1107"},{"id":"R819","pred":"themeOf","subj":"T1122","obj":"T1111"},{"id":"R820","pred":"themeOf","subj":"T1122","obj":"T1112"},{"id":"R821","pred":"themeOf","subj":"T1122","obj":"T1113"},{"id":"R822","pred":"themeOf","subj":"T1122","obj":"T1114"},{"id":"R823","pred":"themeOf","subj":"T1122","obj":"T1115"},{"id":"R824","pred":"themeOf","subj":"T1123","obj":"T1107"},{"id":"R825","pred":"themeOf","subj":"T1124","obj":"T1111"},{"id":"R826","pred":"themeOf","subj":"T1125","obj":"T1112"},{"id":"R827","pred":"themeOf","subj":"T1126","obj":"T1113"},{"id":"R828","pred":"themeOf","subj":"T1128","obj":"T1114"},{"id":"R829","pred":"themeOf","subj":"T1129","obj":"T1115"},{"id":"R830","pred":"themeOf","subj":"T1130","obj":"T1076"},{"id":"R833","pred":"themeOf","subj":"T1131","obj":"T1083"},{"id":"R836","pred":"themeOf","subj":"T1132","obj":"T1091"},{"id":"R782","pred":"themeOf","subj":"T1083","obj":"T1084"},{"id":"R783","pred":"themeOf","subj":"T1083","obj":"T1086"},{"id":"R784","pred":"themeOf","subj":"T1083","obj":"T1087"},{"id":"R785","pred":"themeOf","subj":"T1083","obj":"T1088"},{"id":"R786","pred":"themeOf","subj":"T1083","obj":"T1089"},{"id":"R787","pred":"themeOf","subj":"T1091","obj":"T1090"},{"id":"R788","pred":"themeOf","subj":"T1091","obj":"T1092"},{"id":"R789","pred":"themeOf","subj":"T1091","obj":"T1093"},{"id":"R790","pred":"themeOf","subj":"T1091","obj":"T1094"},{"id":"R791","pred":"themeOf","subj":"T1091","obj":"T1095"},{"id":"R792","pred":"themeOf","subj":"T1091","obj":"T1097"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1660","span":{"begin":0,"end":3},"obj":"P22004"},{"id":"T1661","span":{"begin":0,"end":3},"obj":"P12644"},{"id":"T1662","span":{"begin":0,"end":3},"obj":"P12643"},{"id":"T1663","span":{"begin":0,"end":3},"obj":"P18075"},{"id":"T1664","span":{"begin":0,"end":5},"obj":"P22004"},{"id":"T1665","span":{"begin":62,"end":69},"obj":"Q04771"},{"id":"T1666","span":{"begin":71,"end":74},"obj":"P18075"},{"id":"T1667","span":{"begin":71,"end":74},"obj":"P22004"},{"id":"T1668","span":{"begin":71,"end":74},"obj":"P12644"},{"id":"T1669","span":{"begin":71,"end":74},"obj":"P12643"},{"id":"T1670","span":{"begin":71,"end":78},"obj":"P36894"},{"id":"T1671","span":{"begin":84,"end":87},"obj":"P18075"},{"id":"T1672","span":{"begin":84,"end":87},"obj":"P22004"},{"id":"T1673","span":{"begin":84,"end":87},"obj":"P12643"},{"id":"T1674","span":{"begin":84,"end":87},"obj":"P12644"},{"id":"T1675","span":{"begin":84,"end":91},"obj":"O00238"},{"id":"T1676","span":{"begin":118,"end":121},"obj":"P22004"},{"id":"T1677","span":{"begin":118,"end":121},"obj":"P12643"},{"id":"T1678","span":{"begin":118,"end":121},"obj":"P12644"},{"id":"T1679","span":{"begin":118,"end":121},"obj":"P18075"},{"id":"T1680","span":{"begin":118,"end":125},"obj":"Q13873"},{"id":"T1681","span":{"begin":127,"end":135},"obj":"P27037"},{"id":"T1682","span":{"begin":140,"end":148},"obj":"Q13705"},{"id":"T1683","span":{"begin":207,"end":213},"obj":"Q15797"},{"id":"T1684","span":{"begin":215,"end":221},"obj":"Q99717"},{"id":"T1685","span":{"begin":227,"end":233},"obj":"Q9JIW5"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}
tees-test
{"project":"tees-test","denotations":[{"id":"T331","span":{"begin":0,"end":5},"obj":"D055418"},{"id":"T332","span":{"begin":0,"end":5},"obj":"D055418"},{"id":"T333","span":{"begin":0,"end":5},"obj":"Q04906"},{"id":"T334","span":{"begin":0,"end":5},"obj":"PR:000000167"},{"id":"T335","span":{"begin":0,"end":5},"obj":"P20722"},{"id":"T336","span":{"begin":0,"end":5},"obj":"PR:Q04906"},{"id":"T337","span":{"begin":0,"end":5},"obj":"P22004"},{"id":"T338","span":{"begin":0,"end":5},"obj":"PR:P22004"},{"id":"T339","span":{"begin":0,"end":5},"obj":"PR:P20722"},{"id":"T340","span":{"begin":10,"end":16},"obj":"SO:0000725"},{"id":"T341","span":{"begin":10,"end":16},"obj":"SO:0000418"},{"id":"T342","span":{"begin":71,"end":74},"obj":"CHEBI:60815"},{"id":"T343","span":{"begin":71,"end":74},"obj":"PR:000000034"},{"id":"T344","span":{"begin":71,"end":74},"obj":"P35855"},{"id":"T345","span":{"begin":84,"end":87},"obj":"CHEBI:60815"},{"id":"T346","span":{"begin":84,"end":87},"obj":"PR:000000034"},{"id":"T347","span":{"begin":84,"end":87},"obj":"P35855"},{"id":"T348","span":{"begin":88,"end":91},"obj":"CHEBI:33942"},{"id":"T349","span":{"begin":88,"end":91},"obj":"UBERON:0002228"},{"id":"T350","span":{"begin":108,"end":121},"obj":"D052004"},{"id":"T351","span":{"begin":118,"end":121},"obj":"PR:000000034"},{"id":"T352","span":{"begin":118,"end":121},"obj":"P35855"},{"id":"T353","span":{"begin":168,"end":183},"obj":"GO:0016310"},{"id":"T354","span":{"begin":207,"end":213},"obj":"PR:Q9I8V2"},{"id":"T355","span":{"begin":207,"end":213},"obj":"PR:P97588"},{"id":"T356","span":{"begin":207,"end":213},"obj":"Q15797"},{"id":"T357","span":{"begin":207,"end":213},"obj":"PR:000000363"},{"id":"T358","span":{"begin":207,"end":213},"obj":"PR:P70340"},{"id":"T359","span":{"begin":207,"end":213},"obj":"P70340"},{"id":"T360","span":{"begin":207,"end":213},"obj":"Q9I962"},{"id":"T361","span":{"begin":207,"end":213},"obj":"PR:Q15797"},{"id":"T362","span":{"begin":207,"end":213},"obj":"P97588"},{"id":"T363","span":{"begin":207,"end":213},"obj":"Q9I8V2"},{"id":"T364","span":{"begin":207,"end":213},"obj":"Q1JQA2"},{"id":"T365","span":{"begin":215,"end":221},"obj":"PR:P97454"},{"id":"T366","span":{"begin":215,"end":221},"obj":"PR:Q9R1V3"},{"id":"T367","span":{"begin":215,"end":221},"obj":"PR:Q9W7E7"},{"id":"T368","span":{"begin":215,"end":221},"obj":"Q5R6H7"},{"id":"T369","span":{"begin":215,"end":221},"obj":"Q56I99"},{"id":"T370","span":{"begin":215,"end":221},"obj":"Q9W7E7"},{"id":"T371","span":{"begin":215,"end":221},"obj":"PR:Q56I99"},{"id":"T372","span":{"begin":215,"end":221},"obj":"Q99717"},{"id":"T373","span":{"begin":215,"end":221},"obj":"P97454"},{"id":"T374","span":{"begin":215,"end":221},"obj":"Q9R1V3"},{"id":"T375","span":{"begin":215,"end":221},"obj":"PR:Q99717"},{"id":"T376","span":{"begin":215,"end":221},"obj":"PR:000000372"},{"id":"T377","span":{"begin":227,"end":233},"obj":"Q9JIW5"},{"id":"T378","span":{"begin":227,"end":233},"obj":"PR:O54835"},{"id":"T379","span":{"begin":227,"end":233},"obj":"PR:000000375"},{"id":"T380","span":{"begin":227,"end":233},"obj":"PR:Q9JIW5"},{"id":"T381","span":{"begin":227,"end":233},"obj":"O54835"},{"id":"T382","span":{"begin":227,"end":233},"obj":"PR:O15198"}],"text":"BMP-6 can signal through the ligation of the type I receptors Act-RIA, BMP-RIA, and BMP-RIB and the type II receptors BMP-RII, Act-RIIA and Act-RIIB, which lead to the phosphorylation of the receptor Smads (Smad-1, Smad-5, and Smad-8)."}