PMC:1134658 / 14821-14953
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8530 | 0-2 | IN | denotes | In |
| T8531 | 3-4 | DT | denotes | a |
| T8532 | 5-13 | JJ | denotes | parallel |
| T8533 | 14-19 | NN | denotes | study |
| T8534 | 19-20 | -COMMA- | denotes | , |
| T8535 | 21-23 | PRP | denotes | we |
| T8536 | 24-28 | VB | denotes | have |
| T8537 | 29-34 | VB | denotes | found |
| T8538 | 35-39 | IN | denotes | that |
| T8539 | 40-45 | JJ | denotes | other |
| T8540 | 46-50 | NN | denotes | BMPs |
| T8541 | 51-55 | RB | denotes | also |
| T8542 | 56-63 | VB | denotes | induced |
| T8543 | 64-79 | NN | denotes | phosphorylation |
| T8544 | 80-82 | IN | denotes | of |
| T8545 | 83-92 | NN | denotes | Smad1/5/8 |
| T8546 | 93-95 | IN | denotes | in |
| T8547 | 96-106 | JJ | denotes | peripheral |
| T8548 | 107-108 | NN | denotes | B |
| T8549 | 109-114 | NN | denotes | cells |
| T8550 | 115-116 | -LRB- | denotes | ( |
| T8551 | 116-120 | NN | denotes | data |
| T8552 | 121-124 | RB | denotes | not |
| T8553 | 125-130 | VB | denotes | shown |
| T8554 | 130-131 | -RRB- | denotes | ) |
| R6558 | T8533 | T8530 | arg2Of | study,In |
| R6559 | T8533 | T8531 | arg1Of | study,a |
| R6560 | T8533 | T8532 | arg1Of | study,parallel |
| R6561 | T8535 | T8536 | arg1Of | we,have |
| R6562 | T8535 | T8537 | arg1Of | we,found |
| R6563 | T8537 | T8530 | arg1Of | found,In |
| R6564 | T8537 | T8534 | arg1Of | found,"," |
| R6565 | T8537 | T8536 | arg2Of | found,have |
| R6566 | T8540 | T8539 | arg1Of | BMPs,other |
| R6567 | T8540 | T8542 | arg1Of | BMPs,induced |
| R6568 | T8542 | T8537 | arg2Of | induced,found |
| R6569 | T8542 | T8538 | arg1Of | induced,that |
| R6570 | T8542 | T8541 | arg1Of | induced,also |
| R6571 | T8542 | T8546 | arg1Of | induced,in |
| R6572 | T8543 | T8542 | arg2Of | phosphorylation,induced |
| R6573 | T8543 | T8544 | arg1Of | phosphorylation,of |
| R6574 | T8545 | T8544 | arg2Of | Smad1/5/8,of |
| R6575 | T8549 | T8546 | arg2Of | cells,in |
| R6576 | T8549 | T8547 | arg1Of | cells,peripheral |
| R6577 | T8549 | T8548 | arg1Of | cells,B |
| R6578 | T8549 | T8550 | arg1Of | cells,( |
| R6579 | T8551 | T8550 | arg2Of | data,( |
| R6580 | T8551 | T8553 | arg2Of | data,shown |
| R6581 | T8553 | T8552 | arg1Of | shown,not |
| R6582 | T8554 | T8550 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10919 | 0-2 | IN | denotes | In |
| T10920 | 3-4 | DT | denotes | a |
| T10921 | 5-13 | JJ | denotes | parallel |
| T10922 | 14-19 | NN | denotes | study |
| T10923 | 19-20 | , | denotes | , |
| T10924 | 21-23 | PRP | denotes | we |
| T10925 | 24-28 | VBP | denotes | have |
| T10926 | 29-34 | VBN | denotes | found |
| T10927 | 35-39 | IN | denotes | that |
| T10928 | 40-45 | JJ | denotes | other |
| T10929 | 46-50 | NNS | denotes | BMPs |
| T10930 | 51-55 | RB | denotes | also |
| T10931 | 56-63 | VBD | denotes | induced |
| T10932 | 64-79 | NN | denotes | phosphorylation |
| T10933 | 80-82 | IN | denotes | of |
| T10934 | 83-92 | NNP | denotes | Smad1/5/8 |
| T10935 | 93-95 | IN | denotes | in |
| T10936 | 96-106 | JJ | denotes | peripheral |
| T10937 | 107-108 | NNP | denotes | B |
| T10938 | 109-114 | NNS | denotes | cells |
| T10939 | 115-116 | -LRB- | denotes | ( |
| T10940 | 116-120 | NNS | denotes | data |
| T10941 | 121-124 | RB | denotes | not |
| T10942 | 125-130 | VBN | denotes | shown |
| T10943 | 130-131 | -RRB- | denotes | ) |
| T10944 | 131-132 | . | denotes | . |
| R8441 | T10919 | T10926 | prep | In,found |
| R8442 | T10920 | T10922 | det | a,study |
| R8443 | T10921 | T10922 | amod | parallel,study |
| R8445 | T10922 | T10919 | pobj | study,In |
| R8446 | T10923 | T10926 | punct | ",",found |
| R8448 | T10924 | T10926 | nsubj | we,found |
| R8449 | T10925 | T10926 | aux | have,found |
| R8451 | T10926 | T10926 | ROOT | found,found |
| R8452 | T10927 | T10931 | mark | that,induced |
| R8454 | T10928 | T10929 | amod | other,BMPs |
| R8455 | T10929 | T10931 | nsubj | BMPs,induced |
| R8457 | T10930 | T10931 | advmod | also,induced |
| R8461 | T10931 | T10926 | ccomp | induced,found |
| R8462 | T10932 | T10931 | dobj | phosphorylation,induced |
| R8463 | T10933 | T10932 | prep | of,phosphorylation |
| R8464 | T10934 | T10933 | pobj | Smad1/5/8,of |
| R8466 | T10935 | T10932 | prep | in,phosphorylation |
| R8467 | T10936 | T10938 | amod | peripheral,cells |
| R8469 | T10937 | T10938 | compound | B,cells |
| R8470 | T10938 | T10935 | pobj | cells,in |
| R8471 | T10939 | T10942 | punct | (,shown |
| R8473 | T10940 | T10942 | nsubjpass | data,shown |
| R8474 | T10941 | T10942 | neg | not,shown |
| R8475 | T10942 | T10931 | parataxis | shown,induced |
| R8477 | T10943 | T10942 | punct | ),shown |
| R8478 | T10944 | T10926 | punct | .,found |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7893 | 64-79 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12268 | 109-114 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7832 | 0-132 | Sentence | denotes | In a parallel study, we have found that other BMPs also induced phosphorylation of Smad1/5/8 in peripheral B cells (data not shown). |
| T121 | 0-132 | Sentence | denotes | In a parallel study, we have found that other BMPs also induced phosphorylation of Smad1/5/8 in peripheral B cells (data not shown). |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13043 | 56-63 | Positive_regulation | denotes | induced |
| T13044 | 56-63 | Positive_regulation | denotes | induced |
| T13045 | 56-63 | Positive_regulation | denotes | induced |
| T13046 | 64-79 | Phosphorylation | denotes | phosphorylation |
| T13047 | 64-79 | Phosphorylation | denotes | phosphorylation |
| T13048 | 64-79 | Phosphorylation | denotes | phosphorylation |
| T13049 | 83-88 | Protein | denotes | Smad1 |
| T13050 | 89-90 | Protein | denotes | 5 |
| T13051 | 91-92 | Protein | denotes | 8 |
| R10265 | T13046 | T13044 | themeOf | phosphorylation,induced |
| R10266 | T13047 | T13045 | themeOf | phosphorylation,induced |
| R10268 | T13048 | T13043 | themeOf | phosphorylation,induced |
| R10269 | T13049 | T13046 | themeOf | Smad1,phosphorylation |
| R10270 | T13050 | T13047 | themeOf | 5,phosphorylation |
| R10272 | T13051 | T13048 | themeOf | 8,phosphorylation |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12367 | 56-63 | Positive_regulation | denotes | induced |
| T12368 | 64-79 | Phosphorylation | denotes | phosphorylation |
| T12369 | 83-92 | Protein | denotes | Smad1/5/8 |
| R9843 | T12368 | T12367 | themeOf | phosphorylation,induced |
| R9844 | T12369 | T12368 | themeOf | Smad1/5/8,phosphorylation |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7647 | 56-63 | Positive_regulation | denotes | induced |
| T7648 | 56-63 | Positive_regulation | denotes | induced |
| T7649 | 56-63 | Positive_regulation | denotes | induced |
| T7650 | 64-79 | Phosphorylation | denotes | phosphorylation |
| T7651 | 64-79 | Phosphorylation | denotes | phosphorylation |
| T7652 | 64-79 | Phosphorylation | denotes | phosphorylation |
| T7653 | 83-88 | Protein | denotes | Smad1 |
| T7654 | 89-90 | Protein | denotes | 5 |
| T7655 | 91-92 | Protein | denotes | 8 |
| R5871 | T7650 | T7648 | themeOf | phosphorylation,induced |
| R5872 | T7651 | T7649 | themeOf | phosphorylation,induced |
| R5873 | T7652 | T7647 | themeOf | phosphorylation,induced |
| R5874 | T7653 | T7650 | themeOf | Smad1,phosphorylation |
| R5875 | T7654 | T7651 | themeOf | 5,phosphorylation |
| R5876 | T7655 | T7652 | themeOf | 8,phosphorylation |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10007 | 46-50 | P22004 | denotes | BMPs |
| T10008 | 46-50 | P12644 | denotes | BMPs |
| T10009 | 46-50 | P12643 | denotes | BMPs |
| T10010 | 46-50 | P18075 | denotes | BMPs |
| T10011 | 83-88 | Q15797 | denotes | Smad1 |
test2
| Id | Subject | Object | Predicate | Lexical cue | Negation |
|---|---|---|---|---|---|
| T7426 | 56-63 | Positive_regulation | denotes | induced | |
| T7427 | 64-79 | Phosphorylation | denotes | phosphorylation | |
| T7428 | 83-88 | Protein | denotes | Smad1 | |
| T7429 | 89-90 | Protein | denotes | 5 | |
| T7430 | 91-92 | Protein | denotes | 8 | true |
| R5764 | T7427 | T7426 | themeOf | phosphorylation,induced | |
| R5765 | T7428 | T7427 | themeOf | Smad1,phosphorylation | |
| R5766 | T7429 | T7427 | themeOf | 5,phosphorylation | |
| R5767 | T7430 | T7427 | themeOf | 8,phosphorylation |
tees-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1775 | 64-79 | GO:0016310 | denotes | phosphorylation |
| T1776 | 83-88 | PR:Q9I8V2 | denotes | Smad1 |
| T1777 | 83-88 | PR:P97588 | denotes | Smad1 |
| T1778 | 83-88 | Q15797 | denotes | Smad1 |
| T1779 | 83-88 | PR:000000363 | denotes | Smad1 |
| T1780 | 83-88 | PR:P70340 | denotes | Smad1 |
| T1781 | 83-88 | P70340 | denotes | Smad1 |
| T1782 | 83-88 | Q9I962 | denotes | Smad1 |
| T1783 | 83-88 | PR:Q15797 | denotes | Smad1 |
| T1784 | 83-88 | P97588 | denotes | Smad1 |
| T1785 | 83-88 | Q9I8V2 | denotes | Smad1 |
| T1786 | 83-88 | Q1JQA2 | denotes | Smad1 |
| T1787 | 121-130 | 32644 | denotes | not shown |