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PMC:1134658 / 1323-1576 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T406 5-12 VB denotes induced
T407 13-28 NN denotes phosphorylation
T408 29-31 IN denotes of
T409 32-41 NN denotes Smad1/5/8
T410 42-50 VB denotes followed
T411 51-53 IN denotes by
T412 54-56 DT denotes an
T413 57-69 NN denotes upregulation
T414 70-72 IN denotes of
T415 73-76 NN denotes Id1
T1148 91-98 NN denotes Members
T1149 99-101 IN denotes of
T1150 102-105 DT denotes the
T1151 106-118 VB denotes transforming
T1152 119-125 NN denotes growth
T1153 126-132 NN denotes factor
T1154 133-134 NN denotes β
T1155 135-136 -LRB- denotes (
T1156 136-141 NN denotes TGF-β
T1157 141-142 -RRB- denotes )
T1158 143-154 NN denotes superfamily
T1159 155-159 VB denotes play
T1160 160-167 JJ denotes central
T1161 168-173 NN denotes roles
T1162 174-176 IN denotes in
T1163 177-188 VB denotes controlling
T1164 189-197 JJ denotes cellular
T1165 198-211 NN denotes proliferation
T1166 211-212 -COMMA- denotes ,
T1167 213-228 NN denotes differentiation
T1168 228-229 -COMMA- denotes ,
T1169 230-239 NN denotes migration
T1170 240-243 CC denotes and
T1171 244-253 NN denotes apoptosis
R286 T407 T406 arg2Of phosphorylation,induced
R287 T407 T408 arg1Of phosphorylation,of
R288 T409 T408 arg2Of Smad1/5/8,of
R289 T409 T410 arg2Of Smad1/5/8,followed
R290 T413 T410 arg1Of upregulation,followed
R291 T413 T411 arg2Of upregulation,by
R292 T413 T412 arg1Of upregulation,an
R293 T413 T414 arg1Of upregulation,of
R294 T415 T414 arg2Of Id1,of
R859 T1158 T1151 arg1Of superfamily,transforming
R860 T1158 T1154 arg1Of superfamily,β
R861 T1159 T1162 arg1Of play,in
R862 T1161 T1159 arg2Of roles,play
R863 T1161 T1160 arg1Of roles,central
R864 T1163 T1162 arg2Of controlling,in
R865 T1165 T1164 arg1Of proliferation,cellular
R866 T1165 T1166 arg1Of proliferation,","
R867 T1166 T1168 arg1Of ",",","
R868 T1167 T1166 arg2Of differentiation,","
R869 T1168 T1170 arg1Of ",",and
R870 T1169 T1168 arg2Of migration,","
R871 T1170 T1163 arg2Of and,controlling
R872 T1171 T1170 arg2Of apoptosis,and
R849 T1148 T1149 arg1Of Members,of
R850 T1148 T1159 arg1Of Members,play
R851 T1148 T1163 arg1Of Members,controlling
R852 T1154 T1152 arg1Of β,growth
R853 T1154 T1153 arg1Of β,factor
R854 T1154 T1155 arg1Of β,(
R855 T1156 T1155 arg2Of TGF-β,(
R856 T1157 T1155 arg3Of ),(
R857 T1158 T1149 arg2Of superfamily,of
R858 T1158 T1150 arg1Of superfamily,the

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T732 5-12 VBD denotes induced
T733 13-28 NN denotes phosphorylation
T734 29-31 IN denotes of
T735 32-41 JJ denotes Smad1/5/8
T736 42-50 VBN denotes followed
T737 51-53 IN denotes by
T738 54-56 DT denotes an
T739 57-69 NN denotes upregulation
T740 70-72 IN denotes of
T741 73-76 NNP denotes Id1
T742 76-77 . denotes .
T1730 91-98 NNS denotes Members
T1731 99-101 IN denotes of
T1732 102-105 DT denotes the
T1733 106-118 VBG denotes transforming
T1734 119-125 NN denotes growth
T1735 126-132 NN denotes factor
T1736 133-134 NN denotes β
T1737 135-136 -LRB- denotes (
T1738 136-141 NNP denotes TGF-β
T1739 141-142 -RRB- denotes )
T1740 143-154 RB denotes superfamily
T1741 155-159 VB denotes play
T1742 160-167 JJ denotes central
T1743 168-173 NNS denotes roles
T1744 174-176 IN denotes in
T1745 177-188 VBG denotes controlling
T1746 189-197 JJ denotes cellular
T1747 198-211 NN denotes proliferation
T1748 211-212 , denotes ,
T1749 213-228 NN denotes differentiation
T1750 228-229 , denotes ,
T1751 230-239 NN denotes migration
T1752 240-243 CC denotes and
T1753 244-253 NN denotes apoptosis
R1326 T1736 T1730 conj β,Members
R1327 T1737 T1738 punct (,TGF-β
R1328 T1738 T1736 appos TGF-β,β
R1329 T1739 T1736 punct ),β
R1330 T1740 T1741 advmod superfamily,play
R1331 T1741 T1741 ROOT play,play
R1332 T1742 T1743 amod central,roles
R1333 T1743 T1741 dobj roles,play
R1334 T1744 T1741 prep in,play
R1335 T1745 T1744 pcomp controlling,in
R1336 T1746 T1747 amod cellular,proliferation
R1337 T1747 T1745 dobj proliferation,controlling
R526 T733 T732 dobj phosphorylation,induced
R527 T734 T733 prep of,phosphorylation
R528 T735 T736 amod Smad1/5/8,followed
R529 T736 T734 pcomp followed,of
R530 T737 T736 agent by,followed
R531 T738 T739 det an,upregulation
R532 T739 T737 pobj upregulation,by
R533 T740 T739 prep of,upregulation
R534 T741 T740 pobj Id1,of
R1320 T1730 T1741 nsubj Members,play
R1321 T1731 T1730 prep of,Members
R1322 T1732 T1735 det the,factor
R1323 T1733 T1735 amod transforming,factor
R1324 T1734 T1735 compound growth,factor
R1325 T1735 T1731 pobj factor,of
R1338 T1748 T1747 punct ",",proliferation
R1339 T1749 T1747 conj differentiation,proliferation
R1340 T1750 T1749 punct ",",differentiation
R1341 T1751 T1749 conj migration,differentiation
R1342 T1752 T1751 cc and,migration

UBERON-AE

Id Subject Object Predicate Lexical cue
T1030 160-167 http://purl.obolibrary.org/obo/UBERON_0012131 denotes central

GO-BP

Id Subject Object Predicate Lexical cue
T179 13-28 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T1051 119-125 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T1052 189-197 http://purl.obolibrary.org/obo/GO_0007349 denotes cellular
T1053 244-253 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T1055 244-253 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis

GO-MF

Id Subject Object Predicate Lexical cue
T2205 119-134 http://purl.obolibrary.org/obo/GO_0005160 denotes growth factor β

sentences

Id Subject Object Predicate Lexical cue
T16 80-90 Sentence denotes Background

events-check-again

Id Subject Object Predicate Lexical cue
T896 5-12 Positive_regulation denotes induced
T897 5-12 Positive_regulation denotes induced
T898 5-12 Positive_regulation denotes induced
T899 13-28 Phosphorylation denotes phosphorylation
T900 13-28 Phosphorylation denotes phosphorylation
T901 13-28 Phosphorylation denotes phosphorylation
T902 32-37 Protein denotes Smad1
T903 38-39 Protein denotes 5
T904 40-41 Protein denotes 8
T905 42-50 Positive_regulation denotes followed
T906 42-50 Positive_regulation denotes followed
T907 42-50 Positive_regulation denotes followed
T908 57-69 Positive_regulation denotes upregulation
T909 73-76 Protein denotes Id1
T2424 106-134 Protein denotes transforming growth factor β
T2425 136-141 Protein denotes TGF-β
R604 T899 T898 themeOf phosphorylation,induced
R605 T899 T905 causeOf phosphorylation,followed
R606 T900 T896 themeOf phosphorylation,induced
R607 T900 T907 causeOf phosphorylation,followed
R608 T901 T897 themeOf phosphorylation,induced
R609 T901 T906 causeOf phosphorylation,followed
R610 T902 T901 themeOf Smad1,phosphorylation
R611 T903 T899 themeOf 5,phosphorylation
R612 T904 T900 themeOf 8,phosphorylation
R613 T908 T906 themeOf upregulation,followed
R614 T908 T905 themeOf upregulation,followed
R615 T908 T907 themeOf upregulation,followed
R616 T909 T908 themeOf Id1,upregulation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T793 5-12 Positive_regulation denotes induced
T794 13-28 Phosphorylation denotes phosphorylation
T795 32-41 Protein denotes Smad1/5/8
T796 57-69 Positive_regulation denotes upregulation
T797 73-76 Protein denotes Id1
R557 T794 T793 themeOf phosphorylation,induced
R558 T795 T794 themeOf Smad1/5/8,phosphorylation
R559 T797 T796 themeOf Id1,upregulation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T146 5-12 Positive_regulation denotes induced
T147 5-12 Positive_regulation denotes induced
T148 5-12 Positive_regulation denotes induced
T1116 106-134 Protein denotes transforming growth factor β
T1127 136-141 Protein denotes TGF-β
T149 13-28 Phosphorylation denotes phosphorylation
T150 13-28 Phosphorylation denotes phosphorylation
T151 13-28 Phosphorylation denotes phosphorylation
T152 32-37 Protein denotes Smad1
T153 38-39 Protein denotes 5
T154 40-41 Protein denotes 8
T155 42-50 Positive_regulation denotes followed
T156 42-50 Positive_regulation denotes followed
T157 42-50 Positive_regulation denotes followed
T158 57-69 Positive_regulation denotes upregulation
T159 73-76 Protein denotes Id1
R665 T149 T148 themeOf phosphorylation,induced
R666 T149 T155 causeOf phosphorylation,followed
R667 T150 T146 themeOf phosphorylation,induced
R668 T150 T157 causeOf phosphorylation,followed
R669 T151 T147 themeOf phosphorylation,induced
R670 T151 T156 causeOf phosphorylation,followed
R671 T152 T151 themeOf Smad1,phosphorylation
R672 T153 T149 themeOf 5,phosphorylation
R673 T154 T150 themeOf 8,phosphorylation
R674 T158 T156 themeOf upregulation,followed
R675 T158 T155 themeOf upregulation,followed
R676 T158 T157 themeOf upregulation,followed
R677 T159 T158 themeOf Id1,upregulation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T486 32-37 Q15797 denotes Smad1
T487 73-76 P41134 denotes Id1
T1608 106-134 P01137 denotes transforming growth factor β
T1609 136-141 P01137 denotes TGF-β

test2

Id Subject Object Predicate Lexical cue
T94 5-12 Positive_regulation denotes induced
T95 13-28 Phosphorylation denotes phosphorylation
T96 32-37 Protein denotes Smad1
T97 38-39 Protein denotes 5
T98 40-41 Protein denotes 8
T99 42-50 Positive_regulation denotes followed
T100 57-69 Positive_regulation denotes upregulation
T101 73-76 Protein denotes Id1
R59 T95 T99 causeOf phosphorylation,followed
R60 T95 T94 themeOf phosphorylation,induced
R61 T96 T95 themeOf Smad1,phosphorylation
R62 T97 T95 themeOf 5,phosphorylation
R63 T98 T95 themeOf 8,phosphorylation
R64 T100 T99 themeOf upregulation,followed
R65 T101 T100 themeOf Id1,upregulation

tees-test

Id Subject Object Predicate Lexical cue
T191 13-28 GO:0016310 denotes phosphorylation
T192 32-37 PR:Q9I8V2 denotes Smad1
T193 32-37 PR:P97588 denotes Smad1
T194 32-37 Q15797 denotes Smad1
T195 32-37 PR:000000363 denotes Smad1
T196 32-37 PR:P70340 denotes Smad1
T197 32-37 P70340 denotes Smad1
T198 32-37 Q9I962 denotes Smad1
T199 32-37 PR:Q15797 denotes Smad1
T200 32-37 P97588 denotes Smad1
T201 32-37 Q9I8V2 denotes Smad1
T202 32-37 Q1JQA2 denotes Smad1
T203 73-76 PR:P41134 denotes Id1
T204 73-76 PR:P20067 denotes Id1
T205 73-76 PR:P41135 denotes Id1
T206 73-76 PR:000000039 denotes Id1
T207 106-134 D016212 denotes transforming growth factor β
T208 106-134 D016212 denotes transforming growth factor β
T209 106-134 PR:000000046 denotes transforming growth factor β
T210 106-134 GO:0005160 denotes transforming growth factor β
T211 136-141 D016212 denotes TGF-β
T212 136-141 D016212 denotes TGF-β
T213 136-154 PR:000000008 denotes TGF-β) superfamily
T214 198-211 UBERON:2000098 denotes proliferation
T215 244-253 GO:0097194 denotes apoptosis
T216 244-253 GO:0006915 denotes apoptosis