PMC:1134658 / 11104-11267
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6648 | 0-13 | RB | denotes | Interestingly |
T6649 | 13-14 | -COMMA- | denotes | , |
T6650 | 15-17 | IN | denotes | in |
T6651 | 18-19 | DT | denotes | a |
T6652 | 20-28 | JJ | denotes | separate |
T6653 | 29-34 | NN | denotes | study |
T6654 | 35-37 | PRP | denotes | we |
T6655 | 38-42 | VB | denotes | have |
T6656 | 43-48 | VB | denotes | found |
T6657 | 49-53 | IN | denotes | that |
T6658 | 54-60 | JJ | denotes | normal |
T6659 | 61-66 | JJ | denotes | human |
T6660 | 67-68 | NN | denotes | T |
T6661 | 69-74 | NN | denotes | cells |
T6662 | 75-77 | VB | denotes | do |
T6663 | 78-81 | RB | denotes | not |
T6664 | 82-89 | VB | denotes | express |
T6665 | 90-95 | NN | denotes | BMP-6 |
T6666 | 96-100 | NN | denotes | mRNA |
T6667 | 101-106 | IN | denotes | after |
T6668 | 107-117 | NN | denotes | activation |
T6669 | 118-119 | -LRB- | denotes | ( |
T6670 | 119-128 | NNP | denotes | Sivertsen |
T6671 | 129-131 | FW | denotes | et |
T6672 | 132-134 | FW | denotes | al |
T6673 | 134-135 | -COMMA- | denotes | , |
T6674 | 136-146 | NN | denotes | manuscript |
T6675 | 147-149 | IN | denotes | in |
T6676 | 150-161 | NN | denotes | preparation |
T6677 | 161-162 | -RRB- | denotes | ) |
R5242 | T6653 | T6650 | arg2Of | study,in |
R5243 | T6653 | T6651 | arg1Of | study,a |
R5244 | T6653 | T6652 | arg1Of | study,separate |
R5245 | T6654 | T6655 | arg1Of | we,have |
R5246 | T6654 | T6656 | arg1Of | we,found |
R5247 | T6656 | T6648 | arg1Of | found,Interestingly |
R5248 | T6656 | T6649 | arg1Of | found,"," |
R5249 | T6656 | T6650 | arg1Of | found,in |
R5250 | T6656 | T6655 | arg2Of | found,have |
R5251 | T6661 | T6658 | arg1Of | cells,normal |
R5252 | T6661 | T6659 | arg1Of | cells,human |
R5253 | T6661 | T6660 | arg1Of | cells,T |
R5254 | T6661 | T6662 | arg1Of | cells,do |
R5255 | T6661 | T6664 | arg1Of | cells,express |
R5256 | T6664 | T6656 | arg2Of | express,found |
R5257 | T6664 | T6657 | arg1Of | express,that |
R5258 | T6664 | T6662 | arg2Of | express,do |
R5259 | T6664 | T6663 | arg1Of | express,not |
R5260 | T6664 | T6667 | arg1Of | express,after |
R5261 | T6666 | T6664 | arg2Of | mRNA,express |
R5262 | T6666 | T6665 | arg1Of | mRNA,BMP-6 |
R5263 | T6668 | T6667 | arg2Of | activation,after |
R5264 | T6668 | T6669 | arg1Of | activation,( |
R5265 | T6672 | T6670 | arg1Of | al,Sivertsen |
R5266 | T6672 | T6671 | arg1Of | al,et |
R5267 | T6672 | T6673 | arg1Of | al,"," |
R5268 | T6673 | T6669 | arg2Of | ",",( |
R5269 | T6673 | T6675 | arg1Of | ",",in |
R5270 | T6674 | T6673 | arg2Of | manuscript,"," |
R5271 | T6676 | T6675 | arg2Of | preparation,in |
R5272 | T6677 | T6669 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6948 | 0-13 | RB | denotes | Interestingly |
T6949 | 13-14 | , | denotes | , |
T6950 | 15-17 | IN | denotes | in |
T6951 | 18-19 | DT | denotes | a |
T6952 | 20-28 | JJ | denotes | separate |
T6953 | 29-34 | NN | denotes | study |
T6954 | 35-37 | PRP | denotes | we |
T6955 | 38-42 | VBP | denotes | have |
T6956 | 43-48 | VBN | denotes | found |
T6957 | 49-53 | IN | denotes | that |
T6958 | 54-60 | JJ | denotes | normal |
T6959 | 61-66 | JJ | denotes | human |
T6960 | 67-68 | NNP | denotes | T |
T6961 | 69-74 | NNS | denotes | cells |
T6962 | 75-77 | VBP | denotes | do |
T6963 | 78-81 | RB | denotes | not |
T6964 | 82-89 | VB | denotes | express |
T6965 | 90-95 | NNP | denotes | BMP-6 |
T6966 | 96-100 | NNP | denotes | mRNA |
T6967 | 101-106 | IN | denotes | after |
T6968 | 107-117 | NN | denotes | activation |
T6969 | 118-119 | -LRB- | denotes | ( |
T6970 | 119-128 | NNP | denotes | Sivertsen |
T6971 | 129-131 | FW | denotes | et |
T6972 | 132-134 | FW | denotes | al |
T6973 | 134-135 | , | denotes | , |
T6974 | 136-146 | NN | denotes | manuscript |
T6975 | 147-149 | IN | denotes | in |
T6976 | 150-161 | NN | denotes | preparation |
T6977 | 161-162 | -RRB- | denotes | ) |
T6978 | 162-163 | . | denotes | . |
R5472 | T6948 | T6956 | advmod | Interestingly,found |
R5473 | T6949 | T6956 | punct | ",",found |
R5474 | T6950 | T6956 | prep | in,found |
R5475 | T6951 | T6953 | det | a,study |
R5476 | T6952 | T6953 | amod | separate,study |
R5477 | T6953 | T6950 | pobj | study,in |
R5478 | T6954 | T6956 | nsubj | we,found |
R5479 | T6955 | T6956 | aux | have,found |
R5480 | T6956 | T6956 | ROOT | found,found |
R5481 | T6957 | T6964 | mark | that,express |
R5482 | T6958 | T6961 | amod | normal,cells |
R5483 | T6959 | T6960 | compound | human,T |
R5484 | T6960 | T6961 | compound | T,cells |
R5485 | T6961 | T6964 | nsubj | cells,express |
R5486 | T6962 | T6964 | aux | do,express |
R5487 | T6963 | T6964 | neg | not,express |
R5488 | T6964 | T6956 | ccomp | express,found |
R5489 | T6965 | T6966 | compound | BMP-6,mRNA |
R5490 | T6966 | T6964 | dobj | mRNA,express |
R5491 | T6967 | T6964 | prep | after,express |
R5492 | T6968 | T6967 | pobj | activation,after |
R5493 | T6969 | T6968 | punct | (,activation |
R5494 | T6970 | T6972 | nmod | Sivertsen,al |
R5495 | T6971 | T6972 | nmod | et,al |
R5496 | T6972 | T6968 | appos | al,activation |
R5497 | T6973 | T6968 | punct | ",",activation |
R5498 | T6974 | T6964 | conj | manuscript,express |
R5499 | T6975 | T6974 | prep | in,manuscript |
R5500 | T6976 | T6975 | pobj | preparation,in |
R5501 | T6977 | T6956 | punct | ),found |
R5502 | T6978 | T6956 | punct | .,found |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7025 | 69-74 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6488 | 0-163 | Sentence | denotes | Interestingly, in a separate study we have found that normal human T cells do not express BMP-6 mRNA after activation (Sivertsen et al, manuscript in preparation). |
T91 | 0-163 | Sentence | denotes | Interestingly, in a separate study we have found that normal human T cells do not express BMP-6 mRNA after activation (Sivertsen et al, manuscript in preparation). |
events-check-again
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T7103 | 82-89 | Transcription | denotes | express | true |
T7104 | 90-95 | Protein | denotes | BMP-6 | |
R5573 | T7104 | T7103 | themeOf | BMP-6,express |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T6475 | 82-89 | Transcription | denotes | express | true |
T6476 | 90-95 | Protein | denotes | BMP-6 | |
R5079 | T6476 | T6475 | themeOf | BMP-6,express |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6757 | 90-93 | P18075 | denotes | BMP |
T6758 | 90-93 | P12644 | denotes | BMP |
T6759 | 90-93 | P12643 | denotes | BMP |
T6760 | 90-93 | P22004 | denotes | BMP |
T6761 | 90-95 | P22004 | denotes | BMP-6 |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6453 | 82-89 | Gene_expression | denotes | express |
T6454 | 90-95 | Protein | denotes | BMP-6 |
R5070 | T6454 | T6453 | themeOf | BMP-6,express |
tees-test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1303 | 61-66 | D006801 | denotes | human |
T1304 | 90-95 | D055418 | denotes | BMP-6 |
T1305 | 90-95 | D055418 | denotes | BMP-6 |
T1306 | 90-95 | Q04906 | denotes | BMP-6 |
T1307 | 90-95 | PR:000000167 | denotes | BMP-6 |
T1308 | 90-95 | P20722 | denotes | BMP-6 |
T1309 | 90-95 | PR:Q04906 | denotes | BMP-6 |
T1310 | 90-95 | P22004 | denotes | BMP-6 |
T1311 | 90-95 | PR:P22004 | denotes | BMP-6 |
T1312 | 90-95 | PR:P20722 | denotes | BMP-6 |
T1313 | 96-100 | D012333 | denotes | mRNA |
T1314 | 96-100 | CHEBI:33699 | denotes | mRNA |
T1315 | 96-100 | SO:0000234 | denotes | mRNA |