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PMC:1087847 / 35103-35336 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T9867 0-233 sentence denotes After five washes in PBG for 5 min each, the slides were incubated for 1 h with the secondary antibody at room temperature, washed three times in PBG and three times in PBS, 5 min each, rinsed in water and embedded in gelvatol [36].
T9868 1-6 IN denotes After
T9869 58-67 VBN denotes incubated
T9870 7-11 CD denotes five
T9871 12-18 NNS denotes washes
T9872 19-21 IN denotes in
T9873 22-25 NN denotes PBG
T9874 26-29 IN denotes for
T9875 30-31 CD denotes 5
T9876 32-35 NN denotes min
T9877 36-40 DT denotes each
T9878 40-42 , denotes ,
T9879 42-45 DT denotes the
T9880 46-52 NNS denotes slides
T9881 53-57 VBD denotes were
T9882 68-71 IN denotes for
T9883 72-73 CD denotes 1
T9884 74-75 NN denotes h
T9885 76-80 IN denotes with
T9886 81-84 DT denotes the
T9887 95-103 NN denotes antibody
T9888 85-94 JJ denotes secondary
T9889 104-106 IN denotes at
T9890 107-111 NN denotes room
T9891 112-123 NN denotes temperature
T9892 123-125 , denotes ,
T9893 125-131 VBD denotes washed
T9894 132-137 CD denotes three
T9895 138-143 NNS denotes times
T9896 144-146 IN denotes in
T9897 147-150 NN denotes PBG
T9898 151-154 CC denotes and
T9899 155-160 CD denotes three
T9900 161-166 NNS denotes times
T9901 167-169 IN denotes in
T9902 170-173 NN denotes PBS
T9903 173-175 , denotes ,
T9904 175-176 CD denotes 5
T9905 177-180 NNS denotes min
T9906 181-185 DT denotes each
T9907 185-187 , denotes ,
T9908 187-193 VBN denotes rinsed
T9909 194-196 IN denotes in
T9910 197-202 NN denotes water
T9911 203-206 CC denotes and
T9912 207-215 VBN denotes embedded
T9913 216-218 IN denotes in
T9914 219-227 NN denotes gelvatol
T9915 228-229 -LRB- denotes [
T9916 229-231 CD denotes 36
T9917 231-232 -RRB- denotes ]
T9918 232-233 . denotes .
R4800 T9868 T9869 prep After,incubated
R4801 T9870 T9871 nummod five,washes
R4802 T9871 T9868 pobj washes,After
R4803 T9872 T9871 prep in,washes
R4804 T9873 T9872 pobj PBG,in
R4805 T9874 T9871 prep for,washes
R4806 T9875 T9876 nummod 5,min
R4807 T9876 T9874 pobj min,for
R4808 T9877 T9876 appos each,min
R4809 T9878 T9869 punct ", ",incubated
R4810 T9879 T9880 det the,slides
R4811 T9880 T9869 nsubjpass slides,incubated
R4812 T9881 T9869 auxpass were,incubated
R4813 T9882 T9869 prep for,incubated
R4814 T9883 T9884 nummod 1,h
R4815 T9884 T9882 pobj h,for
R4816 T9885 T9869 prep with,incubated
R4817 T9886 T9887 det the,antibody
R4818 T9887 T9885 pobj antibody,with
R4819 T9888 T9887 amod secondary,antibody
R4820 T9889 T9869 prep at,incubated
R4821 T9890 T9891 compound room,temperature
R4822 T9891 T9889 pobj temperature,at
R4823 T9892 T9869 punct ", ",incubated
R4824 T9893 T9869 conj washed,incubated
R4825 T9894 T9895 nummod three,times
R4826 T9895 T9893 npadvmod times,washed
R4827 T9896 T9893 prep in,washed
R4828 T9897 T9896 pobj PBG,in
R4829 T9898 T9893 cc and,washed
R4830 T9899 T9900 nummod three,times
R4831 T9900 T9893 conj times,washed
R4832 T9901 T9900 prep in,times
R4833 T9902 T9901 pobj PBS,in
R4834 T9903 T9893 punct ", ",washed
R4835 T9904 T9905 nummod 5,min
R4836 T9905 T9893 npadvmod min,washed
R4837 T9906 T9905 appos each,min
R4838 T9907 T9893 punct ", ",washed
R4839 T9908 T9893 conj rinsed,washed
R4840 T9909 T9908 prep in,rinsed
R4841 T9910 T9909 pobj water,in
R4842 T9911 T9908 cc and,rinsed
R4843 T9912 T9908 conj embedded,rinsed
R4844 T9913 T9912 prep in,embedded
R4845 T9914 T9913 pobj gelvatol,in
R4846 T9915 T9916 punct [,36
R4847 T9916 T9912 parataxis 36,embedded
R4848 T9917 T9916 punct ],36
R4849 T9918 T9869 punct .,incubated

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9600 95-103 GO:0042571 denotes antibody
T9601 197-202 CHEBI:15377 denotes water
T9602 219-227 CHEBI_EXT:poly_vinyl_alcohol denotes gelvatol

biosemtest

Id Subject Object Predicate Lexical cue
T9147 25-28 UMLS/C0032704 denotes fo
T9148 150-153 UMLS/C0032704 denotes an
T9164 141-146 UMLS/C0392761 denotes es in
T9165 164-169 UMLS/C0392761 denotes es in
T9174 141-146 UMLS/C1632851 denotes es in
T9175 164-169 UMLS/C1632851 denotes es in
T9182 141-146 UMLS/C1547403 denotes es in
T9183 164-169 UMLS/C1547403 denotes es in
T9185 49-55 UMLS/C1705201 denotes des we
T9187 190-196 UMLS/C1882955 denotes sed in
T9198 10-14 UMLS/C1533153 denotes e wa
T9201 88-97 UMLS/C0027627 denotes ondary an
T9212 110-126 UMLS/C2348236 denotes m temperature, w
T9220 141-146 UMLS/C1548318 denotes es in
T9221 164-169 UMLS/C1548318 denotes es in
T9231 98-106 UMLS/C0021027 denotes ibody at
T9257 4-9 UMLS/C0687676 denotes er fi
T9261 190-196 UMLS/C1701810 denotes sed in
T9265 35-38 UMLS/C0702093 denotes ea
T9266 180-183 UMLS/C0702093 denotes ea
T9287 49-55 UMLS/C0444330 denotes des we
T9290 35-38 UMLS/C1552937 denotes ea
T9291 180-183 UMLS/C1552937 denotes ea
T9298 15-21 UMLS/C1548982 denotes hes in
T9299 128-134 UMLS/C1548982 denotes hed th
T9312 141-146 UMLS/C0040223 denotes es in
T9313 164-169 UMLS/C0040223 denotes es in
T9318 141-146 UMLS/C0449243 denotes es in
T9319 164-169 UMLS/C0449243 denotes es in
T9346 98-106 UMLS/C1621287 denotes ibody at
T9369 61-70 UMLS/C1439852 denotes ubated fo
T9375 88-97 UMLS/C0205436 denotes ondary an
T9379 10-14 UMLS/C0205451 denotes e wa
T9383 135-140 UMLS/C0205449 denotes ee ti
T9384 158-163 UMLS/C0205449 denotes ee ti
T9386 210-218 UMLS/C1707903 denotes edded in
T9398 88-97 UMLS/C1522484 denotes ondary an
T9408 88-97 UMLS/C0175668 denotes ondary an
T9412 141-146 UMLS/C1704250 denotes es in
T9413 164-169 UMLS/C1704250 denotes es in
T9441 173-176 UMLS/C1720830 denotes , 5
T9459 35-38 UMLS/C0439232 denotes ea
T9460 180-183 UMLS/C0439232 denotes ea
T9471 4-9 UMLS/C0231290 denotes er fi
T9482 98-106 UMLS/C0003241 denotes ibody at
T9488 49-55 UMLS/C0332246 denotes des we

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9542 95-103 GO:0042571 denotes antibody
T9543 197-202 CHEBI:15377 denotes water