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PMC:1087847 / 34795-34991 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T9802 0-196 sentence denotes After additional three washes with PBS, non-specific binding sites were blocked by incubating the slides with PBG (0.5 % BSA, 0.045 % fish gelatine in PBS) in 10% normal goat serum (NGS) for 2 h.
T9803 1-6 IN denotes After
T9804 73-80 VBN denotes blocked
T9805 7-17 JJ denotes additional
T9806 24-30 NNS denotes washes
T9807 18-23 CD denotes three
T9808 31-35 IN denotes with
T9809 36-39 NN denotes PBS
T9810 39-41 , denotes ,
T9811 41-53 JJ denotes non-specific
T9812 62-67 NNS denotes sites
T9813 54-61 NN denotes binding
T9814 68-72 VBD denotes were
T9815 81-83 IN denotes by
T9816 84-94 VBG denotes incubating
T9817 95-98 DT denotes the
T9818 99-105 NNS denotes slides
T9819 106-110 IN denotes with
T9820 111-114 NN denotes PBG
T9821 115-116 -LRB- denotes (
T9822 122-125 NN denotes BSA
T9823 116-119 CD denotes 0.5
T9824 120-121 NN denotes %
T9825 125-127 , denotes ,
T9826 127-132 CD denotes 0.045
T9827 133-134 NN denotes %
T9828 140-148 NN denotes gelatine
T9829 135-139 NN denotes fish
T9830 149-151 IN denotes in
T9831 152-155 NN denotes PBS
T9832 155-156 -RRB- denotes )
T9833 157-159 IN denotes in
T9834 160-162 CD denotes 10
T9835 162-163 NN denotes %
T9836 164-170 JJ denotes normal
T9837 176-181 NN denotes serum
T9838 171-175 NN denotes goat
T9839 182-183 -LRB- denotes (
T9840 183-186 NN denotes NGS
T9841 186-187 -RRB- denotes )
T9842 188-191 IN denotes for
T9843 192-193 CD denotes 2
T9844 194-195 NN denotes h
T9845 195-196 . denotes .
R4739 T9803 T9804 prep After,blocked
R4740 T9805 T9806 amod additional,washes
R4741 T9806 T9803 pobj washes,After
R4742 T9807 T9806 nummod three,washes
R4743 T9808 T9806 prep with,washes
R4744 T9809 T9808 pobj PBS,with
R4745 T9810 T9804 punct ", ",blocked
R4746 T9811 T9812 amod non-specific,sites
R4747 T9812 T9804 nsubjpass sites,blocked
R4748 T9813 T9812 compound binding,sites
R4749 T9814 T9804 auxpass were,blocked
R4750 T9815 T9804 prep by,blocked
R4751 T9816 T9815 pcomp incubating,by
R4752 T9817 T9818 det the,slides
R4753 T9818 T9816 dobj slides,incubating
R4754 T9819 T9816 prep with,incubating
R4755 T9820 T9819 pobj PBG,with
R4756 T9821 T9822 punct (,BSA
R4757 T9822 T9820 parataxis BSA,PBG
R4758 T9823 T9824 nummod 0.5,%
R4759 T9824 T9822 compound %,BSA
R4760 T9825 T9822 punct ", ",BSA
R4761 T9826 T9827 nummod 0.045,%
R4762 T9827 T9828 compound %,gelatine
R4763 T9828 T9822 appos gelatine,BSA
R4764 T9829 T9828 compound fish,gelatine
R4765 T9830 T9822 prep in,BSA
R4766 T9831 T9830 pobj PBS,in
R4767 T9832 T9822 punct ),BSA
R4768 T9833 T9816 prep in,incubating
R4769 T9834 T9835 nummod 10,%
R4770 T9835 T9833 pobj %,in
R4771 T9836 T9837 amod normal,serum
R4772 T9837 T9835 appos serum,%
R4773 T9838 T9837 compound goat,serum
R4774 T9839 T9837 punct (,serum
R4775 T9840 T9837 appos NGS,serum
R4776 T9841 T9835 punct ),%
R4777 T9842 T9816 prep for,incubating
R4778 T9843 T9844 nummod 2,h
R4779 T9844 T9842 pobj h,for
R4780 T9845 T9804 punct .,blocked

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9593 54-61 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T9594 54-67 SO_EXT:0000409 denotes binding sites
T9595 135-139 NCBITaxon_EXT:fish denotes fish
T9596 140-148 CHEBI:5291 denotes gelatine
T9597 171-175 NCBITaxon:9925 denotes goat
T9598 176-181 UBERON:0001977 denotes serum

biosemtest

Id Subject Object Predicate Lexical cue
T9145 113-116 UMLS/C0032704 denotes G (
T9150 166-172 UMLS/C1551394 denotes rmal g
T9158 75-82 UMLS/C0233660 denotes ocked b
T9159 166-172 UMLS/C1550457 denotes rmal g
T9161 75-82 UMLS/C0028778 denotes ocked b
T9171 137-141 UMLS/C0016163 denotes sh g
T9172 166-172 UMLS/C1704701 denotes rmal g
T9184 101-107 UMLS/C1705201 denotes ides w
T9194 75-82 UMLS/C1533157 denotes ocked b
T9216 142-150 UMLS/C1145617 denotes latine i
T9222 142-150 UMLS/C0017237 denotes latine i
T9223 75-82 UMLS/C1706084 denotes ocked b
T9235 75-82 UMLS/C0332206 denotes ocked b
T9242 124-127 UMLS/C1511233 denotes A,
T9247 124-127 UMLS/C0036774 denotes A,
T9256 3-8 UMLS/C0687676 denotes ter a
T9267 124-127 UMLS/C0005902 denotes A,
T9269 9-19 UMLS/C1524062 denotes ditional t
T9280 173-177 UMLS/C1510458 denotes at s
T9286 101-107 UMLS/C0444330 denotes ides w
T9294 56-69 UMLS/C0682969 denotes nding sites w
T9295 178-183 UMLS/C1546774 denotes rum (
T9297 26-32 UMLS/C1548982 denotes shes w
T9309 178-183 UMLS/C0229671 denotes rum (
T9321 43-55 UMLS/C0205370 denotes n-specific b
T9353 166-172 UMLS/C1873497 denotes rmal g
T9368 86-96 UMLS/C1439852 denotes cubating t
T9382 20-25 UMLS/C0205449 denotes ree w
T9385 178-183 UMLS/C1550100 denotes rum (
T9404 124-127 UMLS/C0487992 denotes A,
T9405 166-172 UMLS/C0439166 denotes rmal g
T9422 56-69 UMLS/C0005456 denotes nding sites w
T9429 173-177 UMLS/C0018019 denotes at s
T9436 166-172 UMLS/C2347086 denotes rmal g
T9439 38-41 UMLS/C1720830 denotes S,
T9440 154-157 UMLS/C1720830 denotes S)
T9446 173-177 UMLS/C1265549 denotes at s
T9463 124-127 UP/P02769 denotes A,
T9464 137-141 UMLS/C2349190 denotes sh g
T9467 178-183 UMLS/C1151254 denotes rum (
T9470 3-8 UMLS/C0231290 denotes ter a
T9474 166-172 UMLS/C0205307 denotes rmal g
T9487 101-107 UMLS/C0332246 denotes ides w
T9496 137-141 UMLS/C1696695 denotes sh g

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9537 54-67 SO:0000409 denotes binding sites
T9538 140-148 CHEBI:5291 denotes gelatine
T9539 171-175 NCBITaxon:9925 denotes goat
T9540 176-181 UBERON:0001977 denotes serum