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PMC:1087847 / 34350-35575 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T9710 0-3 DT denotes The
T9711 22-30 NNS denotes sections
T9712 4-12 NN denotes paraffin
T9713 13-21 VBN denotes embedded
T9714 12-13 HYPH denotes -
T9715 42-49 VBN denotes treated
T9716 31-35 VBD denotes were
T9717 36-41 RB denotes first
T9718 50-55 CD denotes three
T9719 56-61 NNS denotes times
T9720 62-65 IN denotes for
T9721 66-67 CD denotes 2
T9722 68-71 NN denotes min
T9723 72-74 IN denotes in
T9724 75-81 NN denotes xylene
T9725 82-84 TO denotes to
T9726 85-91 VB denotes remove
T9727 92-100 NN denotes paraffin
T9728 101-104 CC denotes and
T9729 105-109 RB denotes then
T9730 110-120 VBD denotes rehydrated
T9731 121-125 NN denotes step
T9732 126-128 IN denotes by
T9733 129-133 NN denotes step
T9734 134-138 IN denotes with
T9735 139-149 VBG denotes descending
T9736 150-164 NNS denotes concentrations
T9737 165-167 IN denotes of
T9738 168-175 NN denotes ethanol
T9739 176-179 IN denotes for
T9740 180-188 NN denotes antibody
T9741 189-197 NN denotes staining
T9742 198-199 -LRB- denotes [
T9743 199-201 CD denotes 35
T9744 201-202 -RRB- denotes ]
T9745 202-203 . denotes .
T9746 203-445 sentence denotes After three washings in PBS (137 mM NaCl, 2.7 mM KCl, 8.1 mM Na2HPO4, 1.5 mM KH2PO4, pH 7.4), the tissue sections were incubated in PBS containing 0.1% trypsin for 10 min at room temperature to free formaldehyde-crosslinked epitopes [15-17].
T9747 204-209 IN denotes After
T9748 323-332 VBN denotes incubated
T9749 210-215 CD denotes three
T9750 216-224 NNS denotes washings
T9751 225-227 IN denotes in
T9752 228-231 NN denotes PBS
T9753 232-233 -LRB- denotes (
T9754 240-244 NN denotes NaCl
T9755 233-236 CD denotes 137
T9756 237-239 NN denotes mM
T9757 244-246 , denotes ,
T9758 246-249 CD denotes 2.7
T9759 250-252 NN denotes mM
T9760 253-256 NN denotes KCl
T9761 256-258 , denotes ,
T9762 258-261 CD denotes 8.1
T9763 262-264 NN denotes mM
T9764 265-272 NN denotes Na2HPO4
T9765 272-274 , denotes ,
T9766 274-277 CD denotes 1.5
T9767 278-280 NN denotes mM
T9768 281-287 NN denotes KH2PO4
T9769 287-289 , denotes ,
T9770 289-291 NN denotes pH
T9771 292-295 CD denotes 7.4
T9772 295-296 -RRB- denotes )
T9773 296-298 , denotes ,
T9774 298-301 DT denotes the
T9775 309-317 NNS denotes sections
T9776 302-308 NN denotes tissue
T9777 318-322 VBD denotes were
T9778 333-335 IN denotes in
T9779 336-339 NN denotes PBS
T9780 340-350 VBG denotes containing
T9781 351-354 CD denotes 0.1
T9782 354-355 NN denotes %
T9783 356-363 NN denotes trypsin
T9784 364-367 IN denotes for
T9785 368-370 CD denotes 10
T9786 371-374 NN denotes min
T9787 375-377 IN denotes at
T9788 378-382 NN denotes room
T9789 383-394 NN denotes temperature
T9790 395-397 TO denotes to
T9791 398-402 VB denotes free
T9792 403-415 NN denotes formaldehyde
T9793 416-427 VBN denotes crosslinked
T9794 415-416 HYPH denotes -
T9795 428-436 NNS denotes epitopes
T9796 437-438 -LRB- denotes [
T9797 438-440 CD denotes 15
T9798 440-441 SYM denotes -
T9799 441-443 CD denotes 17
T9800 443-444 -RRB- denotes ]
T9801 444-445 . denotes .
T9802 445-641 sentence denotes After additional three washes with PBS, non-specific binding sites were blocked by incubating the slides with PBG (0.5 % BSA, 0.045 % fish gelatine in PBS) in 10% normal goat serum (NGS) for 2 h.
T9803 446-451 IN denotes After
T9804 518-525 VBN denotes blocked
T9805 452-462 JJ denotes additional
T9806 469-475 NNS denotes washes
T9807 463-468 CD denotes three
T9808 476-480 IN denotes with
T9809 481-484 NN denotes PBS
T9810 484-486 , denotes ,
T9811 486-498 JJ denotes non-specific
T9812 507-512 NNS denotes sites
T9813 499-506 NN denotes binding
T9814 513-517 VBD denotes were
T9815 526-528 IN denotes by
T9816 529-539 VBG denotes incubating
T9817 540-543 DT denotes the
T9818 544-550 NNS denotes slides
T9819 551-555 IN denotes with
T9820 556-559 NN denotes PBG
T9821 560-561 -LRB- denotes (
T9822 567-570 NN denotes BSA
T9823 561-564 CD denotes 0.5
T9824 565-566 NN denotes %
T9825 570-572 , denotes ,
T9826 572-577 CD denotes 0.045
T9827 578-579 NN denotes %
T9828 585-593 NN denotes gelatine
T9829 580-584 NN denotes fish
T9830 594-596 IN denotes in
T9831 597-600 NN denotes PBS
T9832 600-601 -RRB- denotes )
T9833 602-604 IN denotes in
T9834 605-607 CD denotes 10
T9835 607-608 NN denotes %
T9836 609-615 JJ denotes normal
T9837 621-626 NN denotes serum
T9838 616-620 NN denotes goat
T9839 627-628 -LRB- denotes (
T9840 628-631 NN denotes NGS
T9841 631-632 -RRB- denotes )
T9842 633-636 IN denotes for
T9843 637-638 CD denotes 2
T9844 639-640 NN denotes h
T9845 640-641 . denotes .
T9846 641-753 sentence denotes Incubation with the primary antibodies was performed at 4°C overnight diluted in PBG supplemented with 1 % NGS.
T9847 642-652 NN denotes Incubation
T9848 712-719 VBN denotes diluted
T9849 653-657 IN denotes with
T9850 658-661 DT denotes the
T9851 670-680 NNS denotes antibodies
T9852 662-669 JJ denotes primary
T9853 681-684 VBD denotes was
T9854 685-694 VBN denotes performed
T9855 695-697 IN denotes at
T9856 698-699 CD denotes 4
T9857 699-701 NN denotes °C
T9858 702-711 RB denotes overnight
T9859 720-722 IN denotes in
T9860 723-726 NN denotes PBG
T9861 727-739 VBN denotes supplemented
T9862 740-744 IN denotes with
T9863 745-746 CD denotes 1
T9864 747-748 NN denotes %
T9865 749-752 NN denotes NGS
T9866 752-753 . denotes .
T9867 753-986 sentence denotes After five washes in PBG for 5 min each, the slides were incubated for 1 h with the secondary antibody at room temperature, washed three times in PBG and three times in PBS, 5 min each, rinsed in water and embedded in gelvatol [36].
T9868 754-759 IN denotes After
T9869 811-820 VBN denotes incubated
T9870 760-764 CD denotes five
T9871 765-771 NNS denotes washes
T9872 772-774 IN denotes in
T9873 775-778 NN denotes PBG
T9874 779-782 IN denotes for
T9875 783-784 CD denotes 5
T9876 785-788 NN denotes min
T9877 789-793 DT denotes each
T9878 793-795 , denotes ,
T9879 795-798 DT denotes the
T9880 799-805 NNS denotes slides
T9881 806-810 VBD denotes were
T9882 821-824 IN denotes for
T9883 825-826 CD denotes 1
T9884 827-828 NN denotes h
T9885 829-833 IN denotes with
T9886 834-837 DT denotes the
T9887 848-856 NN denotes antibody
T9888 838-847 JJ denotes secondary
T9889 857-859 IN denotes at
T9890 860-864 NN denotes room
T9891 865-876 NN denotes temperature
T9892 876-878 , denotes ,
T9893 878-884 VBD denotes washed
T9894 885-890 CD denotes three
T9895 891-896 NNS denotes times
T9896 897-899 IN denotes in
T9897 900-903 NN denotes PBG
T9898 904-907 CC denotes and
T9899 908-913 CD denotes three
T9900 914-919 NNS denotes times
T9901 920-922 IN denotes in
T9902 923-926 NN denotes PBS
T9903 926-928 , denotes ,
T9904 928-929 CD denotes 5
T9905 930-933 NNS denotes min
T9906 934-938 DT denotes each
T9907 938-940 , denotes ,
T9908 940-946 VBN denotes rinsed
T9909 947-949 IN denotes in
T9910 950-955 NN denotes water
T9911 956-959 CC denotes and
T9912 960-968 VBN denotes embedded
T9913 969-971 IN denotes in
T9914 972-980 NN denotes gelvatol
T9915 981-982 -LRB- denotes [
T9916 982-984 CD denotes 36
T9917 984-985 -RRB- denotes ]
T9918 985-986 . denotes .
T9919 986-1127 sentence denotes For control, sections were incubated only with the secondary antibody or sections obtained from an annexin A7 knockout mouse were used [10].
T9920 987-990 IN denotes For
T9921 1014-1023 VBN denotes incubated
T9922 991-998 NN denotes control
T9923 998-1000 , denotes ,
T9924 1000-1008 NNS denotes sections
T9925 1009-1013 VBD denotes were
T9926 1024-1028 RB denotes only
T9927 1029-1033 IN denotes with
T9928 1034-1037 DT denotes the
T9929 1048-1056 NN denotes antibody
T9930 1038-1047 JJ denotes secondary
T9931 1057-1059 CC denotes or
T9932 1060-1068 NNS denotes sections
T9933 1117-1121 VBN denotes used
T9934 1069-1077 VBN denotes obtained
T9935 1078-1082 IN denotes from
T9936 1083-1085 DT denotes an
T9937 1106-1111 NN denotes mouse
T9938 1086-1093 NN denotes annexin
T9939 1094-1096 NN denotes A7
T9940 1097-1105 NN denotes knockout
T9941 1112-1116 VBD denotes were
T9942 1122-1123 -LRB- denotes [
T9943 1123-1125 CD denotes 10
T9944 1125-1126 -RRB- denotes ]
T9945 1126-1127 . denotes .
T9946 1127-1225 sentence denotes Samples were examined with a confocal laser scan microscope (Leica TCS SP; Leica, Bensheim, FRG).
T9947 1128-1135 NNS denotes Samples
T9948 1141-1149 VBN denotes examined
T9949 1136-1140 VBD denotes were
T9950 1150-1154 IN denotes with
T9951 1155-1156 DT denotes a
T9952 1177-1187 NN denotes microscope
T9953 1157-1165 JJ denotes confocal
T9954 1166-1171 NN denotes laser
T9955 1172-1176 NN denotes scan
T9956 1188-1189 -LRB- denotes (
T9957 1199-1201 NN denotes SP
T9958 1189-1194 NNP denotes Leica
T9959 1195-1198 NN denotes TCS
T9960 1201-1202 : denotes ;
T9961 1203-1208 NNP denotes Leica
T9962 1208-1210 , denotes ,
T9963 1210-1218 NNP denotes Bensheim
T9964 1218-1220 , denotes ,
T9965 1220-1223 NNP denotes FRG
T9966 1223-1224 -RRB- denotes )
T9967 1224-1225 . denotes .
R4650 T9710 T9711 det The,sections
R4651 T9711 T9715 nsubjpass sections,treated
R4652 T9712 T9713 npadvmod paraffin,embedded
R4653 T9713 T9711 amod embedded,sections
R4654 T9714 T9713 punct -,embedded
R4655 T9716 T9715 auxpass were,treated
R4656 T9717 T9715 advmod first,treated
R4657 T9718 T9719 nummod three,times
R4658 T9719 T9715 npadvmod times,treated
R4659 T9720 T9715 prep for,treated
R4660 T9721 T9722 nummod 2,min
R4661 T9722 T9720 pobj min,for
R4662 T9723 T9715 prep in,treated
R4663 T9724 T9723 pobj xylene,in
R4664 T9725 T9726 aux to,remove
R4665 T9726 T9715 advcl remove,treated
R4666 T9727 T9726 dobj paraffin,remove
R4667 T9728 T9715 cc and,treated
R4668 T9729 T9730 advmod then,rehydrated
R4669 T9730 T9715 conj rehydrated,treated
R4670 T9731 T9730 npadvmod step,rehydrated
R4671 T9732 T9731 prep by,step
R4672 T9733 T9732 pobj step,by
R4673 T9734 T9730 prep with,rehydrated
R4674 T9735 T9736 amod descending,concentrations
R4675 T9736 T9734 pobj concentrations,with
R4676 T9737 T9736 prep of,concentrations
R4677 T9738 T9737 pobj ethanol,of
R4678 T9739 T9730 prep for,rehydrated
R4679 T9740 T9741 compound antibody,staining
R4680 T9741 T9739 pobj staining,for
R4681 T9742 T9743 punct [,35
R4682 T9743 T9730 parataxis 35,rehydrated
R4683 T9744 T9743 punct ],35
R4684 T9745 T9715 punct .,treated
R4685 T9747 T9748 prep After,incubated
R4686 T9749 T9750 nummod three,washings
R4687 T9750 T9747 pobj washings,After
R4688 T9751 T9750 prep in,washings
R4689 T9752 T9751 pobj PBS,in
R4690 T9753 T9754 punct (,NaCl
R4691 T9754 T9750 parataxis NaCl,washings
R4692 T9755 T9756 nummod 137,mM
R4693 T9756 T9754 compound mM,NaCl
R4694 T9757 T9754 punct ", ",NaCl
R4695 T9758 T9759 nummod 2.7,mM
R4696 T9759 T9760 compound mM,KCl
R4697 T9760 T9754 appos KCl,NaCl
R4698 T9761 T9754 punct ", ",NaCl
R4699 T9762 T9763 nummod 8.1,mM
R4700 T9763 T9764 compound mM,Na2HPO4
R4701 T9764 T9754 appos Na2HPO4,NaCl
R4702 T9765 T9754 punct ", ",NaCl
R4703 T9766 T9767 nummod 1.5,mM
R4704 T9767 T9768 compound mM,KH2PO4
R4705 T9768 T9754 appos KH2PO4,NaCl
R4706 T9769 T9754 punct ", ",NaCl
R4707 T9770 T9754 npadvmod pH,NaCl
R4708 T9771 T9770 nummod 7.4,pH
R4709 T9772 T9754 punct ),NaCl
R4710 T9773 T9748 punct ", ",incubated
R4711 T9774 T9775 det the,sections
R4712 T9775 T9748 nsubjpass sections,incubated
R4713 T9776 T9775 compound tissue,sections
R4714 T9777 T9748 auxpass were,incubated
R4715 T9778 T9748 prep in,incubated
R4716 T9779 T9778 pobj PBS,in
R4717 T9780 T9779 acl containing,PBS
R4718 T9781 T9782 nummod 0.1,%
R4719 T9782 T9783 compound %,trypsin
R4720 T9783 T9780 dobj trypsin,containing
R4721 T9784 T9748 prep for,incubated
R4722 T9785 T9786 nummod 10,min
R4723 T9786 T9784 pobj min,for
R4724 T9787 T9748 prep at,incubated
R4725 T9788 T9789 compound room,temperature
R4726 T9789 T9787 pobj temperature,at
R4727 T9790 T9791 aux to,free
R4728 T9791 T9748 advcl free,incubated
R4729 T9792 T9793 npadvmod formaldehyde,crosslinked
R4730 T9793 T9795 amod crosslinked,epitopes
R4731 T9794 T9793 punct -,crosslinked
R4732 T9795 T9791 dobj epitopes,free
R4733 T9796 T9797 punct [,15
R4734 T9797 T9748 parataxis 15,incubated
R4735 T9798 T9799 punct -,17
R4736 T9799 T9797 prep 17,15
R4737 T9800 T9797 punct ],15
R4738 T9801 T9748 punct .,incubated
R4739 T9803 T9804 prep After,blocked
R4740 T9805 T9806 amod additional,washes
R4741 T9806 T9803 pobj washes,After
R4742 T9807 T9806 nummod three,washes
R4743 T9808 T9806 prep with,washes
R4744 T9809 T9808 pobj PBS,with
R4745 T9810 T9804 punct ", ",blocked
R4746 T9811 T9812 amod non-specific,sites
R4747 T9812 T9804 nsubjpass sites,blocked
R4748 T9813 T9812 compound binding,sites
R4749 T9814 T9804 auxpass were,blocked
R4750 T9815 T9804 prep by,blocked
R4751 T9816 T9815 pcomp incubating,by
R4752 T9817 T9818 det the,slides
R4753 T9818 T9816 dobj slides,incubating
R4754 T9819 T9816 prep with,incubating
R4755 T9820 T9819 pobj PBG,with
R4756 T9821 T9822 punct (,BSA
R4757 T9822 T9820 parataxis BSA,PBG
R4758 T9823 T9824 nummod 0.5,%
R4759 T9824 T9822 compound %,BSA
R4760 T9825 T9822 punct ", ",BSA
R4761 T9826 T9827 nummod 0.045,%
R4762 T9827 T9828 compound %,gelatine
R4763 T9828 T9822 appos gelatine,BSA
R4764 T9829 T9828 compound fish,gelatine
R4765 T9830 T9822 prep in,BSA
R4766 T9831 T9830 pobj PBS,in
R4767 T9832 T9822 punct ),BSA
R4768 T9833 T9816 prep in,incubating
R4769 T9834 T9835 nummod 10,%
R4770 T9835 T9833 pobj %,in
R4771 T9836 T9837 amod normal,serum
R4772 T9837 T9835 appos serum,%
R4773 T9838 T9837 compound goat,serum
R4774 T9839 T9837 punct (,serum
R4775 T9840 T9837 appos NGS,serum
R4776 T9841 T9835 punct ),%
R4777 T9842 T9816 prep for,incubating
R4778 T9843 T9844 nummod 2,h
R4779 T9844 T9842 pobj h,for
R4780 T9845 T9804 punct .,blocked
R4781 T9847 T9848 nsubjpass Incubation,diluted
R4782 T9849 T9847 prep with,Incubation
R4783 T9850 T9851 det the,antibodies
R4784 T9851 T9849 pobj antibodies,with
R4785 T9852 T9851 amod primary,antibodies
R4786 T9853 T9848 auxpass was,diluted
R4787 T9854 T9848 aux performed,diluted
R4788 T9855 T9848 prep at,diluted
R4789 T9856 T9857 nummod 4,°C
R4790 T9857 T9855 pobj °C,at
R4791 T9858 T9848 advmod overnight,diluted
R4792 T9859 T9848 prep in,diluted
R4793 T9860 T9859 pobj PBG,in
R4794 T9861 T9860 acl supplemented,PBG
R4795 T9862 T9861 prep with,supplemented
R4796 T9863 T9864 nummod 1,%
R4797 T9864 T9865 compound %,NGS
R4798 T9865 T9862 pobj NGS,with
R4799 T9866 T9848 punct .,diluted
R4800 T9868 T9869 prep After,incubated
R4801 T9870 T9871 nummod five,washes
R4802 T9871 T9868 pobj washes,After
R4803 T9872 T9871 prep in,washes
R4804 T9873 T9872 pobj PBG,in
R4805 T9874 T9871 prep for,washes
R4806 T9875 T9876 nummod 5,min
R4807 T9876 T9874 pobj min,for
R4808 T9877 T9876 appos each,min
R4809 T9878 T9869 punct ", ",incubated
R4810 T9879 T9880 det the,slides
R4811 T9880 T9869 nsubjpass slides,incubated
R4812 T9881 T9869 auxpass were,incubated
R4813 T9882 T9869 prep for,incubated
R4814 T9883 T9884 nummod 1,h
R4815 T9884 T9882 pobj h,for
R4816 T9885 T9869 prep with,incubated
R4817 T9886 T9887 det the,antibody
R4818 T9887 T9885 pobj antibody,with
R4819 T9888 T9887 amod secondary,antibody
R4820 T9889 T9869 prep at,incubated
R4821 T9890 T9891 compound room,temperature
R4822 T9891 T9889 pobj temperature,at
R4823 T9892 T9869 punct ", ",incubated
R4824 T9893 T9869 conj washed,incubated
R4825 T9894 T9895 nummod three,times
R4826 T9895 T9893 npadvmod times,washed
R4827 T9896 T9893 prep in,washed
R4828 T9897 T9896 pobj PBG,in
R4829 T9898 T9893 cc and,washed
R4830 T9899 T9900 nummod three,times
R4831 T9900 T9893 conj times,washed
R4832 T9901 T9900 prep in,times
R4833 T9902 T9901 pobj PBS,in
R4834 T9903 T9893 punct ", ",washed
R4835 T9904 T9905 nummod 5,min
R4836 T9905 T9893 npadvmod min,washed
R4837 T9906 T9905 appos each,min
R4838 T9907 T9893 punct ", ",washed
R4839 T9908 T9893 conj rinsed,washed
R4840 T9909 T9908 prep in,rinsed
R4841 T9910 T9909 pobj water,in
R4842 T9911 T9908 cc and,rinsed
R4843 T9912 T9908 conj embedded,rinsed
R4844 T9913 T9912 prep in,embedded
R4845 T9914 T9913 pobj gelvatol,in
R4846 T9915 T9916 punct [,36
R4847 T9916 T9912 parataxis 36,embedded
R4848 T9917 T9916 punct ],36
R4849 T9918 T9869 punct .,incubated
R4850 T9920 T9921 prep For,incubated
R4851 T9922 T9920 pobj control,For
R4852 T9923 T9921 punct ", ",incubated
R4853 T9924 T9921 nsubjpass sections,incubated
R4854 T9925 T9921 auxpass were,incubated
R4855 T9926 T9927 advmod only,with
R4856 T9927 T9921 prep with,incubated
R4857 T9928 T9929 det the,antibody
R4858 T9929 T9927 pobj antibody,with
R4859 T9930 T9929 amod secondary,antibody
R4860 T9931 T9921 cc or,incubated
R4861 T9932 T9933 nsubjpass sections,used
R4862 T9933 T9921 conj used,incubated
R4863 T9934 T9932 acl obtained,sections
R4864 T9935 T9934 prep from,obtained
R4865 T9936 T9937 det an,mouse
R4866 T9937 T9935 pobj mouse,from
R4867 T9938 T9939 compound annexin,A7
R4868 T9939 T9937 compound A7,mouse
R4869 T9940 T9937 compound knockout,mouse
R4870 T9941 T9933 auxpass were,used
R4871 T9942 T9943 punct [,10
R4872 T9943 T9933 parataxis 10,used
R4873 T9944 T9943 punct ],10
R4874 T9945 T9921 punct .,incubated
R4875 T9947 T9948 nsubjpass Samples,examined
R4876 T9949 T9948 auxpass were,examined
R4877 T9950 T9948 prep with,examined
R4878 T9951 T9952 det a,microscope
R4879 T9952 T9950 pobj microscope,with
R4880 T9953 T9952 amod confocal,microscope
R4881 T9954 T9952 compound laser,microscope
R4882 T9955 T9952 compound scan,microscope
R4883 T9956 T9957 punct (,SP
R4884 T9957 T9952 parataxis SP,microscope
R4885 T9958 T9957 compound Leica,SP
R4886 T9959 T9957 compound TCS,SP
R4887 T9960 T9957 punct ;,SP
R4888 T9961 T9957 appos Leica,SP
R4889 T9962 T9961 punct ", ",Leica
R4890 T9963 T9961 npadvmod Bensheim,Leica
R4891 T9964 T9961 punct ", ",Leica
R4892 T9965 T9961 npadvmod FRG,Leica
R4893 T9966 T9957 punct ),SP
R4894 T9967 T9948 punct .,examined

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T9582 75-81 CHEBI:27338 denotes xylene
T9583 168-175 CHEBI:16236 denotes ethanol
T9584 180-188 GO:0042571 denotes antibody
T9585 240-244 CHEBI:26710 denotes NaCl
T9586 253-256 CHEBI:32588 denotes KCl
T9587 265-272 CHEBI:34683 denotes Na2HPO4
T9588 281-287 CHEBI:63036 denotes KH2PO4
T9589 302-308 UBERON:0000479 denotes tissue
T9590 356-363 PR_EXT:000027795 denotes trypsin
T9591 403-415 CHEBI:16842 denotes formaldehyde
T9592 428-436 CHEBI_SO_EXT:epitope denotes epitopes
T9593 499-506 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T9594 499-512 SO_EXT:0000409 denotes binding sites
T9595 580-584 NCBITaxon_EXT:fish denotes fish
T9596 585-593 CHEBI:5291 denotes gelatine
T9597 616-620 NCBITaxon:9925 denotes goat
T9598 621-626 UBERON:0001977 denotes serum
T9599 670-680 GO:0042571 denotes antibodies
T9600 848-856 GO:0042571 denotes antibody
T9601 950-955 CHEBI:15377 denotes water
T9602 972-980 CHEBI_EXT:poly_vinyl_alcohol denotes gelvatol
T9603 1048-1056 GO:0042571 denotes antibody
T9604 1086-1096 PR_EXT:000004080 denotes annexin A7
T9605 1106-1111 NCBITaxon:10088 denotes mouse

biosemtest

Id Subject Object Predicate Lexical cue
T9144 994-1001 UMLS/C1882979 denotes trol, s
T9145 558-561 UMLS/C0032704 denotes G (
T9146 726-729 UMLS/C0032704 denotes su
T9147 778-781 UMLS/C0032704 denotes fo
T9148 903-906 UMLS/C0032704 denotes an
T9149 358-365 UP/P00761 denotes ypsin f
T9150 611-617 UMLS/C1551394 denotes rmal g
T9154 191-199 UMLS/C1704680 denotes aining [
T9158 520-527 UMLS/C0233660 denotes ocked b
T9159 611-617 UMLS/C1550457 denotes rmal g
T9160 730-742 UMLS/C0242295 denotes plemented wi
T9161 520-527 UMLS/C0028778 denotes ocked b
T9162 1144-1152 UMLS/C0332128 denotes mined wi
T9163 58-63 UMLS/C0392761 denotes mes f
T9164 894-899 UMLS/C0392761 denotes es in
T9165 917-922 UMLS/C0392761 denotes es in
T9166 94-102 UMLS/C0030415 denotes raffin a
T9167 715-722 UMLS/C1720119 denotes uted in
T9169 84-86 UMLS/C0319022 denotes r
T9170 397-399 UMLS/C0319022 denotes f
T9171 582-586 UMLS/C0016163 denotes sh g
T9172 611-617 UMLS/C1704701 denotes rmal g
T9173 58-63 UMLS/C1632851 denotes mes f
T9174 894-899 UMLS/C1632851 denotes es in
T9175 917-922 UMLS/C1632851 denotes es in
T9176 24-32 UMLS/C1705191 denotes ctions w
T9177 1003-1011 UMLS/C1705191 denotes tions we
T9178 1063-1071 UMLS/C1705191 denotes tions ob
T9181 58-63 UMLS/C1547403 denotes mes f
T9182 894-899 UMLS/C1547403 denotes es in
T9183 917-922 UMLS/C1547403 denotes es in
T9184 546-552 UMLS/C1705201 denotes ides w
T9185 802-808 UMLS/C1705201 denotes des we
T9186 358-365 UP/P35049 denotes ypsin f
T9187 943-949 UMLS/C1882955 denotes sed in
T9189 1089-1099 UP/Q07076 denotes exin A7 kn
T9190 358-365 UP/P81071 denotes ypsin f
T9192 358-365 UP/P35034 denotes ypsin f
T9193 1027-1031 UMLS/C0205171 denotes y wi
T9194 520-527 UMLS/C1533157 denotes ocked b
T9196 1089-1099 UP/P24639 denotes exin A7 kn
T9197 1169-1174 UMLS/C1023865 denotes er sc
T9198 763-767 UMLS/C1533153 denotes e wa
T9201 841-850 UMLS/C0027627 denotes ondary an
T9202 1041-1050 UMLS/C0027627 denotes ondary an
T9205 730-742 UMLS/C1947943 denotes plemented wi
T9206 24-32 UMLS/C0205155 denotes ctions w
T9207 1003-1011 UMLS/C0205155 denotes tions we
T9208 1063-1071 UMLS/C0205155 denotes tions ob
T9210 242-246 UMLS/C0037494 denotes Cl,
T9211 380-396 UMLS/C2348236 denotes om temperature t
T9212 863-879 UMLS/C2348236 denotes m temperature, w
T9213 123-127 UMLS/C1705117 denotes ep b
T9214 131-135 UMLS/C1705117 denotes ep w
T9215 170-177 UMLS/C0202304 denotes hanol f
T9216 587-595 UMLS/C1145617 denotes latine i
T9218 1089-1099 UP/P20072 denotes exin A7 kn
T9219 58-63 UMLS/C1548318 denotes mes f
T9220 894-899 UMLS/C1548318 denotes es in
T9221 917-922 UMLS/C1548318 denotes es in
T9222 587-595 UMLS/C0017237 denotes latine i
T9223 520-527 UMLS/C1706084 denotes ocked b
T9229 182-190 UMLS/C0021027 denotes tibody s
T9230 672-682 UMLS/C0021027 denotes tibodies w
T9231 851-859 UMLS/C0021027 denotes ibody at
T9232 1051-1059 UMLS/C0021027 denotes ibody or
T9233 358-365 UP/P24664 denotes ypsin f
T9235 520-527 UMLS/C0332206 denotes ocked b
T9236 687-696 UMLS/C1550369 denotes rformed a
T9237 358-365 UP/P19799 denotes ypsin f
T9238 1175-1179 UMLS/C0034606 denotes n mi
T9242 569-572 UMLS/C1511233 denotes A,
T9243 730-742 UMLS/C1549514 denotes plemented wi
T9244 358-365 UP/P51588 denotes ypsin f
T9245 1180-1190 UMLS/C0181839 denotes roscope (L
T9246 687-696 UMLS/C0884358 denotes rformed a
T9247 569-572 UMLS/C0036774 denotes A,
T9248 994-1001 UMLS/C0009932 denotes trol, s
T9249 358-365 UP/P35050 denotes ypsin f
T9251 291-293 UMLS/C0450407 denotes 7
T9252 291-293 UMLS/C0450408 denotes 7
T9253 242-246 UMLS/C1959973 denotes Cl,
T9254 291-293 UMLS/C0450409 denotes 7
T9255 206-211 UMLS/C0687676 denotes ter t
T9256 448-453 UMLS/C0687676 denotes ter a
T9257 757-762 UMLS/C0687676 denotes er fi
T9258 291-293 UMLS/C2363150 denotes 7
T9260 291-293 UMLS/C0031526 denotes 7
T9261 943-949 UMLS/C1701810 denotes sed in
T9262 1131-1138 UMLS/C0370003 denotes ples we
T9263 715-722 UMLS/C1948037 denotes uted in
T9264 70-73 UMLS/C0702093 denotes n i
T9265 788-791 UMLS/C0702093 denotes ea
T9266 933-936 UMLS/C0702093 denotes ea
T9267 569-572 UMLS/C0005902 denotes A,
T9268 1072-1080 UMLS/C1301820 denotes ained fr
T9269 454-464 UMLS/C1524062 denotes ditional t
T9272 358-365 UP/P00775 denotes ypsin f
T9274 1089-1099 UMLS/C0103408 denotes exin A7 kn
T9276 358-365 UP/P35051 denotes ypsin f
T9280 618-622 UMLS/C1510458 denotes at s
T9281 1175-1179 UMLS/C1954874 denotes n mi
T9284 1072-1080 UMLS/C1706701 denotes ained fr
T9285 1198-1201 UMLS/C0242387 denotes SP
T9286 546-552 UMLS/C0444330 denotes ides w
T9287 802-808 UMLS/C0444330 denotes des we
T9288 44-51 UMLS/C1292734 denotes eated t
T9289 70-73 UMLS/C1552937 denotes n i
T9290 788-791 UMLS/C1552937 denotes ea
T9291 933-936 UMLS/C1552937 denotes ea
T9292 291-293 UMLS/C1304686 denotes 7
T9294 501-514 UMLS/C0682969 denotes nding sites w
T9295 623-628 UMLS/C1546774 denotes rum (
T9296 1100-1114 UMLS/C0206745 denotes ckout mouse we
T9297 471-477 UMLS/C1548982 denotes shes w
T9298 768-774 UMLS/C1548982 denotes hes in
T9299 881-887 UMLS/C1548982 denotes hed th
T9300 1175-1179 UMLS/C0441633 denotes n mi
T9301 24-32 UMLS/C1552923 denotes ctions w
T9302 1003-1011 UMLS/C1552923 denotes tions we
T9303 1063-1071 UMLS/C1552923 denotes tions ob
T9304 24-32 UMLS/C1552924 denotes ctions w
T9305 1003-1011 UMLS/C1552924 denotes tions we
T9306 1063-1071 UMLS/C1552924 denotes tions ob
T9307 152-166 UMLS/C1446561 denotes ncentrations o
T9308 358-365 UP/P23916 denotes ypsin f
T9309 623-628 UMLS/C0229671 denotes rum (
T9310 994-1001 UMLS/C1550141 denotes trol, s
T9311 58-63 UMLS/C0040223 denotes mes f
T9312 894-899 UMLS/C0040223 denotes es in
T9313 917-922 UMLS/C0040223 denotes es in
T9314 141-151 UMLS/C1547177 denotes scending c
T9315 400-404 UMLS/C1996904 denotes ee f
T9316 218-226 UMLS/C0441648 denotes shings i
T9317 58-63 UMLS/C0449243 denotes mes f
T9318 894-899 UMLS/C0449243 denotes es in
T9319 917-922 UMLS/C0449243 denotes es in
T9321 488-500 UMLS/C0205370 denotes n-specific b
T9322 1131-1138 UMLS/C0441621 denotes ples we
T9325 1089-1099 UP/Q92125 denotes exin A7 kn
T9326 291-293 UMLS/C0020283 denotes 7
T9327 370-376 UMLS/C0456692 denotes min a
T9328 1169-1174 UMLS/C0023089 denotes er sc
T9330 358-365 UP/P35048 denotes ypsin f
T9331 77-83 UMLS/C0043367 denotes lene t
T9332 77-83 UMLS/C0043368 denotes lene t
T9333 358-365 UP/P83348 denotes ypsin f
T9334 644-654 UMLS/C1979572 denotes cubation w
T9338 141-151 UMLS/C0205386 denotes scending c
T9344 182-190 UMLS/C1621287 denotes tibody s
T9345 672-682 UMLS/C1621287 denotes tibodies w
T9346 851-859 UMLS/C1621287 denotes ibody at
T9347 1051-1059 UMLS/C1621287 denotes ibody or
T9348 705-714 UMLS/C0439583 denotes rnight di
T9349 1180-1190 UMLS/C1706379 denotes roscope (L
T9350 170-177 UMLS/C0001962 denotes hanol f
T9352 304-319 UMLS/C2316368 denotes ssue sections w
T9353 611-617 UMLS/C1873497 denotes rmal g
T9354 358-365 UP/O97399 denotes ypsin f
T9358 123-127 UMLS/C0454366 denotes ep b
T9359 131-135 UMLS/C0454366 denotes ep w
T9360 24-32 UMLS/C1552858 denotes ctions w
T9361 1003-1011 UMLS/C1552858 denotes tions we
T9362 1063-1071 UMLS/C1552858 denotes tions ob
T9363 994-1001 UMLS/C1547100 denotes trol, s
T9364 358-365 UMLS/C0041236 denotes ypsin f
T9366 191-199 UMLS/C0487602 denotes aining [
T9367 325-334 UMLS/C1439852 denotes cubated i
T9368 531-541 UMLS/C1439852 denotes cubating t
T9369 814-823 UMLS/C1439852 denotes ubated fo
T9370 1017-1026 UMLS/C1439852 denotes ubated on
T9371 400-404 UMLS/C1880497 denotes ee f
T9372 38-43 UMLS/C0205435 denotes rst t
T9375 841-850 UMLS/C0205436 denotes ondary an
T9376 1041-1050 UMLS/C0205436 denotes ondary an
T9378 358-365 UP/P00764 denotes ypsin f
T9379 763-767 UMLS/C0205451 denotes e wa
T9380 52-57 UMLS/C0205449 denotes ree t
T9381 212-217 UMLS/C0205449 denotes ree w
T9382 465-470 UMLS/C0205449 denotes ree w
T9383 888-893 UMLS/C0205449 denotes ee ti
T9384 911-916 UMLS/C0205449 denotes ee ti
T9385 623-628 UMLS/C1550100 denotes rum (
T9386 963-971 UMLS/C1707903 denotes edded in
T9387 644-654 UMLS/C1980044 denotes cubation w
T9388 1169-1174 UMLS/C1706315 denotes er sc
T9389 123-127 UMLS/C1704379 denotes ep b
T9390 131-135 UMLS/C1704379 denotes ep w
T9391 24-32 UMLS/C1522472 denotes ctions w
T9392 1003-1011 UMLS/C1522472 denotes tions we
T9393 1063-1071 UMLS/C1522472 denotes tions ob
T9394 38-43 UMLS/C1279901 denotes rst t
T9395 87-93 UMLS/C0849355 denotes move p
T9398 841-850 UMLS/C1522484 denotes ondary an
T9399 1041-1050 UMLS/C1522484 denotes ondary an
T9402 664-671 UMLS/C0439631 denotes imary a
T9403 994-1001 UMLS/C0243148 denotes trol, s
T9404 569-572 UMLS/C0487992 denotes A,
T9405 611-617 UMLS/C0439166 denotes rmal g
T9408 841-850 UMLS/C0175668 denotes ondary an
T9409 1041-1050 UMLS/C0175668 denotes ondary an
T9411 58-63 UMLS/C1704250 denotes mes f
T9412 894-899 UMLS/C1704250 denotes es in
T9413 917-922 UMLS/C1704250 denotes es in
T9414 24-32 UMLS/C0700320 denotes ctions w
T9415 1003-1011 UMLS/C0700320 denotes tions we
T9416 1063-1071 UMLS/C0700320 denotes tions ob
T9418 1089-1099 UMLS/C1412427 denotes exin A7 kn
T9419 123-127 UMLS/C1261552 denotes ep b
T9420 131-135 UMLS/C1261552 denotes ep w
T9421 94-102 UMLS/C0497805 denotes raffin a
T9422 501-514 UMLS/C0005456 denotes nding sites w
T9425 664-671 UMLS/C0205225 denotes imary a
T9429 618-622 UMLS/C0018019 denotes at s
T9431 1089-1099 UP/Q4R5L5 denotes exin A7 kn
T9433 1089-1099 UP/P20073 denotes exin A7 kn
T9434 152-166 UMLS/C0086045 denotes ncentrations o
T9435 191-199 UMLS/C0038128 denotes aining [
T9436 611-617 UMLS/C2347086 denotes rmal g
T9437 230-233 UMLS/C1720830 denotes S (
T9438 338-341 UMLS/C1720830 denotes S c
T9439 483-486 UMLS/C1720830 denotes S,
T9440 599-602 UMLS/C1720830 denotes S)
T9441 926-929 UMLS/C1720830 denotes , 5
T9446 618-622 UMLS/C1265549 denotes at s
T9447 342-352 UMLS/C1549781 denotes ntaining 0
T9450 44-51 UMLS/C0332293 denotes eated t
T9453 141-151 UMLS/C1272755 denotes scending c
T9454 342-352 UMLS/C2700400 denotes ntaining 0
T9455 400-404 UMLS/C0332296 denotes ee f
T9457 994-1001 UMLS/C0332298 denotes trol, s
T9458 70-73 UMLS/C0439232 denotes n i
T9459 788-791 UMLS/C0439232 denotes ea
T9460 933-936 UMLS/C0439232 denotes ea
T9463 569-572 UP/P02769 denotes A,
T9464 582-586 UMLS/C2349190 denotes sh g
T9467 623-628 UMLS/C1151254 denotes rum (
T9468 342-352 UMLS/C0332256 denotes ntaining 0
T9469 206-211 UMLS/C0231290 denotes ter t
T9470 448-453 UMLS/C0231290 denotes ter a
T9471 757-762 UMLS/C0231290 denotes er fi
T9472 1131-1138 UMLS/C0870078 denotes ples we
T9473 44-51 UMLS/C1522326 denotes eated t
T9474 611-617 UMLS/C0205307 denotes rmal g
T9480 182-190 UMLS/C0003241 denotes tibody s
T9481 672-682 UMLS/C0003241 denotes tibodies w
T9482 851-859 UMLS/C0003241 denotes ibody at
T9483 1051-1059 UMLS/C0003241 denotes ibody or
T9484 24-32 UMLS/C1551341 denotes ctions w
T9485 1003-1011 UMLS/C1551341 denotes tions we
T9486 1063-1071 UMLS/C1551341 denotes tions ob
T9487 546-552 UMLS/C0332246 denotes ides w
T9488 802-808 UMLS/C0332246 denotes des we
T9489 1131-1138 UMLS/C2347026 denotes ples we
T9490 730-742 UMLS/C2348609 denotes plemented wi
T9491 430-438 UMLS/C0003316 denotes itopes [
T9492 994-1001 UMLS/C2587213 denotes trol, s
T9495 358-365 UP/Q59149 denotes ypsin f
T9496 582-586 UMLS/C1696695 denotes sh g
T9497 1027-1031 UMLS/C1720467 denotes y wi

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T9527 75-81 CHEBI:27338 denotes xylene
T9528 168-175 CHEBI:16236 denotes ethanol
T9529 180-188 GO:0042571 denotes antibody
T9530 240-244 CHEBI:26710 denotes NaCl
T9531 253-256 CHEBI:32588 denotes KCl
T9532 265-272 CHEBI:34683 denotes Na2HPO4
T9533 281-287 CHEBI:63036 denotes KH2PO4
T9534 302-308 UBERON:0000479 denotes tissue
T9535 356-363 PR:000027795 denotes trypsin
T9536 403-415 CHEBI:16842 denotes formaldehyde
T9537 499-512 SO:0000409 denotes binding sites
T9538 585-593 CHEBI:5291 denotes gelatine
T9539 616-620 NCBITaxon:9925 denotes goat
T9540 621-626 UBERON:0001977 denotes serum
T9541 670-680 GO:0042571 denotes antibodies
T9542 848-856 GO:0042571 denotes antibody
T9543 950-955 CHEBI:15377 denotes water
T9544 1048-1056 GO:0042571 denotes antibody
T9545 1086-1096 PR:000004080 denotes annexin A7
T9546 1106-1111 NCBITaxon:10088 denotes mouse