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PMC:1084331 / 45028-45604 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T14469 0-2 FW denotes In
T14470 3-8 FW denotes vitro
T14471 9-17 NNS denotes cultures
T14472 18-20 IN denotes of
T14473 21-24 NN denotes DRG
T14474 24-436 sentence denotes Individual lumbar DRG were dissected from E13.5 or E14.5 embryos and placed on Matrigel (BD Biosciences, San Jose, California, United States) coated coverslips in DMEM/F12 (Gibco, San Diego, California, United States), 2 mM L-Gln (Gibco), N2 (Gibco), and 1 mg/ml BSA (Sigma, St. Louis, Missouri, United States) without neurotrophins, or supplemented with either NGF (100 ng/ml, Gibco) or NT-3 (20 ng/ml, Sigma).
T14475 25-35 JJ denotes Individual
T14476 43-46 NN denotes DRG
T14477 36-42 NN denotes lumbar
T14478 52-61 VBN denotes dissected
T14479 47-51 VBD denotes were
T14480 62-66 IN denotes from
T14481 67-72 NN denotes E13.5
T14482 82-89 NNS denotes embryos
T14483 73-75 CC denotes or
T14484 76-81 NN denotes E14.5
T14485 90-93 CC denotes and
T14486 94-100 VBN denotes placed
T14487 101-103 IN denotes on
T14488 104-112 NNP denotes Matrigel
T14489 167-173 VBN denotes coated
T14490 113-114 -LRB- denotes (
T14491 117-128 NNP denotes Biosciences
T14492 114-116 NNP denotes BD
T14493 128-130 , denotes ,
T14494 130-133 NNP denotes San
T14495 134-138 NNP denotes Jose
T14496 138-140 , denotes ,
T14497 140-150 NNP denotes California
T14498 150-152 , denotes ,
T14499 152-158 NNP denotes United
T14500 159-165 NNP denotes States
T14501 165-166 -RRB- denotes )
T14502 174-184 NNS denotes coverslips
T14503 185-187 IN denotes in
T14504 188-192 NN denotes DMEM
T14505 193-196 NN denotes F12
T14506 192-193 HYPH denotes /
T14507 197-198 -LRB- denotes (
T14508 198-203 NNP denotes Gibco
T14509 203-205 , denotes ,
T14510 205-208 NNP denotes San
T14511 209-214 NNP denotes Diego
T14512 214-216 , denotes ,
T14513 216-226 NNP denotes California
T14514 226-228 , denotes ,
T14515 228-234 NNP denotes United
T14516 235-241 NNP denotes States
T14517 241-242 -RRB- denotes )
T14518 242-244 , denotes ,
T14519 244-245 CD denotes 2
T14520 246-248 NN denotes mM
T14521 251-254 NN denotes Gln
T14522 249-250 NN denotes L
T14523 250-251 HYPH denotes -
T14524 255-256 -LRB- denotes (
T14525 256-261 NNP denotes Gibco
T14526 261-262 -RRB- denotes )
T14527 262-264 , denotes ,
T14528 264-266 NN denotes N2
T14529 267-268 -LRB- denotes (
T14530 268-273 NNP denotes Gibco
T14531 273-274 -RRB- denotes )
T14532 274-276 , denotes ,
T14533 276-279 CC denotes and
T14534 280-281 CD denotes 1
T14535 282-284 NN denotes mg
T14536 288-291 NN denotes BSA
T14537 284-285 SYM denotes /
T14538 285-287 NN denotes ml
T14539 292-293 -LRB- denotes (
T14540 293-298 NNP denotes Sigma
T14541 298-300 , denotes ,
T14542 300-303 NNP denotes St.
T14543 304-309 NNP denotes Louis
T14544 309-311 , denotes ,
T14545 311-319 NNP denotes Missouri
T14546 319-321 , denotes ,
T14547 321-327 NNP denotes United
T14548 328-334 NNP denotes States
T14549 334-335 -RRB- denotes )
T14550 336-343 IN denotes without
T14551 344-357 NNS denotes neurotrophins
T14552 357-359 , denotes ,
T14553 359-361 CC denotes or
T14554 362-374 VBN denotes supplemented
T14555 375-379 IN denotes with
T14556 380-386 CC denotes either
T14557 387-390 NN denotes NGF
T14558 391-392 -LRB- denotes (
T14559 403-408 NNP denotes Gibco
T14560 392-395 CD denotes 100
T14561 396-398 NN denotes ng
T14562 398-399 SYM denotes /
T14563 399-401 NN denotes ml
T14564 401-403 , denotes ,
T14565 408-409 -RRB- denotes )
T14566 410-412 CC denotes or
T14567 413-415 NN denotes NT
T14568 415-416 HYPH denotes -
T14569 416-417 CD denotes 3
T14570 418-419 -LRB- denotes (
T14571 429-434 NNP denotes Sigma
T14572 419-421 CD denotes 20
T14573 422-424 NN denotes ng
T14574 424-425 SYM denotes /
T14575 425-427 NN denotes ml
T14576 427-429 , denotes ,
T14577 434-435 -RRB- denotes )
T14578 435-436 . denotes .
T14579 436-576 sentence denotes DRG explants (n ≥ 20 for each condition) were cultured for 48 h, processed for immunocytochemistry, and analyzed using confocal microscopy.
T14580 437-440 NN denotes DRG
T14581 441-449 NNS denotes explants
T14582 483-491 VBN denotes cultured
T14583 450-451 -LRB- denotes (
T14584 455-457 CD denotes 20
T14585 451-452 NN denotes n
T14586 453-454 SYM denotes
T14587 458-461 IN denotes for
T14588 462-466 DT denotes each
T14589 467-476 NN denotes condition
T14590 476-477 -RRB- denotes )
T14591 478-482 VBD denotes were
T14592 492-495 IN denotes for
T14593 496-498 CD denotes 48
T14594 499-500 NN denotes h
T14595 500-502 , denotes ,
T14596 502-511 VBN denotes processed
T14597 512-515 IN denotes for
T14598 516-535 NN denotes immunocytochemistry
T14599 535-537 , denotes ,
T14600 537-540 CC denotes and
T14601 541-549 VBN denotes analyzed
T14602 550-555 VBG denotes using
T14603 556-564 JJ denotes confocal
T14604 565-575 NN denotes microscopy
T14605 575-576 . denotes .
R6444 T14469 T14470 advmod In,vitro
R6445 T14470 T14471 amod vitro,cultures
R6446 T14472 T14471 prep of,cultures
R6447 T14473 T14472 pobj DRG,of
R6448 T14475 T14476 amod Individual,DRG
R6449 T14476 T14478 nsubjpass DRG,dissected
R6450 T14477 T14476 compound lumbar,DRG
R6451 T14479 T14478 auxpass were,dissected
R6452 T14480 T14478 prep from,dissected
R6453 T14481 T14482 nmod E13.5,embryos
R6454 T14482 T14480 pobj embryos,from
R6455 T14483 T14481 cc or,E13.5
R6456 T14484 T14481 conj E14.5,E13.5
R6457 T14485 T14478 cc and,dissected
R6458 T14486 T14478 conj placed,dissected
R6459 T14487 T14486 prep on,placed
R6460 T14488 T14489 npadvmod Matrigel,coated
R6461 T14489 T14502 amod coated,coverslips
R6462 T14490 T14491 punct (,Biosciences
R6463 T14491 T14488 parataxis Biosciences,Matrigel
R6464 T14492 T14491 compound BD,Biosciences
R6465 T14493 T14491 punct ", ",Biosciences
R6466 T14494 T14495 compound San,Jose
R6467 T14495 T14491 npadvmod Jose,Biosciences
R6468 T14496 T14491 punct ", ",Biosciences
R6469 T14497 T14491 npadvmod California,Biosciences
R6470 T14498 T14491 punct ", ",Biosciences
R6471 T14499 T14500 compound United,States
R6472 T14500 T14491 npadvmod States,Biosciences
R6473 T14501 T14491 punct ),Biosciences
R6474 T14502 T14487 pobj coverslips,on
R6475 T14503 T14502 prep in,coverslips
R6476 T14504 T14505 compound DMEM,F12
R6477 T14505 T14503 pobj F12,in
R6478 T14506 T14505 punct /,F12
R6479 T14507 T14508 punct (,Gibco
R6480 T14508 T14505 parataxis Gibco,F12
R6481 T14509 T14508 punct ", ",Gibco
R6482 T14510 T14511 compound San,Diego
R6483 T14511 T14508 npadvmod Diego,Gibco
R6484 T14512 T14508 punct ", ",Gibco
R6485 T14513 T14508 npadvmod California,Gibco
R6486 T14514 T14508 punct ", ",Gibco
R6487 T14515 T14516 compound United,States
R6488 T14516 T14508 npadvmod States,Gibco
R6489 T14517 T14508 punct ),Gibco
R6490 T14518 T14502 punct ", ",coverslips
R6491 T14519 T14520 nummod 2,mM
R6492 T14520 T14521 compound mM,Gln
R6493 T14521 T14502 conj Gln,coverslips
R6494 T14522 T14521 compound L,Gln
R6495 T14523 T14521 punct -,Gln
R6496 T14524 T14525 punct (,Gibco
R6497 T14525 T14521 parataxis Gibco,Gln
R6498 T14526 T14525 punct ),Gibco
R6499 T14527 T14521 punct ", ",Gln
R6500 T14528 T14521 conj N2,Gln
R6501 T14529 T14530 punct (,Gibco
R6502 T14530 T14528 parataxis Gibco,N2
R6503 T14531 T14530 punct ),Gibco
R6504 T14532 T14528 punct ", ",N2
R6505 T14533 T14528 cc and,N2
R6506 T14534 T14535 nummod 1,mg
R6507 T14535 T14536 nmod mg,BSA
R6508 T14536 T14528 conj BSA,N2
R6509 T14537 T14538 punct /,ml
R6510 T14538 T14535 prep ml,mg
R6511 T14539 T14540 punct (,Sigma
R6512 T14540 T14536 parataxis Sigma,BSA
R6513 T14541 T14540 punct ", ",Sigma
R6514 T14542 T14543 compound St.,Louis
R6515 T14543 T14540 npadvmod Louis,Sigma
R6516 T14544 T14540 punct ", ",Sigma
R6517 T14545 T14540 npadvmod Missouri,Sigma
R6518 T14546 T14540 punct ", ",Sigma
R6519 T14547 T14548 compound United,States
R6520 T14548 T14540 npadvmod States,Sigma
R6521 T14549 T14540 punct ),Sigma
R6522 T14550 T14536 prep without,BSA
R6523 T14551 T14550 pobj neurotrophins,without
R6524 T14552 T14478 punct ", ",dissected
R6525 T14553 T14478 cc or,dissected
R6526 T14554 T14478 conj supplemented,dissected
R6527 T14555 T14554 prep with,supplemented
R6528 T14556 T14557 preconj either,NGF
R6529 T14557 T14555 pobj NGF,with
R6530 T14558 T14559 punct (,Gibco
R6531 T14559 T14557 parataxis Gibco,NGF
R6532 T14560 T14561 nummod 100,ng
R6533 T14561 T14559 dep ng,Gibco
R6534 T14562 T14563 punct /,ml
R6535 T14563 T14561 prep ml,ng
R6536 T14564 T14559 punct ", ",Gibco
R6537 T14565 T14559 punct ),Gibco
R6538 T14566 T14557 cc or,NGF
R6539 T14567 T14557 conj NT,NGF
R6540 T14568 T14567 punct -,NT
R6541 T14569 T14567 nummod 3,NT
R6542 T14570 T14571 punct (,Sigma
R6543 T14571 T14567 parataxis Sigma,NT
R6544 T14572 T14573 nummod 20,ng
R6545 T14573 T14571 dep ng,Sigma
R6546 T14574 T14575 punct /,ml
R6547 T14575 T14573 prep ml,ng
R6548 T14576 T14571 punct ", ",Sigma
R6549 T14577 T14571 punct ),Sigma
R6550 T14578 T14478 punct .,dissected
R6551 T14580 T14581 compound DRG,explants
R6552 T14581 T14582 nsubjpass explants,cultured
R6553 T14583 T14584 punct (,20
R6554 T14584 T14581 parataxis 20,explants
R6555 T14585 T14584 nsubj n,20
R6556 T14586 T14584 punct ≥,20
R6557 T14587 T14584 prep for,20
R6558 T14588 T14589 det each,condition
R6559 T14589 T14587 pobj condition,for
R6560 T14590 T14584 punct ),20
R6561 T14591 T14582 auxpass were,cultured
R6562 T14592 T14582 prep for,cultured
R6563 T14593 T14594 nummod 48,h
R6564 T14594 T14592 pobj h,for
R6565 T14595 T14582 punct ", ",cultured
R6566 T14596 T14582 conj processed,cultured
R6567 T14597 T14596 prep for,processed
R6568 T14598 T14597 pobj immunocytochemistry,for
R6569 T14599 T14596 punct ", ",processed
R6570 T14600 T14596 cc and,processed
R6571 T14601 T14596 conj analyzed,processed
R6572 T14602 T14601 advcl using,analyzed
R6573 T14603 T14604 amod confocal,microscopy
R6574 T14604 T14602 dobj microscopy,using
R6575 T14605 T14582 punct .,cultured

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T14460 21-24 UBERON:0000044 denotes DRG
T14461 36-46 UBERON:0002836 denotes lumbar DRG
T14462 82-89 UBERON:0000922 denotes embryos
T14463 249-254 CHEBI_EXT:L_glutamine denotes L-Gln
T14464 251-254 CHEBI_SO_EXT:glutamine denotes Gln
T14465 344-357 PR_EXT:000021998 denotes neurotrophins
T14466 387-390 PR_EXT:000011194 denotes NGF
T14467 413-417 PR_EXT:000011459 denotes NT-3
T14468 437-440 UBERON:0000044 denotes DRG

biosemtest

Id Subject Object Predicate Lexical cue
T14371 504-513 UMLS/C1709694 denotes ocessed f
T14372 469-478 UMLS/C0348080 denotes ndition)
T14373 504-513 UMLS/C1551390 denotes ocessed f
T14374 167-173 UMLS/C1552080 denotes coated
T14375 288-291 UMLS/C1511233 denotes BSA
T14376 288-291 UMLS/C0487992 denotes BSA
T14377 362-374 UMLS/C1549514 denotes supplemented
T14378 518-537 UMLS/C0242349 denotes munocytochemistry,
T14379 130-133 UMLS/C1826357 denotes San
T14380 205-208 UMLS/C1826357 denotes San
T14381 387-390 UMLS/C1417719 denotes NGF
T14382 9-17 UMLS/C0430400 denotes cultures
T14383 485-493 UMLS/C0430400 denotes ltured f
T14384 469-478 UMLS/C1705253 denotes ndition)
T14385 82-89 UMLS/C0013935 denotes embryos
T14386 469-478 UMLS/C0009647 denotes ndition)
T14387 167-173 UMLS/C0999543 denotes coated
T14388 288-291 UMLS/C0036774 denotes BSA
T14389 94-100 UMLS/C1882509 denotes placed
T14390 167-173 UMLS/C1705944 denotes coated
T14391 9-17 UMLS/C2242979 denotes cultures
T14392 485-493 UMLS/C2242979 denotes ltured f
T14393 167-173 UMLS/C1697272 denotes coated
T14394 387-390 UMLS/C0027752 denotes NGF
T14395 543-551 UMLS/C0936012 denotes alyzed u
T14396 344-357 UMLS/C0027754 denotes neurotrophins
T14397 387-390 UMLS/C0027754 denotes NGF
T14398 167-173 UMLS/C0325028 denotes coated
T14399 193-196 UMLS/C0015525 denotes F12
T14400 362-374 UMLS/C0242295 denotes supplemented
T14401 21-24 UMLS/C1414151 denotes DRG
T14402 43-46 UMLS/C1414151 denotes DRG
T14403 437-440 UMLS/C1414151 denotes DRG
T14404 167-173 UMLS/C1704806 denotes coated
T14405 344-357 UMLS/C1332408 denotes neurotrophins
T14406 52-61 UMLS/C0205239 denotes dissected
T14407 504-513 UMLS/C1522240 denotes ocessed f
T14408 167-173 UMLS/C1522408 denotes coated
T14409 311-319 UMLS/C0026222 denotes Missouri
T14410 21-24 UMLS/C1537672 denotes DRG
T14411 43-46 UMLS/C1537672 denotes DRG
T14412 437-440 UMLS/C1537672 denotes DRG
T14413 140-150 UMLS/C0324542 denotes California
T14414 216-226 UMLS/C0324542 denotes California
T14415 293-298 UMLS/C0227391 denotes Sigma
T14416 429-434 UMLS/C0227391 denotes Sigma
T14417 288-291 UMLS/C0005902 denotes BSA
T14418 504-513 UMLS/C1550044 denotes ocessed f
T14419 344-357 UMLS/C0132298 denotes neurotrophins
T14420 264-266 UMLS/C0441960 denotes N2
T14421 140-150 UMLS/C0006754 denotes California
T14422 216-226 UMLS/C0006754 denotes California
T14423 167-173 UMLS/C0453946 denotes coated
T14424 36-42 UMLS/C0024090 denotes lumbar
T14425 288-291 UP/P02769 denotes BSA
T14426 9-17 UMLS/C0010453 denotes cultures
T14427 485-493 UMLS/C0010453 denotes ltured f
T14428 104-112 UMLS/C0065749 denotes Matrigel
T14429 94-100 UMLS/C1704765 denotes placed
T14430 82-89 UMLS/C1305370 denotes embryos
T14431 3-8 UMLS/C0021135 denotes vitro
T14432 152-165 UMLS/C0041703 denotes United States
T14433 228-241 UMLS/C0041703 denotes United States
T14434 321-334 UMLS/C0041703 denotes United States
T14435 3-8 UMLS/C1533691 denotes vitro
T14436 25-35 UMLS/C1550471 denotes Individual
T14437 362-374 UMLS/C1947943 denotes supplemented
T14438 504-513 UMLS/C1184743 denotes ocessed f
T14439 396-401 UMLS/C0439275 denotes ng/ml
T14440 422-427 UMLS/C0439275 denotes ng/ml
T14441 9-17 UMLS/C0220814 denotes cultures
T14442 485-493 UMLS/C0220814 denotes ltured f
T14443 130-133 UMLS/C1424214 denotes San
T14444 205-208 UMLS/C1424214 denotes San
T14445 362-374 UMLS/C2348609 denotes supplemented
T14446 193-196 UMLS/C1414499 denotes F12
T14447 344-357 UMLS/C1323315 denotes neurotrophins
T14448 21-24 UMLS/C0011928 denotes DRG
T14449 43-46 UMLS/C0011928 denotes DRG
T14450 437-440 UMLS/C0011928 denotes DRG
T14451 293-298 UMLS/C1719918 denotes Sigma
T14452 429-434 UMLS/C1719918 denotes Sigma

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T14453 21-24 UBERON:0000044 denotes DRG
T14454 36-46 UBERON:0002836 denotes lumbar DRG
T14455 82-89 UBERON:0000922 denotes embryos
T14456 344-357 PR:000021998 denotes neurotrophins
T14457 387-390 PR:000011194 denotes NGF
T14458 413-417 PR:000011459 denotes NT-3
T14459 437-440 UBERON:0000044 denotes DRG