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PMC:1084331 / 41549-42708 JSONTXT

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Id Subject Object Predicate Lexical cue
T13103 0-3 DT denotes The
T13104 14-22 NNS denotes plasmids
T13105 4-13 VBG denotes following
T13106 28-32 VBN denotes used
T13107 23-27 VBD denotes were
T13108 33-36 IN denotes for
T13109 37-52 JJ denotes transcriptional
T13110 69-75 NNS denotes assays
T13111 53-68 NN denotes transactivation
T13112 75-77 : denotes :
T13113 77-80 NN denotes pRc
T13114 81-84 NN denotes RSV
T13115 80-81 HYPH denotes /
T13116 85-86 -LRB- denotes (
T13117 86-96 NNP denotes Invitrogen
T13118 96-98 , denotes ,
T13119 98-106 NNP denotes Carlsbad
T13120 106-108 , denotes ,
T13121 108-118 NNP denotes California
T13122 118-120 , denotes ,
T13123 120-126 NNP denotes United
T13124 127-133 NNP denotes States
T13125 133-134 -RRB- denotes )
T13126 134-136 , denotes ,
T13127 136-139 NN denotes pRc
T13128 140-143 NN denotes RSV
T13129 139-140 HYPH denotes /
T13130 144-148 NN denotes Er81
T13131 143-144 HYPH denotes -
T13132 148-150 , denotes ,
T13133 150-153 NN denotes pRc
T13134 154-157 NN denotes RSV
T13135 153-154 HYPH denotes /
T13136 162-166 NN denotes Pea3
T13137 157-158 HYPH denotes -
T13138 158-161 NN denotes EWS
T13139 161-162 HYPH denotes -
T13140 166-168 , denotes ,
T13141 168-171 NN denotes pTP
T13142 172-177 NN denotes 5xETS
T13143 171-172 HYPH denotes -
T13144 177-179 , denotes ,
T13145 179-182 CC denotes and
T13146 183-186 NN denotes pTP
T13147 187-195 NN denotes 5xETSmut
T13148 186-187 HYPH denotes -
T13149 195-196 . denotes .
T13150 196-331 sentence denotes pRc/RSV-Er81 and pRc/RSV-EWS-Pea3 were obtained by insertion of the cDNAs for Er81 or EWS-Pea3 (gift from J. A. Hassell) into pRc/RSV.
T13151 197-200 NN denotes pRc
T13152 201-204 NN denotes RSV
T13153 200-201 HYPH denotes /
T13154 205-209 NN denotes Er81
T13155 204-205 HYPH denotes -
T13156 236-244 VBN denotes obtained
T13157 210-213 CC denotes and
T13158 214-217 NN denotes pRc
T13159 218-221 NN denotes RSV
T13160 217-218 HYPH denotes /
T13161 226-230 NN denotes Pea3
T13162 221-222 HYPH denotes -
T13163 222-225 NN denotes EWS
T13164 225-226 HYPH denotes -
T13165 231-235 VBD denotes were
T13166 245-247 IN denotes by
T13167 248-257 NN denotes insertion
T13168 258-260 IN denotes of
T13169 261-264 DT denotes the
T13170 265-270 NNS denotes cDNAs
T13171 271-274 IN denotes for
T13172 275-279 NN denotes Er81
T13173 280-282 CC denotes or
T13174 283-286 NN denotes EWS
T13175 287-291 NN denotes Pea3
T13176 286-287 HYPH denotes -
T13177 292-293 -LRB- denotes (
T13178 293-297 NN denotes gift
T13179 298-302 IN denotes from
T13180 303-305 NNP denotes J.
T13181 309-316 NNP denotes Hassell
T13182 306-308 NNP denotes A.
T13183 316-317 -RRB- denotes )
T13184 318-322 IN denotes into
T13185 323-326 NN denotes pRc
T13186 327-330 NN denotes RSV
T13187 326-327 HYPH denotes /
T13188 330-331 . denotes .
T13189 331-506 sentence denotes pTP-5xETS was constructed by inserting a cassette of five repetitive copies of high-affinity Pea3 binding sites (5′- GCCGGAAGC-3′) [18,19] into a modified version of pTK-Luc.
T13190 332-335 NN denotes pTP
T13191 336-341 NN denotes 5xETS
T13192 335-336 HYPH denotes -
T13193 346-357 VBN denotes constructed
T13194 342-345 VBD denotes was
T13195 358-360 IN denotes by
T13196 361-370 VBG denotes inserting
T13197 371-372 DT denotes a
T13198 373-381 NN denotes cassette
T13199 382-384 IN denotes of
T13200 385-389 CD denotes five
T13201 401-407 NNS denotes copies
T13202 390-400 JJ denotes repetitive
T13203 408-410 IN denotes of
T13204 411-415 JJ denotes high
T13205 416-424 NN denotes affinity
T13206 415-416 HYPH denotes -
T13207 438-443 NNS denotes sites
T13208 425-429 NN denotes Pea3
T13209 430-437 NN denotes binding
T13210 444-445 -LRB- denotes (
T13211 459-460 CD denotes 3
T13212 445-446 CD denotes 5
T13213 446-447 SYM denotes ′
T13214 447-448 HYPH denotes -
T13215 449-458 NN denotes GCCGGAAGC
T13216 458-459 HYPH denotes -
T13217 460-461 SYM denotes ′
T13218 461-462 -RRB- denotes )
T13219 463-464 -LRB- denotes [
T13220 467-469 CD denotes 19
T13221 464-466 CD denotes 18
T13222 466-467 , denotes ,
T13223 469-470 -RRB- denotes ]
T13224 471-475 IN denotes into
T13225 476-477 DT denotes a
T13226 487-494 NN denotes version
T13227 478-486 VBN denotes modified
T13228 495-497 IN denotes of
T13229 498-501 NN denotes pTK
T13230 502-505 NN denotes Luc
T13231 501-502 HYPH denotes -
T13232 505-506 . denotes .
T13233 506-623 sentence denotes pTP-5xETSmut was generated as pTP-5xETS but using a mutated complement of the Pea3 binding sites (5′- GCCTATGGC-3′).
T13234 507-510 NN denotes pTP
T13235 511-519 NN denotes 5xETSmut
T13236 510-511 HYPH denotes -
T13237 524-533 VBN denotes generated
T13238 520-523 VBD denotes was
T13239 534-536 IN denotes as
T13240 537-540 NN denotes pTP
T13241 541-546 NN denotes 5xETS
T13242 540-541 HYPH denotes -
T13243 547-550 CC denotes but
T13244 551-556 VBG denotes using
T13245 557-558 DT denotes a
T13246 567-577 NN denotes complement
T13247 559-566 VBN denotes mutated
T13248 578-580 IN denotes of
T13249 581-584 DT denotes the
T13250 598-603 NNS denotes sites
T13251 585-589 NN denotes Pea3
T13252 590-597 NN denotes binding
T13253 604-605 -LRB- denotes (
T13254 619-620 CD denotes 3
T13255 605-606 CD denotes 5
T13256 606-607 SYM denotes ′
T13257 607-608 HYPH denotes -
T13258 609-618 NN denotes GCCTATGGC
T13259 618-619 HYPH denotes -
T13260 620-621 SYM denotes ′
T13261 621-622 -RRB- denotes )
T13262 622-623 . denotes .
T13263 623-732 sentence denotes A control plasmid to normalize for transfection efficiency (placZ) and pTK-Luc were a gift from D. Kressler.
T13264 624-625 DT denotes A
T13265 634-641 NN denotes plasmid
T13266 626-633 NN denotes control
T13267 703-707 VBD denotes were
T13268 642-644 TO denotes to
T13269 645-654 VB denotes normalize
T13270 655-658 IN denotes for
T13271 659-671 NN denotes transfection
T13272 672-682 NN denotes efficiency
T13273 683-684 -LRB- denotes (
T13274 684-689 NN denotes placZ
T13275 689-690 -RRB- denotes )
T13276 691-694 CC denotes and
T13277 695-698 NN denotes pTK
T13278 699-702 NN denotes Luc
T13279 698-699 HYPH denotes -
T13280 708-709 DT denotes a
T13281 710-714 NN denotes gift
T13282 715-719 IN denotes from
T13283 720-722 NNP denotes D.
T13284 723-731 NNP denotes Kressler
T13285 731-732 . denotes .
T13286 732-947 sentence denotes COS-7 cells were co-transfected with 1–1.2 μg of total DNA including one of the effector plasmids pRc/RSV-empty, pRc/RSV-Er81, or pRc/RSV-EWS-Pea3; one of the reporter plasmids pTP-5xETS or pTP-5xETSmut; and placZ.
T13287 733-736 NN denotes COS
T13288 739-744 NNS denotes cells
T13289 736-737 HYPH denotes -
T13290 737-738 CD denotes 7
T13291 750-764 VBN denotes co-transfected
T13292 745-749 VBD denotes were
T13293 765-769 IN denotes with
T13294 770-771 CD denotes 1
T13295 772-775 CD denotes 1.2
T13296 771-772 SYM denotes –
T13297 776-778 NN denotes μg
T13298 779-781 IN denotes of
T13299 782-787 JJ denotes total
T13300 788-791 NN denotes DNA
T13301 792-801 VBG denotes including
T13302 802-805 CD denotes one
T13303 806-808 IN denotes of
T13304 809-812 DT denotes the
T13305 822-830 NNS denotes plasmids
T13306 813-821 NN denotes effector
T13307 831-834 NN denotes pRc
T13308 835-838 NN denotes RSV
T13309 834-835 HYPH denotes /
T13310 838-839 HYPH denotes -
T13311 839-844 JJ denotes empty
T13312 844-846 , denotes ,
T13313 846-849 NN denotes pRc
T13314 850-853 NN denotes RSV
T13315 849-850 HYPH denotes /
T13316 854-858 NN denotes Er81
T13317 853-854 HYPH denotes -
T13318 858-860 , denotes ,
T13319 860-862 CC denotes or
T13320 863-866 NN denotes pRc
T13321 867-870 NN denotes RSV
T13322 866-867 HYPH denotes /
T13323 875-879 NN denotes Pea3
T13324 870-871 HYPH denotes -
T13325 871-874 NN denotes EWS
T13326 874-875 HYPH denotes -
T13327 879-880 : denotes ;
T13328 881-884 CD denotes one
T13329 885-887 IN denotes of
T13330 888-891 DT denotes the
T13331 901-909 NNS denotes plasmids
T13332 892-900 NN denotes reporter
T13333 910-913 NN denotes pTP
T13334 914-919 NN denotes 5xETS
T13335 913-914 HYPH denotes -
T13336 920-922 CC denotes or
T13337 923-926 NN denotes pTP
T13338 927-935 NN denotes 5xETSmut
T13339 926-927 HYPH denotes -
T13340 935-936 : denotes ;
T13341 937-940 CC denotes and
T13342 941-946 NN denotes placZ
T13343 946-947 . denotes .
T13344 947-1076 sentence denotes Cells were harvested after 25 h and processed for assays to determine luciferase and LacZ activity as described previously [44].
T13345 948-953 NNS denotes Cells
T13346 959-968 VBN denotes harvested
T13347 954-958 VBD denotes were
T13348 969-974 IN denotes after
T13349 975-977 CD denotes 25
T13350 978-979 NN denotes h
T13351 980-983 CC denotes and
T13352 984-993 VBN denotes processed
T13353 994-997 IN denotes for
T13354 998-1004 NNS denotes assays
T13355 1005-1007 TO denotes to
T13356 1008-1017 VB denotes determine
T13357 1018-1028 NN denotes luciferase
T13358 1038-1046 NN denotes activity
T13359 1029-1032 CC denotes and
T13360 1033-1037 NN denotes LacZ
T13361 1047-1049 IN denotes as
T13362 1050-1059 VBN denotes described
T13363 1060-1070 RB denotes previously
T13364 1071-1072 -LRB- denotes [
T13365 1072-1074 CD denotes 44
T13366 1074-1075 -RRB- denotes ]
T13367 1075-1076 . denotes .
T13368 1076-1159 sentence denotes Luciferase values normalized to LacZ activity are referred to as luciferase units.
T13369 1077-1087 NN denotes Luciferase
T13370 1088-1094 NNS denotes values
T13371 1127-1135 VBN denotes referred
T13372 1095-1105 VBN denotes normalized
T13373 1106-1108 IN denotes to
T13374 1109-1113 NN denotes LacZ
T13375 1114-1122 NN denotes activity
T13376 1123-1126 VBP denotes are
T13377 1136-1138 IN denotes to
T13378 1139-1141 IN denotes as
T13379 1142-1152 NN denotes luciferase
T13380 1153-1158 NNS denotes units
T13381 1158-1159 . denotes .
R5743 T13103 T13104 det The,plasmids
R5744 T13104 T13106 nsubjpass plasmids,used
R5745 T13105 T13104 amod following,plasmids
R5746 T13107 T13106 auxpass were,used
R5747 T13108 T13106 prep for,used
R5748 T13109 T13110 amod transcriptional,assays
R5749 T13110 T13108 pobj assays,for
R5750 T13111 T13110 compound transactivation,assays
R5751 T13112 T13106 punct : ,used
R5752 T13113 T13114 compound pRc,RSV
R5753 T13114 T13106 dobj RSV,used
R5754 T13115 T13114 punct /,RSV
R5755 T13116 T13117 punct (,Invitrogen
R5756 T13117 T13114 parataxis Invitrogen,RSV
R5757 T13118 T13117 punct ", ",Invitrogen
R5758 T13119 T13117 npadvmod Carlsbad,Invitrogen
R5759 T13120 T13117 punct ", ",Invitrogen
R5760 T13121 T13117 npadvmod California,Invitrogen
R5761 T13122 T13117 punct ", ",Invitrogen
R5762 T13123 T13124 compound United,States
R5763 T13124 T13117 npadvmod States,Invitrogen
R5764 T13125 T13117 punct ),Invitrogen
R5765 T13126 T13114 punct ", ",RSV
R5766 T13127 T13128 compound pRc,RSV
R5767 T13128 T13130 compound RSV,Er81
R5768 T13129 T13128 punct /,RSV
R5769 T13130 T13114 conj Er81,RSV
R5770 T13131 T13130 punct -,Er81
R5771 T13132 T13130 punct ", ",Er81
R5772 T13133 T13134 compound pRc,RSV
R5773 T13134 T13136 compound RSV,Pea3
R5774 T13135 T13134 punct /,RSV
R5775 T13136 T13130 conj Pea3,Er81
R5776 T13137 T13136 punct -,Pea3
R5777 T13138 T13136 compound EWS,Pea3
R5778 T13139 T13136 punct -,Pea3
R5779 T13140 T13136 punct ", ",Pea3
R5780 T13141 T13142 compound pTP,5xETS
R5781 T13142 T13136 conj 5xETS,Pea3
R5782 T13143 T13142 punct -,5xETS
R5783 T13144 T13142 punct ", ",5xETS
R5784 T13145 T13142 cc and,5xETS
R5785 T13146 T13147 compound pTP,5xETSmut
R5786 T13147 T13142 conj 5xETSmut,5xETS
R5787 T13148 T13147 punct -,5xETSmut
R5788 T13149 T13106 punct .,used
R5789 T13151 T13152 compound pRc,RSV
R5790 T13152 T13154 compound RSV,Er81
R5791 T13153 T13152 punct /,RSV
R5792 T13154 T13156 nsubjpass Er81,obtained
R5793 T13155 T13154 punct -,Er81
R5794 T13157 T13154 cc and,Er81
R5795 T13158 T13159 compound pRc,RSV
R5796 T13159 T13161 compound RSV,Pea3
R5797 T13160 T13159 punct /,RSV
R5798 T13161 T13154 conj Pea3,Er81
R5799 T13162 T13161 punct -,Pea3
R5800 T13163 T13161 compound EWS,Pea3
R5801 T13164 T13161 punct -,Pea3
R5802 T13165 T13156 auxpass were,obtained
R5803 T13166 T13156 prep by,obtained
R5804 T13167 T13166 pobj insertion,by
R5805 T13168 T13167 prep of,insertion
R5806 T13169 T13170 det the,cDNAs
R5807 T13170 T13168 pobj cDNAs,of
R5808 T13171 T13170 prep for,cDNAs
R5809 T13172 T13171 pobj Er81,for
R5810 T13173 T13172 cc or,Er81
R5811 T13174 T13175 compound EWS,Pea3
R5812 T13175 T13172 conj Pea3,Er81
R5813 T13176 T13175 punct -,Pea3
R5814 T13177 T13178 punct (,gift
R5815 T13178 T13175 parataxis gift,Pea3
R5816 T13179 T13178 prep from,gift
R5817 T13180 T13181 compound J.,Hassell
R5818 T13181 T13179 pobj Hassell,from
R5819 T13182 T13181 compound A.,Hassell
R5820 T13183 T13178 punct ),gift
R5821 T13184 T13167 prep into,insertion
R5822 T13185 T13186 compound pRc,RSV
R5823 T13186 T13184 pobj RSV,into
R5824 T13187 T13186 punct /,RSV
R5825 T13188 T13156 punct .,obtained
R5826 T13190 T13191 compound pTP,5xETS
R5827 T13191 T13193 nsubjpass 5xETS,constructed
R5828 T13192 T13191 punct -,5xETS
R5829 T13194 T13193 auxpass was,constructed
R5830 T13195 T13193 prep by,constructed
R5831 T13196 T13195 pcomp inserting,by
R5832 T13197 T13198 det a,cassette
R5833 T13198 T13196 dobj cassette,inserting
R5834 T13199 T13198 prep of,cassette
R5835 T13200 T13201 nummod five,copies
R5836 T13201 T13199 pobj copies,of
R5837 T13202 T13201 amod repetitive,copies
R5838 T13203 T13201 prep of,copies
R5839 T13204 T13205 amod high,affinity
R5840 T13205 T13207 compound affinity,sites
R5841 T13206 T13205 punct -,affinity
R5842 T13207 T13203 pobj sites,of
R5843 T13208 T13207 compound Pea3,sites
R5844 T13209 T13207 compound binding,sites
R5845 T13210 T13211 punct (,3
R5846 T13211 T13207 parataxis 3,sites
R5847 T13212 T13211 dep 5,3
R5848 T13213 T13212 punct ′,5
R5849 T13214 T13211 punct -,3
R5850 T13215 T13211 dep GCCGGAAGC,3
R5851 T13216 T13211 punct -,3
R5852 T13217 T13211 punct ′,3
R5853 T13218 T13211 punct ),3
R5854 T13219 T13220 punct [,19
R5855 T13220 T13207 parataxis 19,sites
R5856 T13221 T13220 nummod 18,19
R5857 T13222 T13220 punct ",",19
R5858 T13223 T13220 punct ],19
R5859 T13224 T13196 prep into,inserting
R5860 T13225 T13226 det a,version
R5861 T13226 T13224 pobj version,into
R5862 T13227 T13226 amod modified,version
R5863 T13228 T13226 prep of,version
R5864 T13229 T13230 compound pTK,Luc
R5865 T13230 T13228 pobj Luc,of
R5866 T13231 T13230 punct -,Luc
R5867 T13232 T13193 punct .,constructed
R5868 T13234 T13235 compound pTP,5xETSmut
R5869 T13235 T13237 nsubjpass 5xETSmut,generated
R5870 T13236 T13235 punct -,5xETSmut
R5871 T13238 T13237 auxpass was,generated
R5872 T13239 T13237 prep as,generated
R5873 T13240 T13241 compound pTP,5xETS
R5874 T13241 T13239 pobj 5xETS,as
R5875 T13242 T13241 punct -,5xETS
R5876 T13243 T13239 cc but,as
R5877 T13244 T13239 conj using,as
R5878 T13245 T13246 det a,complement
R5879 T13246 T13244 dobj complement,using
R5880 T13247 T13246 amod mutated,complement
R5881 T13248 T13246 prep of,complement
R5882 T13249 T13250 det the,sites
R5883 T13250 T13248 pobj sites,of
R5884 T13251 T13250 compound Pea3,sites
R5885 T13252 T13250 compound binding,sites
R5886 T13253 T13254 punct (,3
R5887 T13254 T13246 parataxis 3,complement
R5888 T13255 T13254 dep 5,3
R5889 T13256 T13255 punct ′,5
R5890 T13257 T13254 punct -,3
R5891 T13258 T13254 dep GCCTATGGC,3
R5892 T13259 T13254 punct -,3
R5893 T13260 T13254 punct ′,3
R5894 T13261 T13254 punct ),3
R5895 T13262 T13237 punct .,generated
R5896 T13264 T13265 det A,plasmid
R5897 T13265 T13267 nsubj plasmid,were
R5898 T13266 T13265 compound control,plasmid
R5899 T13268 T13269 aux to,normalize
R5900 T13269 T13265 advcl normalize,plasmid
R5901 T13270 T13269 prep for,normalize
R5902 T13271 T13272 compound transfection,efficiency
R5903 T13272 T13270 pobj efficiency,for
R5904 T13273 T13274 punct (,placZ
R5905 T13274 T13272 parataxis placZ,efficiency
R5906 T13275 T13274 punct ),placZ
R5907 T13276 T13272 cc and,efficiency
R5908 T13277 T13278 compound pTK,Luc
R5909 T13278 T13272 conj Luc,efficiency
R5910 T13279 T13278 punct -,Luc
R5911 T13280 T13281 det a,gift
R5912 T13281 T13267 attr gift,were
R5913 T13282 T13281 prep from,gift
R5914 T13283 T13284 compound D.,Kressler
R5915 T13284 T13282 pobj Kressler,from
R5916 T13285 T13267 punct .,were
R5917 T13287 T13288 nmod COS,cells
R5918 T13288 T13291 nsubjpass cells,co-transfected
R5919 T13289 T13287 punct -,COS
R5920 T13290 T13287 nummod 7,COS
R5921 T13292 T13291 auxpass were,co-transfected
R5922 T13293 T13291 prep with,co-transfected
R5923 T13294 T13295 quantmod 1,1.2
R5924 T13295 T13297 nummod 1.2,μg
R5925 T13296 T13295 punct –,1.2
R5926 T13297 T13293 pobj μg,with
R5927 T13298 T13297 prep of,μg
R5928 T13299 T13300 amod total,DNA
R5929 T13300 T13298 pobj DNA,of
R5930 T13301 T13297 prep including,μg
R5931 T13302 T13301 pobj one,including
R5932 T13303 T13302 prep of,one
R5933 T13304 T13305 det the,plasmids
R5934 T13305 T13303 pobj plasmids,of
R5935 T13306 T13305 compound effector,plasmids
R5936 T13307 T13308 compound pRc,RSV
R5937 T13308 T13302 appos RSV,one
R5938 T13309 T13308 punct /,RSV
R5939 T13310 T13308 punct -,RSV
R5940 T13311 T13308 amod empty,RSV
R5941 T13312 T13308 punct ", ",RSV
R5942 T13313 T13314 compound pRc,RSV
R5943 T13314 T13316 compound RSV,Er81
R5944 T13315 T13314 punct /,RSV
R5945 T13316 T13308 conj Er81,RSV
R5946 T13317 T13316 punct -,Er81
R5947 T13318 T13316 punct ", ",Er81
R5948 T13319 T13316 cc or,Er81
R5949 T13320 T13321 compound pRc,RSV
R5950 T13321 T13323 compound RSV,Pea3
R5951 T13322 T13321 punct /,RSV
R5952 T13323 T13316 conj Pea3,Er81
R5953 T13324 T13323 punct -,Pea3
R5954 T13325 T13323 compound EWS,Pea3
R5955 T13326 T13323 punct -,Pea3
R5956 T13327 T13302 punct ;,one
R5957 T13328 T13302 conj one,one
R5958 T13329 T13328 prep of,one
R5959 T13330 T13331 det the,plasmids
R5960 T13331 T13329 pobj plasmids,of
R5961 T13332 T13331 compound reporter,plasmids
R5962 T13333 T13334 compound pTP,5xETS
R5963 T13334 T13328 appos 5xETS,one
R5964 T13335 T13334 punct -,5xETS
R5965 T13336 T13334 cc or,5xETS
R5966 T13337 T13338 compound pTP,5xETSmut
R5967 T13338 T13334 conj 5xETSmut,5xETS
R5968 T13339 T13338 punct -,5xETSmut
R5969 T13340 T13328 punct ;,one
R5970 T13341 T13328 cc and,one
R5971 T13342 T13328 conj placZ,one
R5972 T13343 T13291 punct .,co-transfected
R5973 T13345 T13346 nsubjpass Cells,harvested
R5974 T13347 T13346 auxpass were,harvested
R5975 T13348 T13346 prep after,harvested
R5976 T13349 T13350 nummod 25,h
R5977 T13350 T13348 pobj h,after
R5978 T13351 T13346 cc and,harvested
R5979 T13352 T13346 conj processed,harvested
R5980 T13353 T13352 prep for,processed
R5981 T13354 T13353 pobj assays,for
R5982 T13355 T13356 aux to,determine
R5983 T13356 T13352 advcl determine,processed
R5984 T13357 T13358 nmod luciferase,activity
R5985 T13358 T13356 dobj activity,determine
R5986 T13359 T13357 cc and,luciferase
R5987 T13360 T13357 conj LacZ,luciferase
R5988 T13361 T13362 mark as,described
R5989 T13362 T13356 advcl described,determine
R5990 T13363 T13362 advmod previously,described
R5991 T13364 T13365 punct [,44
R5992 T13365 T13352 parataxis 44,processed
R5993 T13366 T13365 punct ],44
R5994 T13367 T13346 punct .,harvested
R5995 T13369 T13370 compound Luciferase,values
R5996 T13370 T13371 nsubjpass values,referred
R5997 T13372 T13370 acl normalized,values
R5998 T13373 T13372 prep to,normalized
R5999 T13374 T13375 compound LacZ,activity
R6000 T13375 T13373 pobj activity,to
R6001 T13376 T13371 auxpass are,referred
R6002 T13377 T13371 prep to,referred
R6003 T13378 T13371 prep as,referred
R6004 T13379 T13380 compound luciferase,units
R6005 T13380 T13378 pobj units,as
R6006 T13381 T13371 punct .,referred

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T13048 14-22 SO_EXT:0000155 denotes plasmids
T13049 37-52 GO_EXT:transcription denotes transcriptional
T13050 81-84 NCBITaxon:11886 denotes RSV
T13051 140-143 NCBITaxon:11886 denotes RSV
T13052 144-148 PR_EXT:000007223 denotes Er81
T13053 154-157 NCBITaxon:11886 denotes RSV
T13054 158-161 PR_EXT:000007243 denotes EWS
T13055 162-166 PR_EXT:000007227 denotes Pea3
T13056 201-204 NCBITaxon:11886 denotes RSV
T13057 205-209 PR_EXT:000007223 denotes Er81
T13058 218-221 NCBITaxon:11886 denotes RSV
T13059 222-225 PR_EXT:000007243 denotes EWS
T13060 226-230 PR_EXT:000007227 denotes Pea3
T13061 248-257 SO_EXT:sequence_insertion_entity_or_process denotes insertion
T13062 265-270 SO_EXT:cDNA denotes cDNAs
T13063 275-279 PR_EXT:000007223 denotes Er81
T13064 283-286 PR_EXT:000007243 denotes EWS
T13065 287-291 PR_EXT:000007227 denotes Pea3
T13066 327-330 NCBITaxon:11886 denotes RSV
T13067 361-370 SO_EXT:sequence_insertion_process denotes inserting
T13068 373-381 SO_EXT:0005853 denotes cassette
T13069 390-400 SO_EXT:sequence_repeat_unit_or_region denotes repetitive
T13070 401-407 SO_EXT:sequence_copy_entity denotes copies
T13071 425-429 PR_EXT:000007227 denotes Pea3
T13072 430-437 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T13073 430-443 SO_EXT:0000409 denotes binding sites
T13074 478-486 SO_EXT:sequence_alteration_process denotes modified
T13075 559-566 SO_EXT:sequence_alteration_process denotes mutated
T13076 585-589 PR_EXT:000007227 denotes Pea3
T13077 590-597 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T13078 590-603 SO_EXT:0000409 denotes binding sites
T13079 634-641 SO_EXT:0000155 denotes plasmid
T13080 659-671 GO:0009294 denotes transfection
T13081 739-744 CL_GO_EXT:cell denotes cells
T13082 753-764 GO:0009294 denotes transfected
T13083 788-791 CHEBI_SO_EXT:DNA denotes DNA
T13084 813-821 CHEBI_EXT:35224 denotes effector
T13085 822-830 SO_EXT:0000155 denotes plasmids
T13086 835-838 NCBITaxon:11886 denotes RSV
T13087 850-853 NCBITaxon:11886 denotes RSV
T13088 854-858 PR_EXT:000007223 denotes Er81
T13089 867-870 NCBITaxon:11886 denotes RSV
T13090 871-874 PR_EXT:000007243 denotes EWS
T13091 875-879 PR_EXT:000007227 denotes Pea3
T13092 901-909 SO_EXT:0000155 denotes plasmids
T13093 948-953 CL_GO_EXT:cell denotes Cells
T13094 1018-1028 GO_EXT:0045289 denotes luciferase
T13095 1033-1037 PR_EXT:000033987 denotes LacZ
T13096 1077-1087 GO_EXT:0045289 denotes Luciferase
T13097 1109-1113 PR_EXT:000033987 denotes LacZ
T13098 1142-1152 GO_EXT:0045289 denotes luciferase

2_test

Id Subject Object Predicate Lexical cue
15836427-9734357-84719674 464-466 9734357 denotes 18
15836427-11096072-84719675 467-469 11096072 denotes 19
15836427-11854298-84719676 1072-1074 11854298 denotes 44
T37045 464-466 9734357 denotes 18
T55400 467-469 11096072 denotes 19
T31145 1072-1074 11854298 denotes 44

biosemtest

Id Subject Object Predicate Lexical cue
T12881 995-1004 UMLS/C1709694 denotes or assays
T12882 995-1004 UMLS/C1551390 denotes or assays
T12883 491-498 UMLS/C0333052 denotes ion of
T12884 634-641 UMLS/C1882979 denotes plasmid
T12885 634-641 UMLS/C1550141 denotes plasmid
T12886 482-490 UMLS/C0205349 denotes fied ver
T12887 1138-1149 UMLS/C1551375 denotes as lucifer
T12888 248-257 UMLS/C1883719 denotes insertion
T12889 361-370 UMLS/C1883719 denotes inserting
T12891 53-68 UMLS/C0040624 denotes transactivation
T12892 81-84 UMLS/C0035236 denotes RSV
T12893 327-330 UMLS/C0035236 denotes RSV
T12894 1044-1048 UMLS/C0022959 denotes ty a
T12895 1120-1124 UMLS/C0022959 denotes ty a
T12896 416-424 UMLS/C1510827 denotes affinity
T12897 903-911 UMLS/C1709908 denotes asmids p
T12898 995-1004 UMLS/C1522240 denotes or assays
T12899 650-652 UMLS/C0319022 denotes li
T12900 1016-1018 UMLS/C0319022 denotes e
T12901 1117-1119 UMLS/C0319022 denotes iv
T12902 551-554 UMLS/C0005341 denotes usi
T12903 14-22 UMLS/C0032136 denotes plasmids
T12904 642-649 UMLS/C0032136 denotes to norm
T12905 833-841 UMLS/C0032136 denotes c/RSV-em
T12906 912-920 UMLS/C0032136 denotes P-5xETS
T12907 1029-1039 UMLS/C0024075 denotes and LacZ a
T12908 1088-1098 UMLS/C0024075 denotes values nor
T12909 248-257 UMLS/C1512796 denotes insertion
T12910 1049-1057 UMLS/C0441655 denotes describ
T12911 1125-1133 UMLS/C0441655 denotes e referr
T12912 799-802 UMLS/C1325786 denotes ng
T12913 482-490 UMLS/C0392747 denotes fied ver
T12914 411-415 UMLS/C1522410 denotes high
T12915 1099-1105 UMLS/C1554112 denotes alized
T12916 903-911 UMLS/C1522485 denotes asmids p
T12917 634-641 UMLS/C1547100 denotes plasmid
T12918 959-964 UMLS/C1269647 denotes harve
T12919 108-118 UMLS/C0006754 denotes California
T12920 361-370 UMLS/C1549539 denotes inserting
T12921 803-812 UMLS/C1552866 denotes ne of the
T12922 1099-1105 UMLS/C1704610 denotes alized
T12923 120-133 UMLS/C0041703 denotes United States
T12924 385-389 UMLS/C1533153 denotes five
T12925 813-816 UMLS/C0205447 denotes eff
T12926 892-895 UMLS/C0205447 denotes rep
T12927 373-381 UMLS/C0450240 denotes cassette
T12928 361-370 UMLS/C1705172 denotes inserting
T12929 4-13 UMLS/C1719822 denotes following
T12931 69-75 UMLS/C0243073 denotes assays
T12932 1009-1015 UMLS/C0243073 denotes etermi
T12933 385-389 UMLS/C0205451 denotes five
T12935 37-52 UMLS/C0040649 denotes transcriptional
T12936 680-690 UMLS/C0013682 denotes cy (placZ)
T12937 741-752 UMLS/C1257858 denotes lls were co
T12938 81-84 UMLS/C0086943 denotes RSV
T12939 327-330 UMLS/C0086943 denotes RSV
T12940 1099-1105 UMLS/C0042295 denotes alized
T12941 1019-1028 UMLS/C0521095 denotes uciferase
T12942 667-679 UMLS/C0040669 denotes tion efficie
T12943 959-964 UMLS/C1704653 denotes harve
T12944 1049-1057 UMLS/C1561536 denotes describ
T12945 1125-1133 UMLS/C1561536 denotes e referr
T12946 361-370 UMLS/C1743766 denotes inserting
T12947 373-381 UMLS/C1706210 denotes cassette
T12948 634-641 UMLS/C0243148 denotes plasmid
T12949 1049-1057 UMLS/C0439167 denotes describ
T12950 1125-1133 UMLS/C0439167 denotes e referr
T12952 69-75 UMLS/C0005507 denotes assays
T12953 1009-1015 UMLS/C0005507 denotes etermi
T12954 793-798 UMLS/C0439175 denotes nclud
T12955 970-979 UMLS/C1512335 denotes fter 25 h
T12956 430-443 UMLS/C0005456 denotes binding sites
T12957 594-607 UMLS/C0005456 denotes ing sites (5′
T12958 346-357 UMLS/C0012931 denotes constructed
T12959 411-415 UMLS/C1561958 denotes high
T12960 411-415 UMLS/C1561957 denotes high
T12961 903-911 UMLS/C0335038 denotes asmids p
T12962 634-641 UMLS/C0009932 denotes plasmid
T12963 1138-1149 UMLS/C0205543 denotes as lucifer
T12964 980-985 UMLS/C0687676 denotes and p
T12965 373-381 UMLS/C2347567 denotes cassette
T12966 293-297 UMLS/C1136188 denotes gift
T12967 718-722 UMLS/C1136188 denotes m D.
T12968 653-662 UMLS/C1882115 denotes e for tra
T12969 1106-1116 UMLS/C1882115 denotes to LacZ ac
T12970 491-498 UMLS/C2607870 denotes ion of
T12971 411-415 UMLS/C0205250 denotes high
T12972 903-911 UMLS/C1705915 denotes asmids p
T12973 108-118 UMLS/C0324542 denotes California
T12974 803-812 UMLS/C2700399 denotes ne of the
T12975 799-802 UMLS/C0012854 denotes ng
T12976 563-570 UMLS/C1513776 denotes ted com
T12977 236-244 UMLS/C1301820 denotes obtained
T12978 634-641 UMLS/C0332298 denotes plasmid
T12979 1061-1070 UMLS/C1552738 denotes reviously
T12980 995-1004 UMLS/C1550044 denotes or assays
T12981 248-257 UMLS/C1705421 denotes insertion
T12982 4-13 UMLS/C0332282 denotes following
T12983 959-964 UMLS/C0007634 denotes harve
T12984 361-370 UMLS/C1881216 denotes inserting
T12985 959-964 UMLS/C1948049 denotes harve
T12986 4-13 UMLS/C0332283 denotes following
T12987 361-370 UMLS/C1881217 denotes inserting
T12988 361-370 UMLS/C1292748 denotes inserting
T12989 803-812 UMLS/C0332257 denotes ne of the
T12990 401-407 UMLS/C1948062 denotes copies
T12991 793-798 UMLS/C0439810 denotes nclud
T12992 980-985 UMLS/C0231290 denotes and p
T12993 236-244 UMLS/C1706701 denotes obtained
T12995 69-75 UMLS/C1510438 denotes assays
T12996 1009-1015 UMLS/C1510438 denotes etermi
T12997 959-964 UMLS/C1136359 denotes harve
T12998 563-570 UMLS/C0026882 denotes ted com
T12999 571-581 UMLS/C0009498 denotes lement of
T13000 293-297 UMLS/C0423899 denotes gift
T13001 718-722 UMLS/C0423899 denotes m D.
T13002 995-1004 UMLS/C1184743 denotes or assays
T13003 1138-1149 UMLS/C1555599 denotes as lucifer
T13004 411-415 UMLS/C1299351 denotes high
T13005 430-443 UMLS/C0682969 denotes binding sites
T13006 594-607 UMLS/C0682969 denotes ing sites (5′
T13007 634-641 UMLS/C2587213 denotes plasmid
T13008 1099-1105 UMLS/C1522609 denotes alized
T13009 248-257 UMLS/C0441587 denotes insertion
T13010 361-370 UMLS/C0441587 denotes inserting
T13011 401-407 UMLS/C0009992 denotes copies

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T13012 14-22 SO:0000155 denotes plasmids
T13013 81-84 NCBITaxon:11886 denotes RSV
T13014 140-143 NCBITaxon:11886 denotes RSV
T13015 144-148 PR:000007223 denotes Er81
T13016 154-157 NCBITaxon:11886 denotes RSV
T13017 158-161 PR:000007243 denotes EWS
T13018 162-166 PR:000007227 denotes Pea3
T13019 201-204 NCBITaxon:11886 denotes RSV
T13020 205-209 PR:000007223 denotes Er81
T13021 218-221 NCBITaxon:11886 denotes RSV
T13022 222-225 PR:000007243 denotes EWS
T13023 226-230 PR:000007227 denotes Pea3
T13024 275-279 PR:000007223 denotes Er81
T13025 283-286 PR:000007243 denotes EWS
T13026 287-291 PR:000007227 denotes Pea3
T13027 327-330 NCBITaxon:11886 denotes RSV
T13028 373-381 SO:0005853 denotes cassette
T13029 425-429 PR:000007227 denotes Pea3
T13030 430-443 SO:0000409 denotes binding sites
T13031 585-589 PR:000007227 denotes Pea3
T13032 590-603 SO:0000409 denotes binding sites
T13033 634-641 SO:0000155 denotes plasmid
T13034 659-671 GO:0009294 denotes transfection
T13035 753-764 GO:0009294 denotes transfected
T13036 813-821 CHEBI:35224 denotes effector
T13037 822-830 SO:0000155 denotes plasmids
T13038 835-838 NCBITaxon:11886 denotes RSV
T13039 850-853 NCBITaxon:11886 denotes RSV
T13040 854-858 PR:000007223 denotes Er81
T13041 867-870 NCBITaxon:11886 denotes RSV
T13042 871-874 PR:000007243 denotes EWS
T13043 875-879 PR:000007227 denotes Pea3
T13044 901-909 SO:0000155 denotes plasmids
T13045 1033-1037 PR:000033987 denotes LacZ
T13046 1109-1113 PR:000033987 denotes LacZ