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PMC:1084331 / 3944-4215 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1992 0-271 sentence denotes In particular, in the absence of Er81, achieved by mutation in the gene or by deprivation of peripheral neurotrophin signaling, group Ia proprioceptive afferents fail to invade the ventral spinal cord and to make effective synaptic connections with motor neurons [9,14].
T1993 1-3 IN denotes In
T1994 163-167 VBP denotes fail
T1995 4-14 JJ denotes particular
T1996 14-16 , denotes ,
T1997 16-18 IN denotes in
T1998 19-22 DT denotes the
T1999 23-30 NN denotes absence
T2000 31-33 IN denotes of
T2001 34-38 NN denotes Er81
T2002 38-40 , denotes ,
T2003 40-48 VBN denotes achieved
T2004 49-51 IN denotes by
T2005 52-60 NN denotes mutation
T2006 61-63 IN denotes in
T2007 64-67 DT denotes the
T2008 68-72 NN denotes gene
T2009 73-75 CC denotes or
T2010 76-78 IN denotes by
T2011 79-90 NN denotes deprivation
T2012 91-93 IN denotes of
T2013 94-104 JJ denotes peripheral
T2014 118-127 NN denotes signaling
T2015 105-117 NN denotes neurotrophin
T2016 127-129 , denotes ,
T2017 129-134 NN denotes group
T2018 135-137 NN denotes Ia
T2019 153-162 NNS denotes afferents
T2020 138-152 JJ denotes proprioceptive
T2021 168-170 TO denotes to
T2022 171-177 VB denotes invade
T2023 178-181 DT denotes the
T2024 197-201 NN denotes cord
T2025 182-189 JJ denotes ventral
T2026 190-196 JJ denotes spinal
T2027 202-205 CC denotes and
T2028 206-208 TO denotes to
T2029 209-213 VB denotes make
T2030 214-223 JJ denotes effective
T2031 233-244 NNS denotes connections
T2032 224-232 JJ denotes synaptic
T2033 245-249 IN denotes with
T2034 250-255 NN denotes motor
T2035 256-263 NNS denotes neurons
T2036 264-265 -LRB- denotes [
T2037 267-269 CD denotes 14
T2038 265-266 CD denotes 9
T2039 266-267 , denotes ,
T2040 269-270 -RRB- denotes ]
T2041 270-271 . denotes .
R572 T1993 T1994 prep In,fail
R574 T1995 T1993 amod particular,In
R575 T1996 T1994 punct ", ",fail
R577 T1997 T1994 prep in,fail
R578 T1998 T1999 det the,absence
R580 T1999 T1997 pobj absence,in
R581 T2000 T1999 prep of,absence
R582 T2001 T2000 pobj Er81,of
R584 T2002 T1999 punct ", ",absence
R585 T2003 T1999 acl achieved,absence
R586 T2004 T2003 prep by,achieved
R587 T2005 T2004 pobj mutation,by
R589 T2006 T2005 prep in,mutation
R590 T2007 T2008 det the,gene
R591 T2008 T2006 pobj gene,in
R592 T2009 T2004 cc or,by
R594 T2010 T2004 conj by,by
R595 T2011 T2010 pobj deprivation,by
R597 T2012 T2011 prep of,deprivation
R598 T2013 T2014 amod peripheral,signaling
R600 T2014 T2012 pobj signaling,of
R601 T2015 T2014 compound neurotrophin,signaling
R603 T2016 T1994 punct ", ",fail
R604 T2017 T2018 nmod group,Ia
R605 T2018 T2019 nmod Ia,afferents
R607 T2019 T1994 nsubj afferents,fail
R608 T2020 T2019 amod proprioceptive,afferents
R610 T2021 T2022 aux to,invade
R611 T2022 T1994 xcomp invade,fail
R612 T2023 T2024 det the,cord
R614 T2024 T2022 dobj cord,invade
R615 T2025 T2024 amod ventral,cord
R617 T2026 T2024 amod spinal,cord
R618 T2027 T2022 cc and,invade
R619 T2028 T2029 aux to,make
R620 T2029 T2022 conj make,invade
R623 T2030 T2031 amod effective,connections
R625 T2031 T2029 dobj connections,make
R626 T2032 T2031 amod synaptic,connections
R627 T2033 T2031 prep with,connections
R629 T2034 T2035 compound motor,neurons
R630 T2035 T2033 pobj neurons,with
R631 T2036 T2037 punct [,14
R633 T2037 T1994 parataxis 14,fail
R634 T2038 T2037 nummod 9,14
R636 T2039 T2037 punct ",",14
R637 T2040 T2037 punct ],14
R639 T2041 T1994 punct .,fail

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1450 34-38 PR_EXT:000007223 denotes Er81
T1451 52-60 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T1452 68-72 SO_EXT:0000704 denotes gene
T1453 105-117 PR_EXT:000021998 denotes neurotrophin
T1454 105-127 GO:0038179 denotes neurotrophin signaling
T1455 138-152 GO:0019230 denotes proprioceptive
T1456 182-201 UBERON:0002257 denotes ventral spinal cord
T1457 224-244 GO:0045202 denotes synaptic connections
T1458 250-255 GO_EXT:biological_movement_or_translocation_process denotes motor
T1459 250-263 CL:0000100 denotes motor neurons

2_test

Id Subject Object Predicate Lexical cue
15836427-12741988-84719616 265-266 12741988 denotes 9
15836427-10850491-84719617 267-269 10850491 denotes 14
T32558 265-266 12741988 denotes 9
T60907 267-269 10850491 denotes 14

biosemtest

Id Subject Object Predicate Lexical cue
T573 153-162 UMLS/C0205115 denotes afferents
T590 94-104 UMLS/C0205100 denotes peripheral
T611 79-90 UMLS/C0871712 denotes deprivation
T616 105-117 UMLS/C0027754 denotes neurotrophin
T628 129-134 UMLS/C1522242 denotes group
T638 168-170 UMLS/C0319022 denotes to
T639 206-208 UMLS/C0319022 denotes to
T683 129-134 UMLS/C1561557 denotes group
T720 23-30 UMLS/C0424530 denotes absence
T734 250-263 UMLS/C0026609 denotes motor neurons
T744 23-30 UMLS/C0332197 denotes absence
T750 135-137 UMLS/C1947960 denotes Ia
T759 105-117 UMLS/C1323315 denotes neurotrophin
T801 129-134 UMLS/C1552516 denotes group
T845 105-117 UMLS/C0132298 denotes neurotrophin
T850 129-134 UMLS/C0441833 denotes group
T873 163-167 UMLS/C0231175 denotes fail
T874 52-60 UMLS/C0026882 denotes mutation
T889 171-177 UMLS/C1517574 denotes invade
T925 214-223 UMLS/C1704419 denotes effective
T939 190-201 UMLS/C1278836 denotes spinal cord
T948 135-137 UMLS/C0444974 denotes Ia
T955 182-189 UMLS/C1704448 denotes ventral
T978 105-117 UMLS/C1332408 denotes neurotrophin
T982 52-60 UMLS/C1705285 denotes mutation
T984 190-201 UMLS/C0037925 denotes spinal cord
T986 190-201 UMLS/C0037928 denotes spinal cord
T1018 129-134 UMLS/C1257890 denotes group
T1024 129-134 UMLS/C1552839 denotes group
T1029 23-30 UMLS/C1689985 denotes absence
T1036 118-127 UMLS/C0037083 denotes signaling
T1050 233-244 UMLS/C0449379 denotes connections
T1058 129-134 UMLS/C0439745 denotes group
T1132 118-127 UMLS/C1710082 denotes signaling
T1141 129-134 UMLS/C1705428 denotes group
T1143 129-134 UMLS/C1705429 denotes group

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1304 34-38 PR:000007223 denotes Er81
T1305 68-72 SO:0000704 denotes gene
T1306 105-117 PR:000021998 denotes neurotrophin
T1307 105-127 GO:0038179 denotes neurotrophin signaling
T1308 138-152 GO:0019230 denotes proprioceptive
T1309 182-201 UBERON:0002257 denotes ventral spinal cord
T1310 224-244 GO:0045202 denotes synaptic connections
T1311 250-263 CL:0000100 denotes motor neurons