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first analyzed expression of TrkC, a gene downregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7A and 7B). The level of expression of TrkC was indistinguishable from wild-type in DRG neurons of Er81EWS-Pea3/− and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7A, 7C, and 7D). Moreover, PV was not expressed in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure S5) but was expressed by proprioceptive afferents in both wild-type and Er81EWS-Pea3/− embryos (see Figures 1 and S5) [14]. We also found several genes that were ectopically upregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7). Calretinin and Calbindin, two different calcium-binding proteins expressed by subpopulations of DRG neurons in wild-type, Er81EWS-Pea3/−, and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7E, 7G, and 7H; data not shown) [31,32], were induced in more than 95% of all DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figures 7F and S5). These findings suggest that DRG neurons in TauEWS-Pea3/+ Isl1Cre/+ embryos fail to differentiate to a normal fate and instead acquire an aberrant identity distinct from any subpopulation of wild-type DRG neurons. Finally, to assess whether EWS-Pea3 expressed precociously acts exclusively cell-autonomously or whether it may also influence neighboring DRG neurons, we activated expression of EWS-Pea3 using Hb9Cre mice [33]. Due to a transient and rostro-caudally graded expression of Hb9 at neural plate stages, very few DRG neurons at brachial levels and increasingly more neurons progressing caudally undergo recombination in TauEWS-Pea3/+ Hb9Cre/+ and TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Nevertheless, downregulation of Trk receptor expression or upregulation of Calretinin is restricted exclusively to neurons that have undergone recombination and cannot be observed in TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Together, these results and the findings obtained from in vitro culture experiments (see Figures 4 and 5) demonstrate that precocious or isochronic expression of EWS-Pea3 in the same neurons leads to significantly different cell-autonomous cellular responses with respect to gene expression, neuronal survival, and neurite outgrowth (Figure 9)."}

    craft-ca-core-ex-dev

    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T8617","span":{"begin":738,"end":747},"obj":"SO_EXT:wild_type_entity_or_quality"},{"id":"T8618","span":{"begin":749,"end":753},"obj":"PR_EXT:000007223"},{"id":"T8619","span":{"begin":753,"end":756},"obj":"PR_EXT:000007243"},{"id":"T8620","span":{"begin":757,"end":761},"obj":"PR_EXT:000007227"},{"id":"T8621","span":{"begin":762,"end":763},"obj":"SO_EXT:sequence_nullness_or_absence"},{"id":"T8622","span":{"begin":769,"end":772},"obj":"PR_EXT:000010173"},{"id":"T8623","span":{"begin":772,"end":775},"obj":"PR_EXT:000007243"},{"id":"T8624","span":{"begin":776,"end":780},"obj":"PR_EXT:000007227"},{"id":"T8625","span":{"begin":781,"end":782},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8626","span":{"begin":783,"end":785},"obj":"PR_EXT:000013502"},{"id":"T8627","span":{"begin":789,"end":790},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8628","span":{"begin":791,"end":798},"obj":"UBERON:0000922"},{"id":"T8629","span":{"begin":885,"end":888},"obj":"UBERON:0000044"},{"id":"T8630","span":{"begin":889,"end":896},"obj":"CL:0000540"},{"id":"T8631","span":{"begin":900,"end":903},"obj":"PR_EXT:000010173"},{"id":"T8632","span":{"begin":903,"end":906},"obj":"PR_EXT:000007243"},{"id":"T8633","span":{"begin":907,"end":911},"obj":"PR_EXT:000007227"},{"id":"T8634","span":{"begin":912,"end":913},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8635","span":{"begin":914,"end":918},"obj":"PR_EXT:000009116"},{"id":"T8636","span":{"begin":922,"end":923},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8637","span":{"begin":924,"end":931},"obj":"UBERON:0000922"},{"id":"T8638","span":{"begin":981,"end":984},"obj":"UBERON:0000044"},{"id":"T8639","span":{"begin":985,"end":992},"obj":"CL:0000540"},{"id":"T8640","span":{"begin":996,"end":999},"obj":"PR_EXT:000010173"},{"id":"T8641","span":{"begin":999,"end":1002},"obj":"PR_EXT:000007243"},{"id":"T8642","span":{"begin":1003,"end":1007},"obj":"PR_EXT:000007227"},{"id":"T8643","span":{"begin":1008,"end":1009},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8644","span":{"begin":1010,"end":1014},"obj":"PR_EXT:000009116"},{"id":"T8645","span":{"begin":1018,"end":1019},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8646","span":{"begin":1020,"end":1027},"obj":"UBERON:0000922"},{"id":"T8647","span":{"begin":1036,"end":1049},"obj":"GO_RO_EXT:developmental_differentiation_process"},{"id":"T8648","span":{"begin":1143,"end":1152},"obj":"SO_EXT:wild_type_entity_or_quality"},{"id":"T8649","span":{"begin":1153,"end":1156},"obj":"UBERON:0000044"},{"id":"T8650","span":{"begin":1157,"end":1164},"obj":"CL:0000540"},{"id":"T8651","span":{"begin":1193,"end":1196},"obj":"PR_EXT:000007243"},{"id":"T8652","span":{"begin":1197,"end":1201},"obj":"PR_EXT:000007227"},{"id":"T8653","span":{"begin":1202,"end":1211},"obj":"GO:0010467"},{"id":"T8654","span":{"begin":1242,"end":1246},"obj":"CL_GO_EXT:cell"},{"id":"T8655","span":{"begin":1305,"end":1308},"obj":"UBERON:0000044"},{"id":"T8656","span":{"begin":1309,"end":1316},"obj":"CL:0000540"},{"id":"T8657","span":{"begin":1331,"end":1341},"obj":"GO:0010467"},{"id":"T8658","span":{"begin":1345,"end":1348},"obj":"PR_EXT:000007243"},{"id":"T8659","span":{"begin":1349,"end":1353},"obj":"PR_EXT:000007227"},{"id":"T8660","span":{"begin":1360,"end":1363},"obj":"PR_EXT:000010501"},{"id":"T8661","span":{"begin":1367,"end":1371},"obj":"NCBITaxon:10088"},{"id":"T8662","span":{"begin":1424,"end":1434},"obj":"GO:0010467"},{"id":"T8663","span":{"begin":1438,"end":1441},"obj":"PR_EXT:000010501"},{"id":"T8664","span":{"begin":1445,"end":1457},"obj":"UBERON:0003075"},{"id":"T8665","span":{"begin":1475,"end":1478},"obj":"UBERON:0000044"},{"id":"T8666","span":{"begin":1479,"end":1486},"obj":"CL:0000540"},{"id":"T8667","span":{"begin":1490,"end":1498},"obj":"UBERON:0001460"},{"id":"T8668","span":{"begin":1528,"end":1535},"obj":"CL:0000540"},{"id":"T8669","span":{"begin":1565,"end":1578},"obj":"GO_SO_EXT:sequence_rearrangement_process"},{"id":"T8670","span":{"begin":1582,"end":1585},"obj":"PR_EXT:000010173"},{"id":"T8671","span":{"begin":1585,"end":1588},"obj":"PR_EXT:000007243"},{"id":"T8672","span":{"begin":1589,"end":1593},"obj":"PR_EXT:000007227"},{"id":"T8673","span":{"begin":1594,"end":1595},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8674","span":{"begin":1596,"end":1599},"obj":"PR_EXT:000010501"},{"id":"T8675","span":{"begin":1603,"end":1604},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8676","span":{"begin":1609,"end":1612},"obj":"PR_EXT:000010173"},{"id":"T8677","span":{"begin":1617,"end":1618},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8678","span":{"begin":1619,"end":1622},"obj":"PR_EXT:000010501"},{"id":"T8679","span":{"begin":1626,"end":1627},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8680","span":{"begin":1628,"end":1635},"obj":"UBERON:0000922"},{"id":"T8681","span":{"begin":1662,"end":1679},"obj":"_FRAGMENT"},{"id":"T8682","span":{"begin":1693,"end":1703},"obj":"GO:0010629"},{"id":"T8683","span":{"begin":1680,"end":1692},"obj":"PR_EXT:000021997"},{"id":"T8684","span":{"begin":1684,"end":1692},"obj":"GO_EXT:0004872"},{"id":"T8685","span":{"begin":1707,"end":1719},"obj":"GO_EXT:positive_regulation"},{"id":"T8686","span":{"begin":1723,"end":1733},"obj":"PR_EXT:000004968"},{"id":"T8687","span":{"begin":1763,"end":1770},"obj":"CL:0000540"},{"id":"T8688","span":{"begin":1791,"end":1804},"obj":"GO_SO_EXT:sequence_rearrangement_process"},{"id":"T8689","span":{"begin":1831,"end":1834},"obj":"PR_EXT:000010173"},{"id":"T8690","span":{"begin":1839,"end":1840},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8691","span":{"begin":1841,"end":1844},"obj":"PR_EXT:000010501"},{"id":"T8692","span":{"begin":1848,"end":1849},"obj":"SO_EXT:normal_or_wild_type_or_present"},{"id":"T8693","span":{"begin":1850,"end":1857},"obj":"UBERON:0000922"},{"id":"T8694","span":{"begin":2018,"end":2028},"obj":"GO:0010467"},{"id":"T8695","span":{"begin":2032,"end":2035},"obj":"PR_EXT:000007243"},{"id":"T8696","span":{"begin":2036,"end":2040},"obj":"PR_EXT:000007227"},{"id":"T8697","span":{"begin":2053,"end":2060},"obj":"CL:0000540"},{"id":"T8698","span":{"begin":2094,"end":2098},"obj":"CL_GO_EXT:cell"},{"id":"T8699","span":{"begin":2110,"end":2118},"obj":"CL_GO_EXT:cell"},{"id":"T8700","span":{"begin":2119,"end":2128},"obj":"GO_EXT:reaction_or_response"},{"id":"T8701","span":{"begin":2145,"end":2149},"obj":"SO_EXT:0000704"},{"id":"T8702","span":{"begin":2145,"end":2160},"obj":"GO:0010467"},{"id":"T8703","span":{"begin":2162,"end":2170},"obj":"CL:0000540"},{"id":"T8704","span":{"begin":2185,"end":2192},"obj":"GO:0043005"}],"relations":[{"id":"R3682","pred":"_lexicallyChainedTo","subj":"T8682","obj":"T8681"}],"text":"We first analyzed expression of TrkC, a gene downregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7A and 7B). The level of expression of TrkC was indistinguishable from wild-type in DRG neurons of Er81EWS-Pea3/− and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7A, 7C, and 7D). Moreover, PV was not expressed in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure S5) but was expressed by proprioceptive afferents in both wild-type and Er81EWS-Pea3/− embryos (see Figures 1 and S5) [14]. We also found several genes that were ectopically upregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7). Calretinin and Calbindin, two different calcium-binding proteins expressed by subpopulations of DRG neurons in wild-type, Er81EWS-Pea3/−, and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7E, 7G, and 7H; data not shown) [31,32], were induced in more than 95% of all DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figures 7F and S5). These findings suggest that DRG neurons in TauEWS-Pea3/+ Isl1Cre/+ embryos fail to differentiate to a normal fate and instead acquire an aberrant identity distinct from any subpopulation of wild-type DRG neurons. Finally, to assess whether EWS-Pea3 expressed precociously acts exclusively cell-autonomously or whether it may also influence neighboring DRG neurons, we activated expression of EWS-Pea3 using Hb9Cre mice [33]. Due to a transient and rostro-caudally graded expression of Hb9 at neural plate stages, very few DRG neurons at brachial levels and increasingly more neurons progressing caudally undergo recombination in TauEWS-Pea3/+ Hb9Cre/+ and TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Nevertheless, downregulation of Trk receptor expression or upregulation of Calretinin is restricted exclusively to neurons that have undergone recombination and cannot be observed in TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Together, these results and the findings obtained from in vitro culture experiments (see Figures 4 and 5) demonstrate that precocious or isochronic expression of EWS-Pea3 in the same neurons leads to significantly different cell-autonomous cellular responses with respect to gene expression, neuronal survival, and neurite outgrowth (Figure 9)."}

    2_test

    {"project":"2_test","denotations":[{"id":"15836427-10850491-84719644","span":{"begin":498,"end":500},"obj":"10850491"},{"id":"15836427-2081815-84719645","span":{"begin":840,"end":842},"obj":"2081815"},{"id":"15836427-7812779-84719646","span":{"begin":843,"end":845},"obj":"7812779"},{"id":"15836427-11395002-84719647","span":{"begin":1373,"end":1375},"obj":"11395002"},{"id":"T86888","span":{"begin":498,"end":500},"obj":"10850491"},{"id":"T13726","span":{"begin":840,"end":842},"obj":"2081815"},{"id":"T49503","span":{"begin":843,"end":845},"obj":"7812779"},{"id":"T58140","span":{"begin":1373,"end":1375},"obj":"11395002"}],"text":"We first analyzed expression of TrkC, a gene downregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7A and 7B). The level of expression of TrkC was indistinguishable from wild-type in DRG neurons of Er81EWS-Pea3/− and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7A, 7C, and 7D). Moreover, PV was not expressed in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure S5) but was expressed by proprioceptive afferents in both wild-type and Er81EWS-Pea3/− embryos (see Figures 1 and S5) [14]. We also found several genes that were ectopically upregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7). Calretinin and Calbindin, two different calcium-binding proteins expressed by subpopulations of DRG neurons in wild-type, Er81EWS-Pea3/−, and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7E, 7G, and 7H; data not shown) [31,32], were induced in more than 95% of all DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figures 7F and S5). These findings suggest that DRG neurons in TauEWS-Pea3/+ Isl1Cre/+ embryos fail to differentiate to a normal fate and instead acquire an aberrant identity distinct from any subpopulation of wild-type DRG neurons. Finally, to assess whether EWS-Pea3 expressed precociously acts exclusively cell-autonomously or whether it may also influence neighboring DRG neurons, we activated expression of EWS-Pea3 using Hb9Cre mice [33]. Due to a transient and rostro-caudally graded expression of Hb9 at neural plate stages, very few DRG neurons at brachial levels and increasingly more neurons progressing caudally undergo recombination in TauEWS-Pea3/+ Hb9Cre/+ and TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Nevertheless, downregulation of Trk receptor expression or upregulation of Calretinin is restricted exclusively to neurons that have undergone recombination and cannot be observed in TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Together, these results and the findings obtained from in vitro culture experiments (see Figures 4 and 5) demonstrate that precocious or isochronic expression of EWS-Pea3 in the same neurons leads to significantly different cell-autonomous cellular responses with respect to gene expression, neuronal survival, and neurite outgrowth (Figure 9)."}

    biosemtest

    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first analyzed expression of TrkC, a gene downregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7A and 7B). The level of expression of TrkC was indistinguishable from wild-type in DRG neurons of Er81EWS-Pea3/− and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7A, 7C, and 7D). Moreover, PV was not expressed in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure S5) but was expressed by proprioceptive afferents in both wild-type and Er81EWS-Pea3/− embryos (see Figures 1 and S5) [14]. We also found several genes that were ectopically upregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7). Calretinin and Calbindin, two different calcium-binding proteins expressed by subpopulations of DRG neurons in wild-type, Er81EWS-Pea3/−, and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7E, 7G, and 7H; data not shown) [31,32], were induced in more than 95% of all DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figures 7F and S5). These findings suggest that DRG neurons in TauEWS-Pea3/+ Isl1Cre/+ embryos fail to differentiate to a normal fate and instead acquire an aberrant identity distinct from any subpopulation of wild-type DRG neurons. Finally, to assess whether EWS-Pea3 expressed precociously acts exclusively cell-autonomously or whether it may also influence neighboring DRG neurons, we activated expression of EWS-Pea3 using Hb9Cre mice [33]. Due to a transient and rostro-caudally graded expression of Hb9 at neural plate stages, very few DRG neurons at brachial levels and increasingly more neurons progressing caudally undergo recombination in TauEWS-Pea3/+ Hb9Cre/+ and TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Nevertheless, downregulation of Trk receptor expression or upregulation of Calretinin is restricted exclusively to neurons that have undergone recombination and cannot be observed in TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Together, these results and the findings obtained from in vitro culture experiments (see Figures 4 and 5) demonstrate that precocious or isochronic expression of EWS-Pea3 in the same neurons leads to significantly different cell-autonomous cellular responses with respect to gene expression, neuronal survival, and neurite outgrowth (Figure 9)."}

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first analyzed expression of TrkC, a gene downregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7A and 7B). The level of expression of TrkC was indistinguishable from wild-type in DRG neurons of Er81EWS-Pea3/− and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7A, 7C, and 7D). Moreover, PV was not expressed in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure S5) but was expressed by proprioceptive afferents in both wild-type and Er81EWS-Pea3/− embryos (see Figures 1 and S5) [14]. We also found several genes that were ectopically upregulated in DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figure 7). Calretinin and Calbindin, two different calcium-binding proteins expressed by subpopulations of DRG neurons in wild-type, Er81EWS-Pea3/−, and TauEWS-Pea3/+ PVCre/+ embryos (Figure 7E, 7G, and 7H; data not shown) [31,32], were induced in more than 95% of all DRG neurons of TauEWS-Pea3/+ Isl1Cre/+ embryos (Figures 7F and S5). These findings suggest that DRG neurons in TauEWS-Pea3/+ Isl1Cre/+ embryos fail to differentiate to a normal fate and instead acquire an aberrant identity distinct from any subpopulation of wild-type DRG neurons. Finally, to assess whether EWS-Pea3 expressed precociously acts exclusively cell-autonomously or whether it may also influence neighboring DRG neurons, we activated expression of EWS-Pea3 using Hb9Cre mice [33]. Due to a transient and rostro-caudally graded expression of Hb9 at neural plate stages, very few DRG neurons at brachial levels and increasingly more neurons progressing caudally undergo recombination in TauEWS-Pea3/+ Hb9Cre/+ and TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Nevertheless, downregulation of Trk receptor expression or upregulation of Calretinin is restricted exclusively to neurons that have undergone recombination and cannot be observed in TaumGFP/+ Hb9Cre/+ embryos (Figure 8). Together, these results and the findings obtained from in vitro culture experiments (see Figures 4 and 5) demonstrate that precocious or isochronic expression of EWS-Pea3 in the same neurons leads to significantly different cell-autonomous cellular responses with respect to gene expression, neuronal survival, and neurite outgrowth (Figure 9)."}