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PMC:1084331 / 17670-17973 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5813 0-303 sentence denotes In addition, there was a significant reduction in the number of muscle spindles in TauEWS-Pea3/+ Isl1Cre/+ embryos (approximately 25% of wild-type complement; n = 3) as assessed by innervation and expression of genes specific for intrafusal muscle fibers such as Egr3 (Figure 3E, 3F, 3K, and 3L; [26]).
T5814 1-3 IN denotes In
T5815 20-23 VBD denotes was
T5816 4-12 NN denotes addition
T5817 12-14 , denotes ,
T5818 14-19 EX denotes there
T5819 24-25 DT denotes a
T5820 38-47 NN denotes reduction
T5821 26-37 JJ denotes significant
T5822 48-50 IN denotes in
T5823 51-54 DT denotes the
T5824 55-61 NN denotes number
T5825 62-64 IN denotes of
T5826 65-71 NN denotes muscle
T5827 72-80 NNS denotes spindles
T5828 81-83 IN denotes in
T5829 84-90 NN denotes TauEWS
T5830 98-105 NN denotes Isl1Cre
T5831 90-91 HYPH denotes -
T5832 91-95 NN denotes Pea3
T5833 95-96 HYPH denotes /
T5834 96-97 SYM denotes +
T5835 108-115 NNS denotes embryos
T5836 105-106 HYPH denotes /
T5837 106-107 SYM denotes +
T5838 116-117 -LRB- denotes (
T5839 133-134 NN denotes %
T5840 117-130 RB denotes approximately
T5841 131-133 CD denotes 25
T5842 135-137 IN denotes of
T5843 138-142 JJ denotes wild
T5844 143-147 NN denotes type
T5845 142-143 HYPH denotes -
T5846 148-158 NN denotes complement
T5847 158-159 : denotes ;
T5848 160-161 NN denotes n
T5849 164-165 CD denotes 3
T5850 162-163 SYM denotes =
T5851 165-166 -RRB- denotes )
T5852 167-169 IN denotes as
T5853 170-178 VBN denotes assessed
T5854 179-181 IN denotes by
T5855 182-193 NN denotes innervation
T5856 194-197 CC denotes and
T5857 198-208 NN denotes expression
T5858 209-211 IN denotes of
T5859 212-217 NNS denotes genes
T5860 218-226 JJ denotes specific
T5861 227-230 IN denotes for
T5862 231-241 JJ denotes intrafusal
T5863 249-255 NNS denotes fibers
T5864 242-248 NN denotes muscle
T5865 256-260 JJ denotes such
T5866 261-263 IN denotes as
T5867 264-268 NN denotes Egr3
T5868 269-270 -LRB- denotes (
T5869 298-300 CD denotes 26
T5870 270-276 NN denotes Figure
T5871 277-279 NN denotes 3E
T5872 279-281 , denotes ,
T5873 281-283 NN denotes 3F
T5874 283-285 , denotes ,
T5875 285-287 NN denotes 3K
T5876 287-289 , denotes ,
T5877 289-292 CC denotes and
T5878 293-295 NN denotes 3L
T5879 295-296 : denotes ;
T5880 297-298 -LRB- denotes [
T5881 300-301 -RRB- denotes ]
T5882 301-302 -RRB- denotes )
T5883 302-303 . denotes .
R2331 T5814 T5815 prep In,was
R2332 T5816 T5814 pobj addition,In
R2333 T5817 T5815 punct ", ",was
R2334 T5818 T5815 expl there,was
R2335 T5819 T5820 det a,reduction
R2336 T5820 T5815 attr reduction,was
R2337 T5821 T5820 amod significant,reduction
R2338 T5822 T5820 prep in,reduction
R2339 T5823 T5824 det the,number
R2340 T5824 T5822 pobj number,in
R2341 T5825 T5824 prep of,number
R2342 T5826 T5827 compound muscle,spindles
R2343 T5827 T5825 pobj spindles,of
R2344 T5828 T5827 prep in,spindles
R2345 T5829 T5830 nmod TauEWS,Isl1Cre
R2346 T5830 T5835 nmod Isl1Cre,embryos
R2347 T5831 T5830 punct -,Isl1Cre
R2348 T5832 T5830 nmod Pea3,Isl1Cre
R2349 T5833 T5830 punct /,Isl1Cre
R2350 T5834 T5830 punct +,Isl1Cre
R2351 T5835 T5828 pobj embryos,in
R2352 T5836 T5830 punct /,Isl1Cre
R2353 T5837 T5830 punct +,Isl1Cre
R2354 T5838 T5839 punct (,%
R2355 T5839 T5824 parataxis %,number
R2356 T5840 T5841 advmod approximately,25
R2357 T5841 T5839 nummod 25,%
R2358 T5842 T5839 prep of,%
R2359 T5843 T5844 amod wild,type
R2360 T5844 T5846 compound type,complement
R2361 T5845 T5844 punct -,type
R2362 T5846 T5842 pobj complement,of
R2363 T5847 T5839 punct ;,%
R2364 T5848 T5849 nsubj n,3
R2365 T5849 T5839 ccomp 3,%
R2366 T5850 T5849 punct =,3
R2367 T5851 T5839 punct ),%
R2368 T5852 T5853 mark as,assessed
R2369 T5853 T5815 advcl assessed,was
R2370 T5854 T5853 prep by,assessed
R2371 T5855 T5854 pobj innervation,by
R2372 T5856 T5855 cc and,innervation
R2373 T5857 T5855 conj expression,innervation
R2374 T5858 T5855 prep of,innervation
R2375 T5859 T5858 pobj genes,of
R2376 T5860 T5859 amod specific,genes
R2377 T5861 T5860 prep for,specific
R2378 T5862 T5863 amod intrafusal,fibers
R2379 T5863 T5861 pobj fibers,for
R2380 T5864 T5863 compound muscle,fibers
R2381 T5865 T5866 amod such,as
R2382 T5866 T5863 prep as,fibers
R2383 T5867 T5866 pobj Egr3,as
R2384 T5868 T5869 punct (,26
R2385 T5869 T5853 parataxis 26,assessed
R2386 T5870 T5871 compound Figure,3E
R2387 T5871 T5869 dep 3E,26
R2388 T5872 T5871 punct ", ",3E
R2389 T5873 T5871 conj 3F,3E
R2390 T5874 T5873 punct ", ",3F
R2391 T5875 T5873 conj 3K,3F
R2392 T5876 T5875 punct ", ",3K
R2393 T5877 T5875 cc and,3K
R2394 T5878 T5875 conj 3L,3K
R2395 T5879 T5869 punct ;,26
R2396 T5880 T5869 punct [,26
R2397 T5881 T5869 punct ],26
R2398 T5882 T5869 punct ),26
R2399 T5883 T5815 punct .,was

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5227 65-80 UBERON:0003718 denotes muscle spindles
T5228 84-87 PR_EXT:000010173 denotes Tau
T5229 87-90 PR_EXT:000007243 denotes EWS
T5230 91-95 PR_EXT:000007227 denotes Pea3
T5231 96-97 SO_EXT:normal_or_wild_type_or_present denotes +
T5232 98-102 PR_EXT:000009116 denotes Isl1
T5233 106-107 SO_EXT:normal_or_wild_type_or_present denotes +
T5234 108-115 UBERON:0000922 denotes embryos
T5235 138-147 SO_EXT:wild_type_entity_or_quality denotes wild-type
T5236 182-193 GO_UBERON_EXT:innervation_entity_or_process denotes innervation
T5237 198-208 GO:0010467 denotes expression
T5238 212-217 SO_EXT:0000704 denotes genes
T5239 242-248 UBERON_EXT:muscle_structure_or_tissue denotes muscle
T5240 242-255 CL:0000187 denotes muscle fibers
T5241 264-268 PR_EXT:000006939 denotes Egr3

2_test

Id Subject Object Predicate Lexical cue
15836427-12495620-84719637 298-300 12495620 denotes 26
T91928 298-300 12495620 denotes 26

biosemtest

Id Subject Object Predicate Lexical cue
T4540 34-45 UMLS/C0750502 denotes ant reducti
T4575 46-55 UMLS/C0392756 denotes n in the
T4596 178-186 UMLS/C1516048 denotes by inne
T4611 146-155 UMLS/C1883559 denotes e complem
T4618 63-69 UMLS/C1709287 denotes f musc
T4630 206-216 UMLS/C0017262 denotes on of gene
T4680 190-201 UMLS/C0026828 denotes ion and exp
T4702 116-123 UMLS/C1305370 denotes (approx
T4712 206-216 UMLS/C0185117 denotes on of gene
T4723 73-88 UMLS/C0027871 denotes pindles in TauE
T4769 250-263 UMLS/C0242697 denotes ibers such as
T4774 226-234 UMLS/C0205369 denotes for int
T4779 190-201 UMLS/C0021516 denotes ion and exp
T4780 12-20 UMLS/C1883712 denotes , there
T4805 63-69 UMLS/C0449788 denotes f musc
T4823 63-69 UMLS/C1554106 denotes f musc
T4839 190-201 UMLS/C1619351 denotes ion and exp
T4875 116-123 UMLS/C0013935 denotes (approx
T4877 46-55 UMLS/C0301630 denotes n in the
T4916 63-69 UMLS/C0237753 denotes f musc
T4926 226-234 UMLS/C1552740 denotes for int
T4938 46-55 UMLS/C0441610 denotes n in the
T4940 156-166 UMLS/C0009498 denotes nt; n = 3)
T4941 34-45 UMLS/C1546944 denotes ant reducti
T4961 125-138 UMLS/C0332232 denotes ately 25% of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5067 65-80 UBERON:0003718 denotes muscle spindles
T5068 84-87 PR:000010173 denotes Tau
T5069 87-90 PR:000007243 denotes EWS
T5070 91-95 PR:000007227 denotes Pea3
T5071 98-102 PR:000009116 denotes Isl1
T5072 108-115 UBERON:0000922 denotes embryos
T5073 198-208 GO:0010467 denotes expression
T5074 212-217 SO:0000704 denotes genes
T5075 242-255 CL:0000187 denotes muscle fibers
T5076 264-268 PR:000006939 denotes Egr3