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craft-sa-dev

Id Subject Object Predicate Lexical cue
T276 0-171 sentence denotes Two ETS transcription factors of the Pea3 subfamily are induced in subpopulations of dorsal root ganglion (DRG) sensory and spinal motor neurons by target-derived factors.
T277 0-3 CD denotes Two
T278 22-29 NNS denotes factors
T279 4-7 NN denotes ETS
T280 8-21 NN denotes transcription
T281 56-63 VBN denotes induced
T282 30-32 IN denotes of
T283 33-36 DT denotes the
T284 42-51 NN denotes subfamily
T285 37-41 NN denotes Pea3
T286 52-55 VBP denotes are
T287 64-66 IN denotes in
T288 67-81 NNS denotes subpopulations
T289 82-84 IN denotes of
T290 85-91 JJ denotes dorsal
T291 97-105 NN denotes ganglion
T292 92-96 NN denotes root
T293 137-144 NNS denotes neurons
T294 106-107 -LRB- denotes (
T295 107-110 NN denotes DRG
T296 110-111 -RRB- denotes )
T297 112-119 JJ denotes sensory
T298 120-123 CC denotes and
T299 124-130 JJ denotes spinal
T300 131-136 NN denotes motor
T301 145-147 IN denotes by
T302 148-154 NN denotes target
T303 155-162 VBN denotes derived
T304 154-155 HYPH denotes -
T305 163-170 NNS denotes factors
T306 170-171 . denotes .
T307 171-277 sentence denotes Their expression controls late aspects of neuronal differentiation such as target invasion and branching.
T308 172-177 PRP$ denotes Their
T309 178-188 NN denotes expression
T310 189-197 VBZ denotes controls
T311 198-202 JJ denotes late
T312 203-210 NNS denotes aspects
T313 211-213 IN denotes of
T314 214-222 JJ denotes neuronal
T315 223-238 NN denotes differentiation
T316 239-243 JJ denotes such
T317 244-246 IN denotes as
T318 247-253 NN denotes target
T319 254-262 NN denotes invasion
T320 263-266 CC denotes and
T321 267-276 NN denotes branching
T322 276-277 . denotes .
T323 277-405 sentence denotes Here, we show that the late onset of ETS gene expression is an essential requirement for normal sensory neuron differentiation.
T324 278-282 RB denotes Here
T325 287-291 VBP denotes show
T326 282-284 , denotes ,
T327 284-286 PRP denotes we
T328 292-296 IN denotes that
T329 335-337 VBZ denotes is
T330 297-300 DT denotes the
T331 306-311 NN denotes onset
T332 301-305 JJ denotes late
T333 312-314 IN denotes of
T334 315-318 NN denotes ETS
T335 319-323 NN denotes gene
T336 324-334 NN denotes expression
T337 338-340 DT denotes an
T338 351-362 NN denotes requirement
T339 341-350 JJ denotes essential
T340 363-366 IN denotes for
T341 367-373 JJ denotes normal
T342 389-404 NN denotes differentiation
T343 374-381 JJ denotes sensory
T344 382-388 NN denotes neuron
T345 404-405 . denotes .
T346 405-628 sentence denotes We provide genetic evidence in the mouse that precocious ETS expression in DRG sensory neurons perturbs axonal projections, the acquisition of terminal differentiation markers, and their dependence on neurotrophic support.
T347 406-408 PRP denotes We
T348 409-416 VBP denotes provide
T349 417-424 JJ denotes genetic
T350 425-433 NN denotes evidence
T351 434-436 IN denotes in
T352 437-440 DT denotes the
T353 441-446 NN denotes mouse
T354 447-451 IN denotes that
T355 501-509 VBZ denotes perturbs
T356 452-462 JJ denotes precocious
T357 467-477 NN denotes expression
T358 463-466 NN denotes ETS
T359 478-480 IN denotes in
T360 481-484 NN denotes DRG
T361 493-500 NNS denotes neurons
T362 485-492 JJ denotes sensory
T363 510-516 JJ denotes axonal
T364 517-528 NNS denotes projections
T365 528-530 , denotes ,
T366 530-533 DT denotes the
T367 534-545 NN denotes acquisition
T368 546-548 IN denotes of
T369 549-557 JJ denotes terminal
T370 574-581 NNS denotes markers
T371 558-573 NN denotes differentiation
T372 581-583 , denotes ,
T373 583-586 CC denotes and
T374 587-592 PRP$ denotes their
T375 593-603 NN denotes dependence
T376 604-606 IN denotes on
T377 607-619 JJ denotes neurotrophic
T378 620-627 NN denotes support
T379 627-628 . denotes .
T380 628-850 sentence denotes Together, our findings indicate that DRG sensory neurons exhibit a temporal developmental switch that can be revealed by distinct responses to ETS transcription factor signaling at sequential steps of neuronal maturation.
T381 629-637 RB denotes Together
T382 652-660 VBP denotes indicate
T383 637-639 , denotes ,
T384 639-642 PRP$ denotes our
T385 643-651 NNS denotes findings
T386 661-665 IN denotes that
T387 686-693 VBP denotes exhibit
T388 666-669 NN denotes DRG
T389 678-685 NNS denotes neurons
T390 670-677 JJ denotes sensory
T391 694-695 DT denotes a
T392 719-725 NN denotes switch
T393 696-704 JJ denotes temporal
T394 705-718 JJ denotes developmental
T395 726-730 WDT denotes that
T396 738-746 VBN denotes revealed
T397 731-734 MD denotes can
T398 735-737 VB denotes be
T399 747-749 IN denotes by
T400 750-758 JJ denotes distinct
T401 759-768 NNS denotes responses
T402 769-771 IN denotes to
T403 772-775 NN denotes ETS
T404 797-806 NN denotes signaling
T405 776-789 NN denotes transcription
T406 790-796 NN denotes factor
T407 807-809 IN denotes at
T408 810-820 JJ denotes sequential
T409 821-826 NNS denotes steps
T410 827-829 IN denotes of
T411 830-838 JJ denotes neuronal
T412 839-849 NN denotes maturation
T413 849-850 . denotes .
R91 T356 T357 amod precocious,expression
R19 T277 T278 nummod Two,factors
R20 T278 T281 nsubjpass factors,induced
R21 T279 T278 compound ETS,factors
R22 T280 T278 compound transcription,factors
R23 T282 T278 prep of,factors
R24 T283 T284 det the,subfamily
R25 T284 T282 pobj subfamily,of
R26 T285 T284 compound Pea3,subfamily
R27 T286 T281 auxpass are,induced
R28 T287 T281 prep in,induced
R29 T288 T287 pobj subpopulations,in
R30 T289 T288 prep of,subpopulations
R31 T290 T291 amod dorsal,ganglion
R32 T291 T293 nmod ganglion,neurons
R33 T292 T291 nmod root,ganglion
R34 T293 T289 pobj neurons,of
R35 T294 T291 punct (,ganglion
R36 T295 T291 appos DRG,ganglion
R37 T296 T291 punct ),ganglion
R38 T297 T293 amod sensory,neurons
R39 T298 T297 cc and,sensory
R40 T299 T300 amod spinal,motor
R41 T300 T297 conj motor,sensory
R42 T301 T281 agent by,induced
R43 T302 T303 npadvmod target,derived
R44 T303 T305 amod derived,factors
R45 T304 T303 punct -,derived
R46 T305 T301 pobj factors,by
R47 T306 T281 punct .,induced
R48 T308 T309 poss Their,expression
R49 T309 T310 nsubj expression,controls
R50 T311 T312 amod late,aspects
R51 T312 T310 dobj aspects,controls
R52 T313 T312 prep of,aspects
R53 T314 T315 amod neuronal,differentiation
R54 T315 T313 pobj differentiation,of
R55 T316 T317 amod such,as
R56 T317 T312 prep as,aspects
R57 T318 T319 compound target,invasion
R58 T319 T317 pobj invasion,as
R59 T320 T319 cc and,invasion
R60 T321 T319 conj branching,invasion
R61 T322 T310 punct .,controls
R62 T324 T325 advmod Here,show
R63 T326 T325 punct ", ",show
R64 T327 T325 nsubj we,show
R65 T328 T329 mark that,is
R66 T329 T325 ccomp is,show
R67 T330 T331 det the,onset
R68 T331 T329 nsubj onset,is
R69 T332 T331 amod late,onset
R70 T333 T331 prep of,onset
R71 T334 T335 compound ETS,gene
R72 T335 T336 compound gene,expression
R73 T336 T333 pobj expression,of
R74 T337 T338 det an,requirement
R75 T338 T329 attr requirement,is
R76 T339 T338 amod essential,requirement
R77 T340 T338 prep for,requirement
R78 T341 T342 amod normal,differentiation
R79 T342 T340 pobj differentiation,for
R80 T343 T344 amod sensory,neuron
R81 T344 T342 compound neuron,differentiation
R82 T345 T325 punct .,show
R83 T347 T348 nsubj We,provide
R84 T349 T350 amod genetic,evidence
R85 T350 T348 dobj evidence,provide
R86 T351 T348 prep in,provide
R87 T352 T353 det the,mouse
R88 T353 T351 pobj mouse,in
R89 T354 T355 mark that,perturbs
R90 T355 T348 ccomp perturbs,provide
R92 T357 T355 nsubj expression,perturbs
R93 T358 T357 compound ETS,expression
R94 T359 T357 prep in,expression
R95 T360 T361 nmod DRG,neurons
R96 T361 T359 pobj neurons,in
R97 T362 T361 amod sensory,neurons
R98 T363 T364 amod axonal,projections
R99 T364 T355 dobj projections,perturbs
R100 T365 T364 punct ", ",projections
R101 T366 T367 det the,acquisition
R102 T367 T364 conj acquisition,projections
R103 T368 T367 prep of,acquisition
R104 T369 T370 amod terminal,markers
R105 T370 T368 pobj markers,of
R106 T371 T370 compound differentiation,markers
R107 T372 T367 punct ", ",acquisition
R108 T373 T367 cc and,acquisition
R109 T374 T375 poss their,dependence
R110 T375 T367 conj dependence,acquisition
R111 T376 T375 prep on,dependence
R112 T377 T378 amod neurotrophic,support
R113 T378 T376 pobj support,on
R114 T379 T348 punct .,provide
R115 T381 T382 advmod Together,indicate
R116 T383 T382 punct ", ",indicate
R117 T384 T385 poss our,findings
R118 T385 T382 nsubj findings,indicate
R119 T386 T387 mark that,exhibit
R120 T387 T382 ccomp exhibit,indicate
R121 T388 T389 nmod DRG,neurons
R122 T389 T387 nsubj neurons,exhibit
R123 T390 T389 amod sensory,neurons
R124 T391 T392 det a,switch
R125 T392 T387 dobj switch,exhibit
R126 T393 T392 amod temporal,switch
R127 T394 T392 amod developmental,switch
R128 T395 T396 dep that,revealed
R129 T396 T392 relcl revealed,switch
R130 T397 T396 aux can,revealed
R131 T398 T396 auxpass be,revealed
R132 T399 T396 agent by,revealed
R133 T400 T401 amod distinct,responses
R134 T401 T399 pobj responses,by
R135 T402 T401 prep to,responses
R136 T403 T404 compound ETS,signaling
R137 T404 T402 pobj signaling,to
R138 T405 T406 compound transcription,factor
R139 T406 T404 compound factor,signaling
R140 T407 T401 prep at,responses
R141 T408 T409 amod sequential,steps
R142 T409 T407 pobj steps,at
R143 T410 T409 prep of,steps
R144 T411 T412 amod neuronal,maturation
R145 T412 T410 pobj maturation,of
R146 T413 T382 punct .,indicate

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T222 37-41 PR_EXT:000007227 denotes Pea3
T223 85-105 UBERON:0000044 denotes dorsal root ganglion
T224 85-105 _FRAGMENT denotes dorsal root ganglion
T225 112-119 _FRAGMENT denotes sensory
T226 137-144 CL:1001451 denotes neurons
T227 107-110 UBERON:0000044 denotes DRG
T228 107-110 _FRAGMENT denotes DRG
T229 112-119 GO_EXT:detection_or_sensing_of_stimulus denotes sensory
T230 124-130 UBERON:0001130 denotes spinal
T231 124-144 CL:0011001 denotes spinal motor neurons
T232 131-136 GO_EXT:biological_movement_or_translocation_process denotes motor
T233 178-188 GO:0010467 denotes expression
T234 189-197 GO:0065007 denotes controls
T235 214-222 CL:0000540 denotes neuronal
T236 223-238 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T237 319-323 SO_EXT:0000704 denotes gene
T238 319-334 GO:0010467 denotes gene expression
T239 374-388 CL:0000101 denotes sensory neuron
T240 389-404 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T241 417-424 SO_EXT:0000704 denotes genetic
T242 441-446 NCBITaxon:10088 denotes mouse
T243 467-477 GO:0010467 denotes expression
T244 481-484 UBERON:0000044 denotes DRG
T245 481-500 CL:1001451 denotes DRG sensory neurons
T246 485-492 GO_EXT:detection_or_sensing_of_stimulus denotes sensory
T247 510-528 GO:0030424 denotes axonal projections
T248 558-573 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T249 574-581 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes markers
T250 607-619 GO_EXT:neuron_development_or_generation denotes neurotrophic
T251 666-669 UBERON:0000044 denotes DRG
T252 666-685 CL:1001451 denotes DRG sensory neurons
T253 670-677 GO_EXT:detection_or_sensing_of_stimulus denotes sensory
T254 759-768 GO_EXT:reaction_or_response denotes responses
T255 776-789 GO_EXT:transcription denotes transcription
T256 776-796 GO_EXT:transcription_factor denotes transcription factor
T257 797-806 GO_EXT:cell_communication_or_signaling_or_signal_transduction denotes signaling
T258 830-838 CL:0000540 denotes neuronal
T259 830-849 GO:0042551 denotes neuronal maturation
T220 8-21 GO_EXT:transcription denotes transcription
T221 8-29 GO_EXT:transcription_factor denotes transcription factors
R4 T225 T224 _lexicallyChainedTo sensory,dorsal root ganglion
R5 T225 T228 _lexicallyChainedTo sensory,DRG
R6 T226 T225 _lexicallyChainedTo neurons,sensory

biosemtest

Id Subject Object Predicate Lexical cue
T41 620-627 UMLS/C1521721 denotes support
T42 189-197 UMLS/C1882979 denotes controls
T43 189-197 UMLS/C1550141 denotes controls
T45 759-768 UMLS/C0871261 denotes responses
T47 719-725 UMLS/C1707719 denotes switch
T48 620-627 UMLS/C0183683 denotes support
T49 367-373 UMLS/C1551394 denotes normal
T50 696-704 UMLS/C0205374 denotes temporal
T51 549-557 UMLS/C0205088 denotes terminal
T52 686-693 UMLS/C0015272 denotes exhibit
T53 425-433 UMLS/C0332120 denotes evidence
T54 839-849 UMLS/C1254042 denotes maturation
T55 198-202 UMLS/C0205087 denotes late
T56 301-305 UMLS/C0205087 denotes late
T57 367-373 UMLS/C1550457 denotes normal
T59 107-110 UMLS/C1414151 denotes DRG
T60 481-484 UMLS/C1414151 denotes DRG
T61 666-669 UMLS/C1414151 denotes DRG
T62 267-276 UMLS/C0205384 denotes branching
T63 409-416 UMLS/C0359589 denotes provide
T65 769-771 UMLS/C0319022 denotes to
T66 367-373 UMLS/C1704701 denotes normal
T68 4-7 UMLS/C0812380 denotes ETS
T69 315-318 UMLS/C0812380 denotes ETS
T70 463-466 UMLS/C0812380 denotes ETS
T71 772-775 UMLS/C0812380 denotes ETS
T72 112-119 UMLS/C0445254 denotes sensory
T73 417-424 UMLS/C0314603 denotes genetic
T74 696-704 UMLS/C2362314 denotes temporal
T76 107-110 UMLS/C1537672 denotes DRG
T77 481-484 UMLS/C1537672 denotes DRG
T78 666-669 UMLS/C1537672 denotes DRG
T79 367-373 UMLS/C1873497 denotes normal
T80 810-820 UMLS/C1705294 denotes sequential
T81 203-210 UMLS/C1879746 denotes aspects
T82 821-826 UMLS/C0454366 denotes steps
T83 189-197 UMLS/C1547100 denotes controls
T84 549-557 UMLS/C1705314 denotes terminal
T85 549-557 UMLS/C1705315 denotes terminal
T86 306-311 UMLS/C0332162 denotes onset
T87 67-81 UMLS/C1257890 denotes subpopulations
T88 214-238 UMLS/C1518294 denotes neuronal differentiation
T89 306-311 UMLS/C1299997 denotes onset
T90 267-276 UMLS/C1706131 denotes branching
T91 42-51 UMLS/C1711207 denotes subfamily
T92 593-606 UMLS/C0439857 denotes dependence on
T93 731-734 UMLS/C0006823 denotes can
T95 759-768 UMLS/C1704632 denotes responses
T96 821-826 UMLS/C1705117 denotes steps
T97 652-660 UMLS/C1444656 denotes indicate
T99 797-806 UMLS/C0037083 denotes signaling
T100 131-144 UMLS/C0026609 denotes motor neurons
T102 8-29 UMLS/C0040648 denotes transcription factors
T103 776-796 UMLS/C0040648 denotes transcription factor
T104 267-276 UMLS/C1253959 denotes branching
T105 0-3 UMLS/C0205448 denotes Two
T106 821-826 UMLS/C1704379 denotes steps
T108 759-768 UMLS/C1706817 denotes responses
T109 731-734 UMLS/C0344312 denotes can
T110 85-105 UMLS/C1761610 denotes dorsal root ganglion
T111 178-188 UMLS/C0017262 denotes expression
T112 319-334 UMLS/C0017262 denotes gene expression
T113 467-477 UMLS/C0017262 denotes expression
T114 351-362 UMLS/C1514873 denotes requirement
T115 189-197 UMLS/C0243148 denotes controls
T116 367-373 UMLS/C0439166 denotes normal
T117 198-202 UMLS/C1279941 denotes late
T118 301-305 UMLS/C1279941 denotes late
T119 821-826 UMLS/C1261552 denotes steps
T120 452-462 UMLS/C1279930 denotes precocious
T121 155-162 UMLS/C2348040 denotes derived
T122 189-197 UMLS/C0009932 denotes controls
T123 341-350 UMLS/C0205224 denotes essential
T124 629-637 UMLS/C1883357 denotes Together
T125 203-210 UMLS/C1547011 denotes aspects
T127 4-7 UMLS/C1705691 denotes ETS
T128 315-318 UMLS/C1705691 denotes ETS
T129 463-466 UMLS/C1705691 denotes ETS
T130 772-775 UMLS/C1705691 denotes ETS
T131 517-528 UMLS/C0348018 denotes projections
T132 203-210 UMLS/C0700364 denotes aspects
T133 254-262 UMLS/C1269955 denotes invasion
T134 367-373 UMLS/C2347086 denotes normal
T135 148-154 UMLS/C1521840 denotes target
T136 247-253 UMLS/C1521840 denotes target
T137 267-276 UMLS/C2700383 denotes branching
T138 738-746 UMLS/C0443289 denotes revealed
T139 267-276 UMLS/C2700384 denotes branching
T140 124-130 UMLS/C0521329 denotes spinal
T142 797-806 UMLS/C1710082 denotes signaling
T144 705-718 UMLS/C0678723 denotes developmental
T145 56-63 UMLS/C0205263 denotes induced
T146 148-154 UMLS/C0599894 denotes target
T147 247-253 UMLS/C0599894 denotes target
T148 830-838 UMLS/C0521390 denotes neuronal
T149 189-197 UMLS/C0332298 denotes controls
T150 254-262 UMLS/C2699153 denotes invasion
T151 517-528 UMLS/C0033363 denotes projections
T152 620-627 UMLS/C0344211 denotes support
T153 155-162 UMLS/C1711343 denotes derived
T154 382-404 UMLS/C1159970 denotes neuron differentiation
T155 810-820 UMLS/C1548958 denotes sequential
T156 620-627 UMLS/C1317973 denotes support
T157 155-162 UMLS/C1441547 denotes derived
T158 534-545 UMLS/C1706701 denotes acquisition
T159 178-188 UMLS/C0185117 denotes expression
T160 467-477 UMLS/C0185117 denotes expression
T162 705-718 UMLS/C0458003 denotes developmental
T163 267-276 UMLS/C1881507 denotes branching
T164 367-373 UMLS/C0205307 denotes normal
T166 4-7 UMLS/C0813971 denotes ETS
T167 315-318 UMLS/C0813971 denotes ETS
T168 463-466 UMLS/C0813971 denotes ETS
T169 772-775 UMLS/C0813971 denotes ETS
T170 643-651 UMLS/C2607943 denotes findings
T171 374-388 UMLS/C0034837 denotes sensory neuron
T172 485-500 UMLS/C0034837 denotes sensory neurons
T173 670-685 UMLS/C0034837 denotes sensory neurons
T174 558-581 UMLS/C0003324 denotes differentiation markers
T175 517-528 UMLS/C0016538 denotes projections
T176 85-105 UMLS/C0017070 denotes dorsal root ganglion
T177 696-704 UMLS/C0442043 denotes temporal
T179 107-110 UMLS/C0011928 denotes DRG
T180 481-484 UMLS/C0011928 denotes DRG
T181 666-669 UMLS/C0011928 denotes DRG
T182 189-197 UMLS/C2587213 denotes controls
T183 374-388 UMLS/C0027883 denotes sensory neuron
T184 485-500 UMLS/C0027883 denotes sensory neurons
T185 670-685 UMLS/C0027883 denotes sensory neurons

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T189 37-41 PR:000007227 denotes Pea3
T190 85-105 UBERON:0000044 denotes dorsal root ganglion
T191 85-105 _FRAGMENT denotes dorsal root ganglion
T192 112-119 _FRAGMENT denotes sensory
T193 137-144 CL:1001451 denotes neurons
T194 107-110 UBERON:0000044 denotes DRG
T195 107-110 _FRAGMENT denotes DRG
T196 124-130 UBERON:0001130 denotes spinal
T197 124-144 CL:0011001 denotes spinal motor neurons
T198 178-188 GO:0010467 denotes expression
T199 189-197 GO:0065007 denotes controls
T200 214-222 CL:0000540 denotes neuronal
T201 319-323 SO:0000704 denotes gene
T202 319-334 GO:0010467 denotes gene expression
T203 374-388 CL:0000101 denotes sensory neuron
T204 417-424 SO:0000704 denotes genetic
T205 441-446 NCBITaxon:10088 denotes mouse
T206 467-477 GO:0010467 denotes expression
T207 481-484 UBERON:0000044 denotes DRG
T208 481-500 CL:1001451 denotes DRG sensory neurons
T209 510-528 GO:0030424 denotes axonal projections
T210 666-669 UBERON:0000044 denotes DRG
T211 666-685 CL:1001451 denotes DRG sensory neurons
T212 830-838 CL:0000540 denotes neuronal
T213 830-849 GO:0042551 denotes neuronal maturation
R2 T192 T195 _lexicallyChainedTo sensory,DRG
R3 T193 T192 _lexicallyChainedTo neurons,sensory
R1 T192 T191 _lexicallyChainedTo sensory,dorsal root ganglion