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PMC:1084331 / 11794-12145 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T4381 0-351 sentence denotes Together, these findings suggest that in the absence of Er81, EWS-Pea3 can direct the complex biological process of correct laminar termination within the ventral spinal cord and the formation of synapses with motor neurons (Figure 2J–2L), thus identifying an ETS transcription factor suitable for heterochronic expression experiments in DRG neurons.
T4382 1-9 RB denotes Together
T4383 26-33 VBP denotes suggest
T4384 9-11 , denotes ,
T4385 11-16 DT denotes these
T4386 17-25 NNS denotes findings
T4387 34-38 IN denotes that
T4388 76-82 VB denotes direct
T4389 39-41 IN denotes in
T4390 42-45 DT denotes the
T4391 46-53 NN denotes absence
T4392 54-56 IN denotes of
T4393 57-61 NN denotes Er81
T4394 61-63 , denotes ,
T4395 63-66 NN denotes EWS
T4396 67-71 NN denotes Pea3
T4397 66-67 HYPH denotes -
T4398 72-75 MD denotes can
T4399 83-86 DT denotes the
T4400 106-113 NN denotes process
T4401 87-94 JJ denotes complex
T4402 95-105 JJ denotes biological
T4403 114-116 IN denotes of
T4404 117-124 JJ denotes correct
T4405 133-144 NN denotes termination
T4406 125-132 JJ denotes laminar
T4407 145-151 IN denotes within
T4408 152-155 DT denotes the
T4409 171-175 NN denotes cord
T4410 156-163 JJ denotes ventral
T4411 164-170 JJ denotes spinal
T4412 176-179 CC denotes and
T4413 180-183 DT denotes the
T4414 184-193 NN denotes formation
T4415 194-196 IN denotes of
T4416 197-205 NNS denotes synapses
T4417 206-210 IN denotes with
T4418 211-216 NN denotes motor
T4419 217-224 NNS denotes neurons
T4420 225-226 -LRB- denotes (
T4421 233-235 NN denotes 2J
T4422 226-232 NN denotes Figure
T4423 235-236 SYM denotes –
T4424 236-238 NN denotes 2L
T4425 238-239 -RRB- denotes )
T4426 239-241 , denotes ,
T4427 241-245 RB denotes thus
T4428 246-257 VBG denotes identifying
T4429 258-260 DT denotes an
T4430 279-285 NN denotes factor
T4431 261-264 NN denotes ETS
T4432 265-278 NN denotes transcription
T4433 286-294 JJ denotes suitable
T4434 295-298 IN denotes for
T4435 299-312 JJ denotes heterochronic
T4436 324-335 NNS denotes experiments
T4437 313-323 NN denotes expression
T4438 336-338 IN denotes in
T4439 339-342 NN denotes DRG
T4440 343-350 NNS denotes neurons
T4441 350-351 . denotes .
R1688 T4382 T4383 advmod Together,suggest
R1690 T4384 T4383 punct ", ",suggest
R1693 T4385 T4386 det these,findings
R1694 T4386 T4383 nsubj findings,suggest
R1696 T4387 T4388 mark that,direct
R1697 T4388 T4383 ccomp direct,suggest
R1698 T4389 T4388 prep in,direct
R1700 T4390 T4391 det the,absence
R1701 T4391 T4389 pobj absence,in
R1702 T4392 T4391 prep of,absence
R1703 T4393 T4392 pobj Er81,of
R1708 T4394 T4388 punct ", ",direct
R1710 T4395 T4396 compound EWS,Pea3
R1711 T4396 T4388 nsubj Pea3,direct
R1713 T4397 T4396 punct -,Pea3
R1714 T4398 T4388 aux can,direct
R1716 T4399 T4400 det the,process
R1717 T4400 T4388 dobj process,direct
R1718 T4401 T4400 amod complex,process
R1720 T4402 T4400 amod biological,process
R1721 T4403 T4400 prep of,process
R1722 T4404 T4405 amod correct,termination
R1723 T4405 T4403 pobj termination,of
R1724 T4406 T4405 amod laminar,termination
R1725 T4407 T4405 prep within,termination
R1727 T4408 T4409 det the,cord
R1728 T4409 T4407 pobj cord,within
R1729 T4410 T4409 amod ventral,cord
R1731 T4411 T4409 amod spinal,cord
R1732 T4412 T4400 cc and,process
R1733 T4413 T4414 det the,formation
R1735 T4414 T4400 conj formation,process
R1736 T4415 T4414 prep of,formation
R1737 T4416 T4415 pobj synapses,of
R1739 T4417 T4416 prep with,synapses
R1740 T4418 T4419 compound motor,neurons
R1742 T4419 T4417 pobj neurons,with
R1743 T4420 T4421 punct (,2J
R1745 T4421 T4388 parataxis 2J,direct
R1746 T4422 T4421 compound Figure,2J
R1747 T4423 T4424 punct –,2L
R1749 T4424 T4421 prep 2L,2J
R1750 T4425 T4421 punct ),2J
R1751 T4426 T4388 punct ", ",direct
R1753 T4427 T4428 advmod thus,identifying
R1754 T4428 T4388 advcl identifying,direct
R1755 T4429 T4430 det an,factor
R1757 T4430 T4428 dobj factor,identifying
R1758 T4431 T4430 compound ETS,factor
R1760 T4432 T4430 compound transcription,factor
R1761 T4433 T4430 amod suitable,factor
R1762 T4434 T4433 prep for,suitable
R1764 T4435 T4436 amod heterochronic,experiments
R1765 T4436 T4434 pobj experiments,for
R1766 T4437 T4436 compound expression,experiments
R1768 T4438 T4436 prep in,experiments
R1769 T4439 T4440 compound DRG,neurons
R1770 T4440 T4438 pobj neurons,in
R1772 T4441 T4383 punct .,suggest

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3592 57-61 PR_EXT:000007223 denotes Er81
T3593 63-66 PR_EXT:000007243 denotes EWS
T3594 67-71 PR_EXT:000007227 denotes Pea3
T3595 76-82 GO_EXT:biological_direction_or_guidance denotes direct
T3596 95-105 CHEBI_GO_EXT:biological_process_or_quality_or_role denotes biological
T3597 95-113 GO:0008150 denotes biological process
T3598 125-132 UBERON:0000957 denotes laminar
T3599 156-175 UBERON:0002257 denotes ventral spinal cord
T3600 184-205 GO:0007416 denotes formation of synapses
T3601 197-205 GO:0045202 denotes synapses
T3602 211-216 GO_EXT:biological_movement_or_translocation_process denotes motor
T3603 211-224 CL:0000100 denotes motor neurons
T3604 265-278 GO_EXT:transcription denotes transcription
T3605 265-285 GO_EXT:transcription_factor denotes transcription factor
T3606 313-323 GO:0010467 denotes expression
T3607 339-342 UBERON:0000044 denotes DRG
T3608 343-350 CL:0000540 denotes neurons

biosemtest

Id Subject Object Predicate Lexical cue
T2793 159-170 UMLS/C1692758 denotes tral spinal
T2798 27-35 UMLS/C1883357 denotes uggest t
T2803 274-285 UMLS/C1550043 denotes tion factor
T2820 121-139 UMLS/C0277784 denotes ect laminar termin
T2866 190-201 UMLS/C0037925 denotes ion of syna
T2869 190-201 UMLS/C0037928 denotes ion of syna
T2879 274-285 UMLS/C0205396 denotes tion factor
T2888 210-219 UMLS/C1522492 denotes motor ne
T2896 98-101 UMLS/C0006823 denotes log
T2897 72-79 UMLS/C1689985 denotes can dir
T2910 210-219 UMLS/C0439634 denotes motor ne
T2916 143-150 UMLS/C0205202 denotes n withi
T2953 151-158 UMLS/C0205274 denotes the ve
T2972 121-139 UMLS/C0031845 denotes ect laminar termin
T2991 274-285 UMLS/C1551388 denotes tion factor
T3006 52-59 UMLS/C1705535 denotes e of Er
T3010 289-292 UMLS/C0812380 denotes tab
T3019 143-150 UMLS/C0205170 denotes n withi
T3022 102-108 UMLS/C1947931 denotes cal pr
T3024 102-108 UMLS/C0439851 denotes cal pr
T3025 72-79 UMLS/C0424530 denotes can dir
T3031 113-120 UMLS/C0439855 denotes of cor
T3036 237-250 UMLS/C0026609 denotes L), thus iden
T3039 293-313 UMLS/C0040648 denotes e for heterochronic
T3041 72-79 UMLS/C0332197 denotes can dir
T3050 102-108 UMLS/C1552596 denotes cal pr
T3074 289-292 UMLS/C1705691 denotes tab
T3091 210-219 UMLS/C0220781 denotes motor ne
T3102 43-51 UMLS/C2607943 denotes he absen
T3126 190-201 UMLS/C1278836 denotes ion of syna
T3128 15-17 UMLS/C0456691 denotes e
T3136 182-189 UMLS/C1704448 denotes e forma
T3147 159-170 UMLS/C1549081 denotes tral spinal
T3160 223-231 UMLS/C0039062 denotes s (Figur
T3173 98-101 UMLS/C0344312 denotes log
T3186 113-120 UMLS/C1704241 denotes of cor
T3210 143-150 UMLS/C2349182 denotes n withi
T3218 289-292 UMLS/C0813971 denotes tab

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3378 57-61 PR:000007223 denotes Er81
T3379 63-66 PR:000007243 denotes EWS
T3380 67-71 PR:000007227 denotes Pea3
T3381 95-113 GO:0008150 denotes biological process
T3382 125-132 UBERON:0000957 denotes laminar
T3383 156-175 UBERON:0002257 denotes ventral spinal cord
T3384 184-205 GO:0007416 denotes formation of synapses
T3385 197-205 GO:0045202 denotes synapses
T3386 211-224 CL:0000100 denotes motor neurons
T3387 313-323 GO:0010467 denotes expression
T3388 339-342 UBERON:0000044 denotes DRG
T3389 343-350 CL:0000540 denotes neurons