PMC:1064895 / 941-1099 JSONTXT

{"project":"test3","denotations":[{"id":"T148","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T147","span":{"begin":109,"end":127},"obj":"Protein"},{"id":"T146","span":{"begin":103,"end":107},"obj":"Protein"},{"id":"T105","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T104","span":{"begin":109,"end":127},"obj":"Protein"},{"id":"T103","span":{"begin":103,"end":107},"obj":"Protein"}],"relations":[{"id":"R40","pred":"equivalentTo","subj":"T148","obj":"T147"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T1293","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T1292","span":{"begin":109,"end":127},"obj":"Protein"},{"id":"T1291","span":{"begin":103,"end":107},"obj":"Protein"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"BioNLP16_DUT","denotations":[{"id":"T1997","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T1996","span":{"begin":109,"end":127},"obj":"Protein"},{"id":"T1995","span":{"begin":103,"end":107},"obj":"Protein"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"biosemtest","denotations":[{"id":"T513","span":{"begin":71,"end":77},"obj":"UMLS/C1551364"},{"id":"T507","span":{"begin":78,"end":87},"obj":"UMLS/C0332257"},{"id":"T493","span":{"begin":129,"end":132},"obj":"UMLS/C0031858"},{"id":"T492","span":{"begin":109,"end":127},"obj":"UMLS/C0031858"},{"id":"T488","span":{"begin":31,"end":40},"obj":"UMLS/C1881713"},{"id":"T487","span":{"begin":31,"end":40},"obj":"UMLS/C0443299"},{"id":"T485","span":{"begin":0,"end":8},"obj":"UMLS/C1705908"},{"id":"T482","span":{"begin":78,"end":87},"obj":"UMLS/C2700399"},{"id":"T465","span":{"begin":71,"end":77},"obj":"UMLS/C1521826"},{"id":"T435","span":{"begin":0,"end":8},"obj":"UMLS/C1550655"},{"id":"T426","span":{"begin":78,"end":87},"obj":"UMLS/C1552866"},{"id":"T383","span":{"begin":71,"end":77},"obj":"UMLS/C1254351"},{"id":"T376","span":{"begin":129,"end":132},"obj":"UMLS/C0030779"},{"id":"T277","span":{"begin":0,"end":8},"obj":"UMLS/C1578479"},{"id":"T265","span":{"begin":0,"end":8},"obj":"UMLS/C1578483"},{"id":"T262","span":{"begin":0,"end":8},"obj":"UMLS/C1578480"},{"id":"T259","span":{"begin":0,"end":8},"obj":"UMLS/C1578481"},{"id":"T255","span":{"begin":0,"end":8},"obj":"UMLS/C1578486"},{"id":"T251","span":{"begin":0,"end":8},"obj":"UMLS/C1578484"},{"id":"T246","span":{"begin":0,"end":8},"obj":"UMLS/C1578485"},{"id":"T233","span":{"begin":31,"end":40},"obj":"UMLS/C0086972"},{"id":"T194","span":{"begin":146,"end":158},"obj":"UMLS/C0333348"},{"id":"T319","span":{"begin":47,"end":57},"obj":"UMLS/C1948023"},{"id":"T293","span":{"begin":0,"end":8},"obj":"UMLS/C0030705"},{"id":"T286","span":{"begin":71,"end":77},"obj":"UMLS/C0450442"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"pmc-enju-pas","denotations":[{"id":"T831","span":{"begin":146,"end":158},"obj":"JJ"},{"id":"T830","span":{"begin":138,"end":145},"obj":"JJ"},{"id":"T829","span":{"begin":134,"end":137},"obj":"CC"},{"id":"T828","span":{"begin":132,"end":133},"obj":"-RRB-"},{"id":"T827","span":{"begin":129,"end":132},"obj":"NN"},{"id":"T826","span":{"begin":128,"end":129},"obj":"-LRB-"},{"id":"T825","span":{"begin":109,"end":127},"obj":"NN"},{"id":"T824","span":{"begin":107,"end":108},"obj":"-COMMA-"},{"id":"T823","span":{"begin":98,"end":107},"obj":"NN"},{"id":"T822","span":{"begin":96,"end":97},"obj":"-COMMA-"},{"id":"T821","span":{"begin":88,"end":96},"obj":"NN"},{"id":"T820","span":{"begin":78,"end":87},"obj":"VB"},{"id":"T819","span":{"begin":71,"end":77},"obj":"NN"},{"id":"T818","span":{"begin":63,"end":70},"obj":"JJ"},{"id":"T817","span":{"begin":58,"end":62},"obj":"IN"},{"id":"T816","span":{"begin":47,"end":57},"obj":"VB"},{"id":"T815","span":{"begin":42,"end":46},"obj":"RB"},{"id":"T814","span":{"begin":40,"end":41},"obj":"-COMMA-"},{"id":"T813","span":{"begin":31,"end":40},"obj":"VB"},{"id":"T812","span":{"begin":26,"end":30},"obj":"VB"},{"id":"T811","span":{"begin":24,"end":25},"obj":"-RRB-"},{"id":"T810","span":{"begin":22,"end":24},"obj":"CD"},{"id":"T809","span":{"begin":20,"end":21},"obj":"SYM"},{"id":"T808","span":{"begin":18,"end":19},"obj":"NN"},{"id":"T807","span":{"begin":17,"end":18},"obj":"-LRB-"},{"id":"T806","span":{"begin":14,"end":16},"obj":"NN"},{"id":"T805","span":{"begin":9,"end":13},"obj":"IN"},{"id":"T804","span":{"begin":0,"end":8},"obj":"NN"}],"relations":[{"id":"R255","pred":"arg1Of","subj":"T804","obj":"T805"},{"id":"R256","pred":"arg2Of","subj":"T806","obj":"T805"},{"id":"R257","pred":"arg1Of","subj":"T806","obj":"T807"},{"id":"R258","pred":"arg2Of","subj":"T808","obj":"T807"},{"id":"R259","pred":"arg1Of","subj":"T808","obj":"T809"},{"id":"R260","pred":"arg1Of","subj":"T809","obj":"T810"},{"id":"R261","pred":"arg3Of","subj":"T811","obj":"T807"},{"id":"R262","pred":"arg1Of","subj":"T813","obj":"T814"},{"id":"R263","pred":"arg2Of","subj":"T814","obj":"T812"},{"id":"R264","pred":"arg2Of","subj":"T816","obj":"T814"},{"id":"R265","pred":"arg1Of","subj":"T816","obj":"T815"},{"id":"R266","pred":"arg1Of","subj":"T816","obj":"T817"},{"id":"R267","pred":"arg2Of","subj":"T819","obj":"T817"},{"id":"R268","pred":"arg1Of","subj":"T819","obj":"T818"},{"id":"R269","pred":"arg1Of","subj":"T819","obj":"T820"},{"id":"R270","pred":"arg1Of","subj":"T821","obj":"T822"},{"id":"R271","pred":"arg1Of","subj":"T822","obj":"T824"},{"id":"R272","pred":"arg2Of","subj":"T823","obj":"T822"},{"id":"R273","pred":"arg1Of","subj":"T824","obj":"T829"},{"id":"R274","pred":"arg2Of","subj":"T825","obj":"T824"},{"id":"R275","pred":"arg1Of","subj":"T825","obj":"T826"},{"id":"R276","pred":"arg2Of","subj":"T827","obj":"T826"},{"id":"R277","pred":"arg3Of","subj":"T828","obj":"T826"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T1045","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T1044","span":{"begin":109,"end":127},"obj":"Protein"},{"id":"T1043","span":{"begin":103,"end":107},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1271","span":{"begin":93,"end":96},"obj":"http://www.uniprot.org/uniprot/P07766"},{"id":"T1268","span":{"begin":93,"end":96},"obj":"http://www.uniprot.org/uniprot/P04234"},{"id":"T1265","span":{"begin":93,"end":96},"obj":"http://www.uniprot.org/uniprot/P20963"},{"id":"T1274","span":{"begin":93,"end":96},"obj":"http://www.uniprot.org/uniprot/P09693"},{"id":"T1277","span":{"begin":103,"end":107},"obj":"http://www.uniprot.org/uniprot/P10747"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"simple1","denotations":[{"id":"T1228","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T1227","span":{"begin":109,"end":127},"obj":"Protein"},{"id":"T1226","span":{"begin":103,"end":107},"obj":"Protein"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"DLUT931","denotations":[{"id":"T1348","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T1347","span":{"begin":109,"end":127},"obj":"Protein"},{"id":"T1346","span":{"begin":103,"end":107},"obj":"Protein"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T1966","span":{"begin":98,"end":107},"obj":"Protein"},{"id":"T1965","span":{"begin":18,"end":21},"obj":"Entity"},{"id":"T1957","span":{"begin":109,"end":133},"obj":"Protein"},{"id":"T1916","span":{"begin":88,"end":108},"obj":"Protein"},{"id":"T1905","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T1901","span":{"begin":14,"end":16},"obj":"Protein"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1617","span":{"begin":146,"end":158},"obj":"JJ"},{"id":"T1616","span":{"begin":138,"end":145},"obj":"JJ"},{"id":"T1615","span":{"begin":134,"end":137},"obj":"CC"},{"id":"T1614","span":{"begin":132,"end":133},"obj":"-RRB-"},{"id":"T1613","span":{"begin":129,"end":132},"obj":"NNP"},{"id":"T1612","span":{"begin":128,"end":129},"obj":"-LRB-"},{"id":"T1611","span":{"begin":109,"end":127},"obj":"NN"},{"id":"T1610","span":{"begin":107,"end":108},"obj":","},{"id":"T1609","span":{"begin":98,"end":107},"obj":"JJ"},{"id":"T1608","span":{"begin":96,"end":97},"obj":","},{"id":"T1607","span":{"begin":88,"end":96},"obj":"JJ"},{"id":"T1606","span":{"begin":78,"end":87},"obj":"VBG"},{"id":"T1605","span":{"begin":71,"end":77},"obj":"NNS"},{"id":"T1604","span":{"begin":63,"end":70},"obj":"JJ"},{"id":"T1603","span":{"begin":58,"end":62},"obj":"IN"},{"id":"T1602","span":{"begin":47,"end":57},"obj":"VBN"},{"id":"T1601","span":{"begin":42,"end":46},"obj":"RB"},{"id":"T1600","span":{"begin":40,"end":41},"obj":","},{"id":"T1599","span":{"begin":31,"end":40},"obj":"VBN"},{"id":"T1598","span":{"begin":26,"end":30},"obj":"VBD"},{"id":"T1597","span":{"begin":24,"end":25},"obj":"-RRB-"},{"id":"T1596","span":{"begin":22,"end":24},"obj":"CD"},{"id":"T1595","span":{"begin":20,"end":21},"obj":"SYM"},{"id":"T1594","span":{"begin":18,"end":19},"obj":"FW"},{"id":"T1593","span":{"begin":17,"end":18},"obj":"-LRB-"},{"id":"T1592","span":{"begin":14,"end":16},"obj":"NNP"},{"id":"T1591","span":{"begin":9,"end":13},"obj":"IN"},{"id":"T1590","span":{"begin":0,"end":8},"obj":"NNS"}],"relations":[{"id":"R745","pred":"pobj","subj":"T1592","obj":"T1591"},{"id":"R746","pred":"punct","subj":"T1593","obj":"T1592"},{"id":"R747","pred":"nmod","subj":"T1594","obj":"T1596"},{"id":"R748","pred":"punct","subj":"T1595","obj":"T1596"},{"id":"R749","pred":"appos","subj":"T1596","obj":"T1592"},{"id":"R750","pred":"punct","subj":"T1597","obj":"T1592"},{"id":"R751","pred":"auxpass","subj":"T1598","obj":"T1599"},{"id":"R752","pred":"ROOT","subj":"T1599","obj":"T1599"},{"id":"R753","pred":"punct","subj":"T1600","obj":"T1599"},{"id":"R754","pred":"advmod","subj":"T1601","obj":"T1602"},{"id":"R755","pred":"conj","subj":"T1602","obj":"T1599"},{"id":"R756","pred":"prep","subj":"T1603","obj":"T1602"},{"id":"R757","pred":"amod","subj":"T1604","obj":"T1605"},{"id":"R758","pred":"pobj","subj":"T1605","obj":"T1603"},{"id":"R759","pred":"prep","subj":"T1606","obj":"T1605"},{"id":"R761","pred":"punct","subj":"T1608","obj":"T1607"},{"id":"R762","pred":"conj","subj":"T1609","obj":"T1607"},{"id":"R763","pred":"punct","subj":"T1610","obj":"T1607"},{"id":"R764","pred":"conj","subj":"T1611","obj":"T1607"},{"id":"R765","pred":"punct","subj":"T1612","obj":"T1611"},{"id":"R766","pred":"appos","subj":"T1613","obj":"T1611"},{"id":"R767","pred":"punct","subj":"T1614","obj":"T1611"},{"id":"R768","pred":"cc","subj":"T1615","obj":"T1611"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1164","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T1163","span":{"begin":109,"end":127},"obj":"Protein"},{"id":"T1162","span":{"begin":98,"end":107},"obj":"Protein"},{"id":"T1161","span":{"begin":88,"end":96},"obj":"Protein"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}

{"project":"testone","denotations":[{"id":"T48","span":{"begin":129,"end":132},"obj":"Protein"},{"id":"T47","span":{"begin":109,"end":127},"obj":"Protein"},{"id":"T46","span":{"begin":103,"end":107},"obj":"Protein"}],"relations":[{"id":"R6","pred":"equivalentTo","subj":"T48","obj":"T47"}],"text":"patients with RA (n = 24) were separated, then stimulated with various agents including anti-CD3, anti-CD28, phytohemagglutinin (PHA) and several inflammatory"}