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PMC:1064895 / 4981-5325 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T2227 164-169 Protein denotes IL-17
T2226 29-34 Protein denotes IL-17
T2184 260-265 Protein denotes IL-17
T2183 164-169 Protein denotes IL-17
T2182 29-34 Protein denotes IL-17
T2230 266-276 Gene_expression denotes production
T2229 260-265 Protein denotes IL-17
T2228 170-180 Gene_expression denotes production
R1108 T2227 T2228 themeOf IL-17,production
R1109 T2229 T2230 themeOf IL-17,production

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T3759 266-276 Gene_expression denotes production
T3758 170-180 Gene_expression denotes production
T3743 260-265 Protein denotes IL-17
T3742 164-169 Protein denotes IL-17
T3741 29-34 Protein denotes IL-17
R1801 T3742 T3758 themeOf IL-17,production
R1805 T3743 T3759 themeOf IL-17,production

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4647 266-276 Gene_expression denotes production
T4646 170-180 Gene_expression denotes production
T4632 260-265 Protein denotes IL-17
T4631 164-169 Protein denotes IL-17
T4630 29-34 Protein denotes IL-17
R2475 T4631 T4646 themeOf IL-17,production
R2476 T4632 T4647 themeOf IL-17,production

2_test

Id Subject Object Predicate Lexical cue
15642134-10323452-4202020 103-105 10323452 denotes 12
15642134-12677240-4202021 106-108 12677240 denotes 15
15642134-15022319-4202022 109-111 15022319 denotes 16

biosemtest

Id Subject Object Predicate Lexical cue
T2744 187-194 UMLS/C1527428 denotes s uncer
T2743 213-220 UMLS/C0449450 denotes t study
T2731 35-40 UMLS/C1825592 denotes in jo
T2722 221-226 UMLS/C1705923 denotes we us
T2721 100-107 UMLS/C1705923 denotes s [12,1
T2710 266-282 UMLS/C1819444 denotes production in PB
T2709 170-186 UMLS/C1819444 denotes production remai
T2696 19-31 UMLS/C1880177 denotes bution of IL
T2686 286-290 UMLS/C1321301 denotes f pa
T2660 294-302 UMLS/C1705908 denotes ts with
T2608 92-99 UMLS/C1279919 denotes r studi
T2606 78-88 UMLS/C1301746 denotes nted in ea
T2591 294-302 UMLS/C1550655 denotes ts with
T2563 78-88 UMLS/C1547673 denotes nted in ea
T2560 213-220 UMLS/C0150312 denotes t study
T2553 221-226 UMLS/C0557651 denotes we us
T2552 100-107 UMLS/C0557651 denotes s [12,1
T2540 69-72 UMLS/C2348947 denotes en
T2487 254-265 UMLS/C1292732 denotes igate IL-17
T2456 221-226 UMLS/C0008972 denotes we us
T2455 100-107 UMLS/C0008972 denotes s [12,1
T2451 221-226 UMLS/C0008976 denotes we us
T2450 100-107 UMLS/C0008976 denotes s [12,1
T2445 44-62 UMLS/C0003864 denotes inflammation in RA
T2425 78-88 UMLS/C1548385 denotes nted in ea
T2424 221-226 UMLS/C2603343 denotes we us
T2423 100-107 UMLS/C2603343 denotes s [12,1
T2409 221-226 UMLS/C2349977 denotes we us
T2408 100-107 UMLS/C2349977 denotes s [12,1
T2393 35-40 UMLS/C1522571 denotes in jo
T2388 294-302 UMLS/C0030705 denotes ts with
T2374 124-137 UMLS/C0175996 denotes ellular signa
T2370 35-40 UMLS/C0384648 denotes in jo
T2365 294-302 UMLS/C1578479 denotes ts with
T2357 294-302 UMLS/C1578483 denotes ts with
T2354 294-302 UMLS/C1578480 denotes ts with
T2351 294-302 UMLS/C1578481 denotes ts with
T2348 294-302 UMLS/C1578486 denotes ts with
T2344 294-302 UMLS/C1578484 denotes ts with
T2340 294-302 UMLS/C1578485 denotes ts with
T2321 138-165 UMLS/C0086982 denotes transduction pathway for I
T2310 35-40 UMLS/C1623218 denotes in jo
T2303 221-226 UMLS/C1880229 denotes we us
T2302 100-107 UMLS/C1880229 denotes s [12,1
T2287 243-250 UMLS/C0234402 denotes i to in
T2278 251-253 UMLS/C0319022 denotes es
T2530 124-137 UMLS/C0178719 denotes ellular signa
T2504 78-88 UMLS/C1301725 denotes nted in ea
T2500 78-88 UMLS/C1609436 denotes nted in ea
T2496 195-204 UMLS/C0087130 denotes ain. In t
T2259 78-88 UMLS/C1563337 denotes nted in ea
T2257 221-226 UMLS/C0947630 denotes we us
T2256 100-107 UMLS/C0947630 denotes s [12,1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3411 336-343 NN denotes pathway
T3410 323-335 NN denotes transduction
T3409 313-322 NN denotes signaling
T3408 309-312 PRP-DOLLAR- denotes its
T3407 305-308 CC denotes and
T3406 302-304 NN denotes RA
T3405 297-301 IN denotes with
T3404 288-296 NN denotes patients
T3403 285-287 IN denotes of
T3402 280-284 NN denotes PBMC
T3401 277-279 IN denotes in
T3400 266-276 NN denotes production
T3399 260-265 NN denotes IL-17
T3397 245-247 TO denotes to
T3396 237-244 NN denotes stimuli
T3395 229-236 JJ denotes various
T3394 224-228 VB denotes used
T3393 221-223 PRP denotes we
T3392 215-220 NN denotes study
T3391 207-214 JJ denotes present
T3390 203-206 DT denotes the
T3389 200-202 IN denotes In
T3388 189-198 JJ denotes uncertain
T3387 181-188 VB denotes remains
T3386 170-180 NN denotes production
T3385 164-169 NN denotes IL-17
T3384 160-163 IN denotes for
T3383 152-159 NN denotes pathway
T3382 139-151 NN denotes transduction
T3381 132-138 NN denotes signal
T3380 118-131 JJ denotes intracellular
T3379 114-117 DT denotes the
T3378 112-113 -COMMA- denotes ,
T3377 111-112 -RRB- denotes ]
T3376 103-111 CD denotes 12,15,16
T3375 102-103 -LRB- denotes [
T3374 94-101 NN denotes studies
T3373 86-93 JJ denotes earlier
T3372 83-85 IN denotes in
T3371 72-82 VB denotes documented
T3370 67-71 VB denotes been
T3369 63-66 VB denotes has
T3368 60-62 NN denotes RA
T3367 57-59 IN denotes in
T3366 44-56 NN denotes inflammation
T3365 38-43 JJ denotes joint
T3364 35-37 IN denotes in
T3363 29-34 NN denotes IL-17
T3362 26-28 IN denotes of
T3361 13-25 NN denotes contribution
T3360 9-12 DT denotes the
T3359 0-8 IN denotes Although
T3398 248-259 VB denotes investigate
R1631 T3361 T3360 arg1Of contribution,the
R1632 T3361 T3362 arg1Of contribution,of
R1633 T3361 T3364 arg1Of contribution,in
R1634 T3361 T3369 arg1Of contribution,has
R1635 T3361 T3370 arg1Of contribution,been
R1636 T3361 T3371 arg2Of contribution,documented
R1637 T3363 T3362 arg2Of IL-17,of
R1638 T3366 T3364 arg2Of inflammation,in
R1639 T3366 T3365 arg1Of inflammation,joint
R1640 T3366 T3367 arg1Of inflammation,in
R1641 T3368 T3367 arg2Of RA,in
R1642 T3371 T3359 arg2Of documented,Although
R1643 T3371 T3369 arg2Of documented,has
R1644 T3371 T3370 arg2Of documented,been
R1645 T3371 T3372 arg1Of documented,in
R1646 T3374 T3372 arg2Of studies,in
R1647 T3374 T3373 arg1Of studies,earlier
R1648 T3374 T3375 arg1Of studies,[
R1649 T3376 T3375 arg2Of "12,15,16",[
R1650 T3377 T3375 arg3Of ],[
R1651 T3383 T3379 arg1Of pathway,the
R1652 T3383 T3380 arg1Of pathway,intracellular
R1653 T3383 T3381 arg1Of pathway,signal
R1654 T3383 T3382 arg1Of pathway,transduction
R1655 T3383 T3384 arg1Of pathway,for
R1656 T3383 T3387 arg1Of pathway,remains
R1657 T3383 T3388 arg1Of pathway,uncertain
R1658 T3386 T3384 arg2Of production,for
R1659 T3386 T3385 arg1Of production,IL-17
R1660 T3387 T3359 arg1Of remains,Although
R1661 T3387 T3378 arg1Of remains,","
R1662 T3388 T3387 arg2Of uncertain,remains
R1663 T3392 T3389 arg2Of study,In
R1664 T3392 T3390 arg1Of study,the
R1665 T3392 T3391 arg1Of study,present
R1666 T3393 T3394 arg1Of we,used
R1667 T3393 T3398 arg1Of we,investigate
R1668 T3394 T3389 arg1Of used,In
R1669 T3396 T3394 arg2Of stimuli,used
R1670 T3396 T3395 arg1Of stimuli,various
R1671 T3398 T3394 arg3Of investigate,used
R1672 T3398 T3397 arg1Of investigate,to
R1673 T3400 T3398 arg2Of production,investigate
R1674 T3400 T3399 arg1Of production,IL-17
R1675 T3400 T3401 arg1Of production,in
R1676 T3402 T3403 arg1Of PBMC,of
R1677 T3402 T3407 arg1Of PBMC,and
R1678 T3404 T3403 arg2Of patients,of
R1679 T3404 T3405 arg1Of patients,with
R1680 T3406 T3405 arg2Of RA,with
R1681 T3407 T3401 arg2Of and,in
R1682 T3411 T3407 arg2Of pathway,and
R1683 T3411 T3408 arg1Of pathway,its
R1684 T3411 T3409 arg1Of pathway,signaling
R1685 T3411 T3410 arg1Of pathway,transduction

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3512 260-265 Protein denotes IL-17
T3511 164-169 Protein denotes IL-17
T3510 29-34 Protein denotes IL-17

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3706 260-265 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T3705 164-169 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T3704 29-34 http://www.uniprot.org/uniprot/Q16552 denotes IL-17

GO-BP

Id Subject Object Predicate Lexical cue
T2824 323-335 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T2823 139-151 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T2822 313-343 http://purl.obolibrary.org/obo/GO_0036499 denotes signaling transduction pathway
T2821 132-159 http://purl.obolibrary.org/obo/GO_0036499 denotes signal transduction pathway
T2820 313-343 http://purl.obolibrary.org/obo/GO_0036500 denotes signaling transduction pathway
T2819 132-159 http://purl.obolibrary.org/obo/GO_0036500 denotes signal transduction pathway
T2818 313-343 http://purl.obolibrary.org/obo/GO_0036498 denotes signaling transduction pathway
T2817 132-159 http://purl.obolibrary.org/obo/GO_0036498 denotes signal transduction pathway
T2815 313-335 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling transduction
T2814 132-151 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T2812 313-322 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T2811 132-138 http://purl.obolibrary.org/obo/GO_0023052 denotes signal
T2809 118-159 http://purl.obolibrary.org/obo/GO_1902531 denotes intracellular signal transduction pathway
T2807 118-159 http://purl.obolibrary.org/obo/GO_1902532 denotes intracellular signal transduction pathway
T2805 313-343 http://purl.obolibrary.org/obo/GO_0035556 denotes signaling transduction pathway
T2804 118-159 http://purl.obolibrary.org/obo/GO_0035556 denotes intracellular signal transduction pathway
T2802 118-159 http://purl.obolibrary.org/obo/GO_1902533 denotes intracellular signal transduction pathway
T2801 44-56 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T2800 260-276 http://purl.obolibrary.org/obo/GO_0032620 denotes IL-17 production
T2799 164-180 http://purl.obolibrary.org/obo/GO_0032620 denotes IL-17 production
T2796 260-276 http://purl.obolibrary.org/obo/GO_0032660 denotes IL-17 production
T2795 164-180 http://purl.obolibrary.org/obo/GO_0032660 denotes IL-17 production

GO-MF

Id Subject Object Predicate Lexical cue
T3534 260-265 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T3533 164-169 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T3532 29-34 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17

GO-CC

Id Subject Object Predicate Lexical cue
T3564 118-131 http://purl.obolibrary.org/obo/GO_0005622 denotes intracellular

sentences

Id Subject Object Predicate Lexical cue
T2763 200-344 Sentence denotes In the present study we used various stimuli to investigate IL-17 production in PBMC of patients with RA and its signaling transduction pathway.
T2762 0-199 Sentence denotes Although the contribution of IL-17 in joint inflammation in RA has been documented in earlier studies [12,15,16], the intracellular signal transduction pathway for IL-17 production remains uncertain.
T32 0-199 Sentence denotes Although the contribution of IL-17 in joint inflammation in RA has been documented in earlier studies [12,15,16], the intracellular signal transduction pathway for IL-17 production remains uncertain.
T33 200-344 Sentence denotes In the present study we used various stimuli to investigate IL-17 production in PBMC of patients with RA and its signaling transduction pathway.

simple1

Id Subject Object Predicate Lexical cue
T3683 260-265 Protein denotes IL-17
T3682 164-169 Protein denotes IL-17
T3681 29-34 Protein denotes IL-17

DLUT931

Id Subject Object Predicate Lexical cue
T3810 266-276 Gene_expression denotes production
T3809 170-180 Gene_expression denotes production
T3792 260-265 Protein denotes IL-17
T3791 164-169 Protein denotes IL-17
T3790 29-34 Protein denotes IL-17
R1802 T3791 T3809 themeOf IL-17,production
R1803 T3792 T3810 themeOf IL-17,production

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4508 280-284 Entity denotes PBMC
T4507 60-62 Protein denotes RA
T4587 248-343 Gene_expression denotes investigate IL-17 production in PBMC of patients with RA and its signaling transduction pathway
T4586 164-180 Gene_expression denotes IL-17 production
T4555 260-265 Protein denotes IL-17
T4547 302-304 Protein denotes RA
T4542 26-34 Protein denotes of IL-17
T4529 164-169 Protein denotes IL-17
R2456 T4529 T4586 themeOf IL-17,IL-17 production
R2467 T4555 T4587 themeOf IL-17,investigate IL-17 production in PBMC of patients with RA and its signaling transduction pathway

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4390 343-344 . denotes .
T4389 336-343 NN denotes pathway
T4388 323-335 NN denotes transduction
T4387 313-322 VBG denotes signaling
T4386 309-312 PRP$ denotes its
T4385 305-308 CC denotes and
T4384 302-304 NNP denotes RA
T4383 297-301 IN denotes with
T4382 288-296 NNS denotes patients
T4381 285-287 IN denotes of
T4380 280-284 NNP denotes PBMC
T4379 277-279 IN denotes in
T4378 266-276 NN denotes production
T4377 260-265 JJ denotes IL-17
T4376 248-259 VB denotes investigate
T4375 245-247 TO denotes to
T4374 237-244 NNS denotes stimuli
T4373 229-236 JJ denotes various
T4372 224-228 VBD denotes used
T4371 221-223 PRP denotes we
T4370 215-220 NN denotes study
T4369 207-214 JJ denotes present
T4368 203-206 DT denotes the
T4367 200-202 IN denotes In
T4366 198-199 . denotes .
T4365 189-198 JJ denotes uncertain
T4364 181-188 VBZ denotes remains
T4363 170-180 NN denotes production
T4362 164-169 JJ denotes IL-17
T4361 160-163 IN denotes for
T4360 152-159 NN denotes pathway
T4359 139-151 NN denotes transduction
T4358 132-138 NN denotes signal
T4357 118-131 JJ denotes intracellular
T4356 114-117 DT denotes the
T4355 112-113 , denotes ,
T4354 111-112 NNP denotes ]
T4353 103-111 CD denotes 12,15,16
T4352 102-103 NNP denotes [
T4351 94-101 NNS denotes studies
T4350 86-93 JJR denotes earlier
T4349 83-85 IN denotes in
T4348 72-82 VBN denotes documented
T4347 67-71 VBN denotes been
T4346 63-66 VBZ denotes has
T4345 60-62 NNP denotes RA
T4344 57-59 IN denotes in
T4343 44-56 NN denotes inflammation
T4342 38-43 JJ denotes joint
T4341 35-37 IN denotes in
T4340 29-34 NNP denotes IL-17
T4339 26-28 IN denotes of
T4338 13-25 NN denotes contribution
T4337 9-12 DT denotes the
T4336 0-8 IN denotes Although
R2254 T4336 T4348 mark Although,documented
R2256 T4337 T4338 det the,contribution
R2257 T4338 T4348 nsubjpass contribution,documented
R2259 T4339 T4338 prep of,contribution
R2260 T4340 T4339 pobj IL-17,of
R2261 T4341 T4338 prep in,contribution
R2263 T4342 T4343 amod joint,inflammation
R2264 T4343 T4341 pobj inflammation,in
R2266 T4344 T4343 prep in,inflammation
R2267 T4345 T4344 pobj RA,in
R2268 T4346 T4348 aux has,documented
R2270 T4347 T4348 auxpass been,documented
R2271 T4348 T4364 advcl documented,remains
R2272 T4349 T4348 prep in,documented
R2274 T4350 T4351 amod earlier,studies
R2275 T4351 T4349 pobj studies,in
R2276 T4352 T4354 compound [,]
R2278 T4353 T4354 compound "12,15,16",]
R2279 T4354 T4364 nsubj ],remains
R2280 T4355 T4354 punct ",",]
R2281 T4356 T4360 det the,pathway
R2282 T4357 T4360 amod intracellular,pathway
R2283 T4358 T4360 nmod signal,pathway
R2285 T4359 T4360 compound transduction,pathway
R2286 T4360 T4354 appos pathway,]
R2288 T4361 T4360 prep for,pathway
R2290 T4362 T4363 amod IL-17,production
R2291 T4363 T4361 pobj production,for
R2293 T4364 T4364 ROOT remains,remains
R2294 T4365 T4364 acomp uncertain,remains
R2295 T4366 T4364 punct .,remains
R2297 T4367 T4367 ROOT In,In
R2298 T4368 T4370 det the,study
R2299 T4369 T4370 amod present,study
R2301 T4370 T4367 pobj study,In
R2303 T4371 T4372 nsubj we,used
R2304 T4372 T4370 relcl used,study
R2305 T4373 T4374 amod various,stimuli
R2307 T4374 T4372 dobj stimuli,used
R2308 T4375 T4376 aux to,investigate
R2309 T4376 T4372 xcomp investigate,used
R2310 T4377 T4378 amod IL-17,production
R2312 T4378 T4376 dobj production,investigate
R2313 T4379 T4378 prep in,production
R2315 T4380 T4379 pobj PBMC,in
R2316 T4381 T4380 prep of,PBMC
R2317 T4382 T4381 pobj patients,of
R2319 T4383 T4382 prep with,patients
R2320 T4384 T4383 pobj RA,with
R2321 T4385 T4384 cc and,RA
R2323 T4386 T4389 poss its,pathway
R2324 T4387 T4389 amod signaling,pathway
R2326 T4388 T4389 compound transduction,pathway
R2327 T4389 T4384 conj pathway,RA
R2328 T4390 T4367 punct .,In

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3646 266-276 Gene_expression denotes production
T3645 260-265 Protein denotes IL-17
T3644 29-34 Protein denotes IL-17
R1774 T3645 T3646 themeOf IL-17,production

testone

Id Subject Object Predicate Lexical cue
T2151 266-276 Gene_expression denotes production
T2150 170-180 Gene_expression denotes production
T2137 260-265 Protein denotes IL-17
T2136 164-169 Protein denotes IL-17
T2135 29-34 Protein denotes IL-17
R1083 T2136 T2150 themeOf IL-17,production
R1084 T2137 T2151 themeOf IL-17,production