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PMC:1064895 / 4628-4837 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T2219 98-108 Gene_expression denotes production
T2218 92-97 Protein denotes IL-17
T2217 81-88 Positive_regulation denotes trigger
T2216 0-5 Protein denotes IL-15
T2177 92-97 Protein denotes IL-17
T2176 0-5 Protein denotes IL-15
R1103 T2218 T2219 themeOf IL-17,production
R1104 T2219 T2217 themeOf production,trigger

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T3756 7-15 Localization denotes secreted
T3755 81-88 Positive_regulation denotes trigger
T3754 98-108 Gene_expression denotes production
T3736 92-97 Protein denotes IL-17
T3735 0-5 Protein denotes IL-15
R1792 T3735 T3756 themeOf IL-15,secreted
R1795 T3736 T3754 themeOf IL-17,production
R1819 T3754 T3755 themeOf production,trigger

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4643 7-15 Localization denotes secreted
T4642 98-108 Gene_expression denotes production
T4641 81-88 Positive_regulation denotes trigger
T4625 92-97 Protein denotes IL-17
T4624 0-5 Protein denotes IL-15
R2470 T4624 T4643 themeOf IL-15,secreted
R2471 T4625 T4642 themeOf IL-17,production
R2481 T4642 T4641 themeOf production,trigger

2_test

Id Subject Object Predicate Lexical cue
15642134-10679127-4202018 205-207 10679127 denotes 13

biosemtest

Id Subject Object Predicate Lexical cue
T2725 59-67 UMLS/C0700287 denotes ed to be
T2723 191-200 UMLS/C0332324 denotes ive pathw
T2707 98-114 UMLS/C1819444 denotes production in RA
T2705 183-190 UMLS/C0038317 denotes d sensi
T2701 87-94 UMLS/C0032930 denotes r of IL
T2685 157-161 UMLS/C1321301 denotes by c
T2684 121-155 UMLS/C1321301 denotes eral blood mononuclear cells (PBMC
T2682 201-209 UMLS/C1704259 denotes ys [13].
T2675 201-209 UMLS/C1705987 denotes ys [13].
T2655 27-48 UMLS/C0001280 denotes ted macrophages, has
T2537 50-53 UMLS/C2348947 denotes en
T2486 6-11 UMLS/C0254610 denotes secr
T2473 191-200 UMLS/C1550474 denotes ive pathw
T2444 6-11 UMLS/C1334105 denotes secr
T2277 68-70 UMLS/C0319022 denotes an
T2527 13-21 UMLS/C1327616 denotes ed from
T2498 6-11 UMLS/C1149222 denotes secr
T2268 59-67 UMLS/C1709908 denotes ed to be
T2239 87-94 UMLS/C1444748 denotes r of IL
T2238 166-178 UMLS/C0010592 denotes porine and s
T2237 166-178 UMLS/C0010594 denotes porine and s

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3331 207-208 -RRB- denotes ]
T3330 205-207 CD denotes 13
T3329 204-205 -LRB- denotes [
T3328 195-203 NN denotes pathways
T3327 185-194 JJ denotes sensitive
T3326 177-184 NN denotes steroid
T3325 173-176 CC denotes and
T3324 160-172 NN denotes cyclosporine
T3323 157-159 IN denotes by
T3322 155-156 -RRB- denotes )
T3321 151-155 NN denotes PBMC
T3320 150-151 -LRB- denotes (
T3319 144-149 NN denotes cells
T3318 132-143 JJ denotes mononuclear
T3317 126-131 NN denotes blood
T3316 115-125 JJ denotes peripheral
T3315 112-114 NN denotes RA
T3314 109-111 IN denotes in
T3313 98-108 NN denotes production
T3312 92-97 NN denotes IL-17
T3311 89-91 IN denotes of
T3310 81-88 NN denotes trigger
T3309 71-80 JJ denotes important
T3308 68-70 DT denotes an
T3307 65-67 VB denotes be
T3306 62-64 TO denotes to
T3305 53-61 VB denotes reported
T3304 48-52 VB denotes been
T3303 44-47 VB denotes has
T3302 42-43 -COMMA- denotes ,
T3301 31-42 NN denotes macrophages
T3300 21-30 VB denotes activated
T3299 16-20 IN denotes from
T3298 7-15 VB denotes secreted
T3297 5-6 -COMMA- denotes ,
T3296 0-5 NN denotes IL-15
R1565 T3296 T3297 arg1Of IL-15,","
R1566 T3296 T3298 arg2Of IL-15,secreted
R1567 T3296 T3303 arg1Of IL-15,has
R1568 T3296 T3304 arg1Of IL-15,been
R1569 T3296 T3305 arg2Of IL-15,reported
R1570 T3296 T3307 arg1Of IL-15,be
R1571 T3298 T3299 arg1Of secreted,from
R1572 T3301 T3299 arg2Of macrophages,from
R1573 T3301 T3300 arg2Of macrophages,activated
R1574 T3305 T3302 arg1Of reported,","
R1575 T3305 T3303 arg2Of reported,has
R1576 T3305 T3304 arg2Of reported,been
R1577 T3307 T3305 arg3Of be,reported
R1578 T3307 T3306 arg1Of be,to
R1579 T3307 T3314 arg1Of be,in
R1580 T3307 T3323 arg1Of be,by
R1581 T3307 T3329 arg1Of be,[
R1582 T3310 T3307 arg2Of trigger,be
R1583 T3310 T3308 arg1Of trigger,an
R1584 T3310 T3309 arg1Of trigger,important
R1585 T3310 T3311 arg1Of trigger,of
R1586 T3313 T3311 arg2Of production,of
R1587 T3313 T3312 arg1Of production,IL-17
R1588 T3319 T3314 arg2Of cells,in
R1589 T3319 T3315 arg1Of cells,RA
R1590 T3319 T3316 arg1Of cells,peripheral
R1591 T3319 T3317 arg1Of cells,blood
R1592 T3319 T3318 arg1Of cells,mononuclear
R1593 T3319 T3320 arg1Of cells,(
R1594 T3321 T3320 arg2Of PBMC,(
R1595 T3322 T3320 arg3Of ),(
R1596 T3324 T3325 arg1Of cyclosporine,and
R1597 T3325 T3323 arg2Of and,by
R1598 T3328 T3325 arg2Of pathways,and
R1599 T3328 T3326 arg1Of pathways,steroid
R1600 T3328 T3327 arg1Of pathways,sensitive
R1601 T3330 T3329 arg2Of 13,[
R1602 T3331 T3329 arg3Of ],[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3505 92-97 Protein denotes IL-17
T3504 0-5 Protein denotes IL-15

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3702 92-97 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T3697 0-5 http://www.uniprot.org/uniprot/P40933 denotes IL-15

UBERON-AE

Id Subject Object Predicate Lexical cue
T2234 126-131 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood

GO-BP

Id Subject Object Predicate Lexical cue
T2797 92-108 http://purl.obolibrary.org/obo/GO_0032620 denotes IL-17 production
T2793 92-108 http://purl.obolibrary.org/obo/GO_0032660 denotes IL-17 production
T2792 21-42 http://purl.obolibrary.org/obo/GO_0042116 denotes activated macrophages

GO-MF

Id Subject Object Predicate Lexical cue
T3530 92-97 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T3524 0-5 http://purl.obolibrary.org/obo/GO_0016170 denotes IL-15

GO-CC

Id Subject Object Predicate Lexical cue
T3562 144-149 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T2760 0-209 Sentence denotes IL-15, secreted from activated macrophages, has been reported to be an important trigger of IL-17 production in RA peripheral blood mononuclear cells (PBMC) by cyclosporine and steroid sensitive pathways [13].
T30 0-209 Sentence denotes IL-15, secreted from activated macrophages, has been reported to be an important trigger of IL-17 production in RA peripheral blood mononuclear cells (PBMC) by cyclosporine and steroid sensitive pathways [13].

simple1

Id Subject Object Predicate Lexical cue
T3676 92-97 Protein denotes IL-17
T3675 0-5 Protein denotes IL-15

DLUT931

Id Subject Object Predicate Lexical cue
T3806 81-88 Positive_regulation denotes trigger
T3805 98-108 Gene_expression denotes production
T3804 21-30 Positive_regulation denotes activated
T3803 7-15 Localization denotes secreted
T3785 92-97 Protein denotes IL-17
T3784 0-5 Protein denotes IL-15
R1811 T3803 T3804 themeOf secreted,activated
R1813 T3805 T3806 themeOf production,trigger
R1796 T3784 T3803 themeOf IL-15,secreted
R1797 T3785 T3805 themeOf IL-17,production

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4513 92-97 Protein denotes IL-17
T4511 0-42 Protein denotes IL-15, secreted from activated macrophages
T4496 112-114 Protein denotes RA
T4590 0-42 Gene_expression denotes IL-15, secreted from activated macrophages
T4588 89-108 Gene_expression denotes of IL-17 production
T4578 21-42 Entity denotes activated macrophages
T4570 177-194 Entity denotes steroid sensitive
T4526 112-156 Entity denotes RA peripheral blood mononuclear cells (PBMC)
T4522 151-155 Entity denotes PBMC
R2449 T4511 T4590 themeOf "IL-15, secreted from activated macrophages","IL-15, secreted from activated macrophages"
R2450 T4513 T4588 themeOf IL-17,of IL-17 production

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4305 208-209 . denotes .
T4304 207-208 NNP denotes ]
T4303 205-207 CD denotes 13
T4302 204-205 NNP denotes [
T4301 195-203 NNS denotes pathways
T4300 185-194 JJ denotes sensitive
T4299 177-184 JJ denotes steroid
T4298 173-176 CC denotes and
T4297 160-172 NN denotes cyclosporine
T4296 157-159 IN denotes by
T4295 155-156 -RRB- denotes )
T4294 151-155 NNP denotes PBMC
T4293 150-151 -LRB- denotes (
T4292 144-149 NNS denotes cells
T4291 132-143 NN denotes mononuclear
T4290 126-131 NN denotes blood
T4289 115-125 JJ denotes peripheral
T4288 112-114 NNP denotes RA
T4287 109-111 IN denotes in
T4286 98-108 NN denotes production
T4285 92-97 JJ denotes IL-17
T4284 89-91 IN denotes of
T4283 81-88 NN denotes trigger
T4282 71-80 JJ denotes important
T4281 68-70 DT denotes an
T4280 65-67 VB denotes be
T4279 62-64 TO denotes to
T4278 53-61 VBN denotes reported
T4277 48-52 VBN denotes been
T4276 44-47 VBZ denotes has
T4275 42-43 , denotes ,
T4274 31-42 NNS denotes macrophages
T4273 21-30 VBN denotes activated
T4272 16-20 IN denotes from
T4271 7-15 VBN denotes secreted
T4270 5-6 , denotes ,
T4269 0-5 CD denotes IL-15
R2249 T4269 T4271 nsubj IL-15,secreted
R2251 T4270 T4269 punct ",",IL-15
R2252 T4271 T4271 ROOT secreted,secreted
R2253 T4272 T4271 prep from,secreted
R2255 T4273 T4274 amod activated,macrophages
R2258 T4274 T4272 pobj macrophages,from
R2262 T4275 T4278 punct ",",reported
R2265 T4276 T4278 aux has,reported
R2269 T4277 T4278 auxpass been,reported
R2273 T4278 T4271 conj reported,secreted
R2277 T4279 T4280 aux to,be
R2284 T4280 T4278 xcomp be,reported
R2287 T4281 T4283 det an,trigger
R2289 T4282 T4283 amod important,trigger
R2292 T4283 T4280 attr trigger,be
R2296 T4284 T4283 prep of,trigger
R2300 T4285 T4286 amod IL-17,production
R2302 T4286 T4284 pobj production,of
R2306 T4287 T4286 prep in,production
R2311 T4288 T4292 compound RA,cells
R2314 T4289 T4290 compound peripheral,blood
R2318 T4290 T4291 compound blood,mononuclear
R2322 T4291 T4292 compound mononuclear,cells
R2325 T4292 T4287 pobj cells,in
R2329 T4293 T4286 punct (,production
R2336 T4294 T4283 appos PBMC,trigger
R2341 T4295 T4283 punct ),trigger
R2345 T4296 T4278 agent by,reported
R2348 T4297 T4296 pobj cyclosporine,by
R2351 T4298 T4297 cc and,cyclosporine
R2356 T4299 T4301 amod steroid,pathways
R2360 T4300 T4301 amod sensitive,pathways
R2363 T4301 T4297 conj pathways,cyclosporine
R2368 T4302 T4304 nmod [,]
R2371 T4303 T4304 nummod 13,]
R2375 T4304 T4278 conj ],reported
R2379 T4305 T4278 punct .,reported

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3641 7-15 Localization denotes secreted
T3640 0-5 Protein denotes IL-15
R1773 T3640 T3641 themeOf IL-15,secreted

testone

Id Subject Object Predicate Lexical cue
T2147 98-108 Gene_expression denotes production
T2146 81-88 Positive_regulation denotes trigger
T2130 92-97 Protein denotes IL-17
T2129 0-5 Protein denotes IL-15
R1080 T2130 T2147 themeOf IL-17,production
R1087 T2147 T2146 themeOf production,trigger