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PMC:1064895 / 4443-4627 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T2215 147-150 Protein denotes CD4
T2214 135-143 Gene_expression denotes produced
T2213 10-15 Protein denotes IL-17
T2175 147-150 Protein denotes CD4
T2174 10-15 Protein denotes IL-17
R1102 T2213 T2214 themeOf IL-17,produced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T3753 135-143 Gene_expression denotes produced
T3734 147-150 Protein denotes CD4
T3733 10-15 Protein denotes IL-17
R1789 T3733 T3753 themeOf IL-17,produced

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4623 147-150 Protein denotes CD4
T4622 10-15 Protein denotes IL-17

2_test

Id Subject Object Predicate Lexical cue
15642134-10225978-4202016 177-179 10225978 denotes 11
15642134-10323452-4202017 180-182 10323452 denotes 12

biosemtest

Id Subject Object Predicate Lexical cue
T2729 16-21 UMLS/C1825592 denotes in sy
T2719 109-123 UMLS/C0029408 denotes rthritis (OA),
T2694 60-66 UMLS/C1299351 denotes in pa
T2659 95-103 UMLS/C1705908 denotes ts with
T2658 70-78 UMLS/C1705908 denotes ts with
T2638 60-66 UMLS/C0205250 denotes in pa
T2590 95-103 UMLS/C1550655 denotes ts with
T2589 70-78 UMLS/C1550655 denotes ts with
T2570 60-66 UMLS/C1522410 denotes in pa
T2567 25-40 UMLS/C0039097 denotes al fluids were
T2566 173-181 UMLS/C0039099 denotes um [11,1
T2549 158-165 UMLS/C0039194 denotes s in th
T2406 60-66 UMLS/C1561957 denotes in pa
T2402 60-66 UMLS/C1561958 denotes in pa
T2392 16-21 UMLS/C1522571 denotes in sy
T2387 95-103 UMLS/C0030705 denotes ts with
T2386 70-78 UMLS/C0030705 denotes ts with
T2368 16-21 UMLS/C0384648 denotes in sy
T2362 95-103 UMLS/C1578479 denotes ts with
T2361 70-78 UMLS/C1578479 denotes ts with
T2356 95-103 UMLS/C1578483 denotes ts with
T2355 70-78 UMLS/C1578483 denotes ts with
T2353 95-103 UMLS/C1578480 denotes ts with
T2352 70-78 UMLS/C1578480 denotes ts with
T2350 95-103 UMLS/C1578481 denotes ts with
T2349 70-78 UMLS/C1578481 denotes ts with
T2347 95-103 UMLS/C1578486 denotes ts with
T2346 70-78 UMLS/C1578486 denotes ts with
T2343 95-103 UMLS/C1578484 denotes ts with
T2342 70-78 UMLS/C1578484 denotes ts with
T2339 95-103 UMLS/C1578485 denotes ts with
T2338 70-78 UMLS/C1578485 denotes ts with
T2309 16-21 UMLS/C1623218 denotes in sy
T2512 6-12 UMLS/C0456079 denotes of IL
T2492 6-12 UMLS/C0441889 denotes of IL

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3295 182-183 -RRB- denotes ]
T3294 177-182 CD denotes 11,12
T3293 176-177 -LRB- denotes [
T3292 167-175 NN denotes synovium
T3291 163-166 DT denotes the
T3290 160-162 IN denotes in
T3289 154-159 NN denotes cells
T3288 152-153 NN denotes T
T3287 147-151 JJ denotes CD4+
T3286 144-146 IN denotes by
T3285 135-143 VB denotes produced
T3284 131-134 VB denotes was
T3283 128-130 PRP denotes it
T3282 124-127 CC denotes and
T3281 122-123 -COMMA- denotes ,
T3280 121-122 -RRB- denotes )
T3279 119-121 NN denotes OA
T3278 118-119 -LRB- denotes (
T3277 103-117 NN denotes osteoarthritis
T3276 98-102 IN denotes with
T3275 89-97 NN denotes patients
T3274 86-88 IN denotes in
T3273 81-85 IN denotes than
T3272 78-80 NN denotes RA
T3271 73-77 IN denotes with
T3270 64-72 NN denotes patients
T3269 61-63 IN denotes in
T3268 54-60 JJ denotes higher
T3267 40-53 RB denotes significantly
T3266 35-39 VB denotes were
T3265 28-34 NN denotes fluids
T3264 19-27 JJ denotes synovial
T3263 16-18 IN denotes in
T3262 10-15 NN denotes IL-17
T3261 7-9 IN denotes of
T3260 0-6 NN denotes Levels
R1528 T3260 T3261 arg1Of Levels,of
R1529 T3260 T3263 arg1Of Levels,in
R1530 T3260 T3266 arg1Of Levels,were
R1531 T3260 T3268 arg1Of Levels,higher
R1532 T3262 T3261 arg2Of IL-17,of
R1533 T3265 T3263 arg2Of fluids,in
R1534 T3265 T3264 arg1Of fluids,synovial
R1535 T3266 T3282 arg1Of were,and
R1536 T3268 T3266 arg2Of higher,were
R1537 T3268 T3267 arg1Of higher,significantly
R1538 T3268 T3269 arg1Of higher,in
R1539 T3268 T3273 arg1Of higher,than
R1540 T3270 T3269 arg2Of patients,in
R1541 T3270 T3271 arg1Of patients,with
R1542 T3272 T3271 arg2Of RA,with
R1543 T3274 T3273 arg2Of in,than
R1544 T3275 T3274 arg2Of patients,in
R1545 T3275 T3276 arg1Of patients,with
R1546 T3277 T3276 arg2Of osteoarthritis,with
R1547 T3277 T3278 arg1Of osteoarthritis,(
R1548 T3279 T3278 arg2Of OA,(
R1549 T3280 T3278 arg3Of ),(
R1550 T3282 T3281 arg1Of and,","
R1551 T3282 T3293 arg1Of and,[
R1552 T3283 T3284 arg1Of it,was
R1553 T3283 T3285 arg2Of it,produced
R1554 T3285 T3282 arg2Of produced,and
R1555 T3285 T3284 arg2Of produced,was
R1556 T3285 T3290 arg1Of produced,in
R1557 T3289 T3285 arg1Of cells,produced
R1558 T3289 T3286 arg2Of cells,by
R1559 T3289 T3287 arg1Of cells,CD4+
R1560 T3289 T3288 arg1Of cells,T
R1561 T3292 T3290 arg2Of synovium,in
R1562 T3292 T3291 arg1Of synovium,the
R1563 T3294 T3293 arg2Of "11,12",[
R1564 T3295 T3293 arg3Of ],[

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T3481 10-15 Antecedent denotes IL-17
T3480 128-130 Anaphor denotes it
R1749 T3480 T3481 boundBy it,IL-17

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3503 147-150 Protein denotes CD4
T3502 10-15 Protein denotes IL-17

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3709 147-150 http://www.uniprot.org/uniprot/P01730 denotes CD4
T3701 10-15 http://www.uniprot.org/uniprot/Q16552 denotes IL-17

UBERON-AE

Id Subject Object Predicate Lexical cue
T2233 19-34 http://purl.obolibrary.org/obo/UBERON_0001090 denotes synovial fluids

GO-MF

Id Subject Object Predicate Lexical cue
T3529 10-15 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17

GO-CC

Id Subject Object Predicate Lexical cue
T3561 154-159 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T2759 0-184 Sentence denotes Levels of IL-17 in synovial fluids were significantly higher in patients with RA than in patients with osteoarthritis (OA), and it was produced by CD4+ T cells in the synovium [11,12].
T29 0-184 Sentence denotes Levels of IL-17 in synovial fluids were significantly higher in patients with RA than in patients with osteoarthritis (OA), and it was produced by CD4+ T cells in the synovium [11,12].

simple1

Id Subject Object Predicate Lexical cue
T3674 147-150 Protein denotes CD4
T3673 10-15 Protein denotes IL-17

DLUT931

Id Subject Object Predicate Lexical cue
T3783 147-150 Protein denotes CD4
T3782 10-15 Protein denotes IL-17

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4566 144-159 Entity denotes by CD4+ T cells
T4554 78-80 Protein denotes RA
T4539 119-121 Entity denotes OA
T4523 10-15 Protein denotes IL-17

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4268 183-184 . denotes .
T4267 182-183 NNP denotes ]
T4266 177-182 CD denotes 11,12
T4265 176-177 NNP denotes [
T4264 167-175 NN denotes synovium
T4263 163-166 DT denotes the
T4262 160-162 IN denotes in
T4261 154-159 NNS denotes cells
T4260 152-153 NNP denotes T
T4259 150-151 NNP denotes +
T4258 147-150 NNP denotes CD4
T4257 144-146 IN denotes by
T4256 135-143 VBN denotes produced
T4255 131-134 VBD denotes was
T4254 128-130 PRP denotes it
T4253 124-127 CC denotes and
T4252 122-123 , denotes ,
T4251 121-122 -RRB- denotes )
T4250 119-121 NNP denotes OA
T4249 118-119 -LRB- denotes (
T4248 103-117 NNS denotes osteoarthritis
T4247 98-102 IN denotes with
T4246 89-97 NNS denotes patients
T4245 86-88 IN denotes in
T4244 81-85 IN denotes than
T4243 78-80 NNP denotes RA
T4242 73-77 IN denotes with
T4241 64-72 NNS denotes patients
T4240 61-63 IN denotes in
T4239 54-60 JJR denotes higher
T4238 40-53 RB denotes significantly
T4237 35-39 VBD denotes were
T4236 28-34 NNS denotes fluids
T4235 19-27 JJ denotes synovial
T4234 16-18 IN denotes in
T4233 10-15 NNP denotes IL-17
T4232 7-9 IN denotes of
T4231 0-6 NNS denotes Levels
R2125 T4239 T4237 acomp higher,were
R2134 T4240 T4237 prep in,were
R2138 T4241 T4240 pobj patients,in
R2140 T4242 T4241 prep with,patients
R2145 T4243 T4242 pobj RA,with
R2149 T4244 T4237 prep than,were
R2153 T4245 T4244 prep in,than
R2157 T4246 T4245 pobj patients,in
R2161 T4247 T4246 prep with,patients
R2165 T4248 T4247 pobj osteoarthritis,with
R2169 T4249 T4248 punct (,osteoarthritis
R2173 T4250 T4248 appos OA,osteoarthritis
R2177 T4251 T4248 punct ),osteoarthritis
R2180 T4252 T4237 punct ",",were
R2187 T4253 T4237 cc and,were
R2192 T4254 T4256 nsubjpass it,produced
R2196 T4255 T4256 auxpass was,produced
R2200 T4256 T4237 conj produced,were
R2202 T4257 T4256 agent by,produced
R2204 T4258 T4261 compound CD4,cells
R2207 T4259 T4261 compound +,cells
R2211 T4260 T4261 compound T,cells
R2215 T4261 T4257 pobj cells,by
R2218 T4262 T4261 prep in,cells
R2222 T4263 T4267 det the,]
R2226 T4264 T4265 compound synovium,[
R2230 T4265 T4267 compound [,]
R2237 T4266 T4267 compound "11,12",]
R2240 T4231 T4237 nsubj Levels,were
R2241 T4267 T4262 pobj ],in
R2242 T4232 T4231 prep of,Levels
R2243 T4233 T4232 pobj IL-17,of
R2244 T4234 T4231 prep in,Levels
R2245 T4268 T4256 punct .,produced
R2246 T4235 T4236 amod synovial,fluids
R2247 T4236 T4234 pobj fluids,in
R2248 T4237 T4237 ROOT were,were
R2250 T4238 T4239 advmod significantly,higher

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3639 54-60 Positive_regulation denotes higher
T3638 0-6 Gene_expression denotes Levels
T3637 147-151 Protein denotes CD4+
T3636 10-15 Protein denotes IL-17
R1771 T3636 T3638 themeOf IL-17,Levels
R1772 T3638 T3639 themeOf Levels,higher

testone

Id Subject Object Predicate Lexical cue
T2145 135-143 Gene_expression denotes produced
T2128 147-150 Protein denotes CD4
T2127 10-15 Protein denotes IL-17
R1079 T2127 T2145 themeOf IL-17,produced