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PMC:1064895 / 26989-27204 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T17207 198-203 Protein denotes IL-17
T17206 185-194 Positive_regulation denotes induction
T17205 73-78 Protein denotes IL-15
T17204 67-71 Protein denotes CD28
T17203 40-49 Positive_regulation denotes activated
T17087 198-203 Protein denotes IL-17
T17086 73-78 Protein denotes IL-15
T17085 67-71 Protein denotes CD28
R9321 T17207 T17206 themeOf IL-17,induction

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20159 185-194 Positive_regulation denotes induction
T20158 169-177 Regulation denotes involved
T20100 198-203 Protein denotes IL-17
T20099 73-78 Protein denotes IL-15
T20098 67-71 Protein denotes CD28
R10633 T20100 T20159 themeOf IL-17,induction
R10662 T20159 T20158 themeOf induction,involved

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T21976 185-194 Positive_regulation denotes induction
T21924 198-203 Protein denotes IL-17
T21923 73-78 Protein denotes IL-15
T21922 67-71 Protein denotes CD28
R12047 T21924 T21976 themeOf IL-17,induction

biosemtest

Id Subject Object Predicate Lexical cue
T18085 94-102 UMLS/C0026249 denotes our expe
T18020 157-164 UMLS/C1704259 denotes so acti
T17834 182-190 UMLS/C1314939 denotes he induc
T17789 182-190 UMLS/C1947935 denotes he induc
T17746 134-140 UMLS/C0332148 denotes the NF
T17741 94-102 UMLS/C0018284 denotes our expe
T17979 14-18 UMLS/C0449911 denotes fac
T17961 110-121 UMLS/C1706386 denotes it is most
T17454 85-90 UMLS/C1149222 denotes ogens
T17440 85-90 UMLS/C0254610 denotes ogens
T17423 52-61 UMLS/C1879547 denotes anti-CD3
T17407 85-90 UMLS/C1334105 denotes ogens
T17319 110-121 UMLS/C0681814 denotes it is most
T17646 157-164 UMLS/C1705987 denotes so acti
T17620 198-207 UMLS/C0205263 denotes IL-17 in
T17589 198-207 UMLS/C1621983 denotes IL-17 in

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19298 210-214 NN denotes PBMC
T19297 207-209 NN denotes RA
T19296 204-206 IN denotes in
T19295 198-203 NN denotes IL-17
T19294 195-197 IN denotes of
T19293 185-194 NN denotes induction
T19292 181-184 DT denotes the
T19291 178-180 IN denotes in
T19290 169-177 VB denotes involved
T19289 160-168 RB denotes actively
T19288 155-159 RB denotes also
T19287 152-154 VB denotes is
T19286 144-151 NN denotes pathway
T19285 138-143 NN denotes NF-κB
T19284 134-137 DT denotes the
T19283 129-133 IN denotes that
T19282 122-128 JJ denotes likely
T19281 117-121 RB denotes most
T19280 114-116 VB denotes is
T19279 111-113 PRP denotes it
T19278 109-110 -COMMA- denotes ,
T19277 98-109 NN denotes experiments
T19276 94-97 PRP-DOLLAR- denotes our
T19275 91-93 IN denotes in
T19274 82-90 NN denotes mitogens
T19273 79-81 CC denotes or
T19272 73-78 NN denotes IL-15
T19271 71-72 -COMMA- denotes ,
T19270 53-71 JJ denotes anti-CD3/anti-CD28
T19269 50-52 IN denotes by
T19268 40-49 VB denotes activated
T19267 35-39 RB denotes also
T19266 31-34 VB denotes was
T19265 25-30 NN denotes NF-κB
T19264 20-24 IN denotes that
T19263 15-19 NN denotes fact
T19262 11-14 DT denotes the
T19261 8-10 IN denotes of
T19260 3-7 NN denotes view
T19259 0-2 IN denotes In
R10289 T19260 T19259 arg2Of view,In
R10290 T19260 T19261 arg1Of view,of
R10291 T19263 T19261 arg2Of fact,of
R10292 T19263 T19262 arg1Of fact,the
R10293 T19265 T19266 arg1Of NF-κB,was
R10294 T19265 T19268 arg2Of NF-κB,activated
R10295 T19268 T19263 arg2Of activated,fact
R10296 T19268 T19264 arg1Of activated,that
R10297 T19268 T19266 arg2Of activated,was
R10298 T19268 T19267 arg1Of activated,also
R10299 T19272 T19273 arg1Of IL-15,or
R10300 T19273 T19268 arg1Of or,activated
R10301 T19273 T19269 arg2Of or,by
R10302 T19273 T19270 arg1Of or,anti-CD3/anti-CD28
R10303 T19273 T19271 arg1Of or,","
R10304 T19273 T19275 arg1Of or,in
R10305 T19274 T19273 arg2Of mitogens,or
R10306 T19277 T19275 arg2Of experiments,in
R10307 T19277 T19276 arg1Of experiments,our
R10308 T19280 T19259 arg1Of is,In
R10309 T19280 T19278 arg1Of is,","
R10310 T19282 T19280 arg2Of likely,is
R10311 T19282 T19281 arg1Of likely,most
R10312 T19286 T19284 arg1Of pathway,the
R10313 T19286 T19285 arg1Of pathway,NF-κB
R10314 T19286 T19287 arg1Of pathway,is
R10315 T19286 T19290 arg2Of pathway,involved
R10316 T19290 T19279 arg1Of involved,it
R10317 T19290 T19280 arg1Of involved,is
R10318 T19290 T19282 arg1Of involved,likely
R10319 T19290 T19283 arg1Of involved,that
R10320 T19290 T19287 arg2Of involved,is
R10321 T19290 T19288 arg1Of involved,also
R10322 T19290 T19289 arg1Of involved,actively
R10323 T19290 T19291 arg1Of involved,in
R10324 T19293 T19291 arg2Of induction,in
R10325 T19293 T19292 arg1Of induction,the
R10326 T19293 T19294 arg1Of induction,of
R10327 T19293 T19296 arg1Of induction,in
R10328 T19295 T19294 arg2Of IL-17,of
R10329 T19298 T19296 arg2Of PBMC,in
R10330 T19298 T19297 arg1Of PBMC,RA

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T19515 198-203 Protein denotes IL-17
T19514 73-78 Protein denotes IL-15
T19513 67-71 Protein denotes CD28

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20006 67-71 http://www.uniprot.org/uniprot/P10747 denotes CD28
T20001 58-61 http://www.uniprot.org/uniprot/P09693 denotes CD3
T19993 58-61 http://www.uniprot.org/uniprot/P07766 denotes CD3
T19985 58-61 http://www.uniprot.org/uniprot/P04234 denotes CD3
T19957 198-203 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T19977 58-61 http://www.uniprot.org/uniprot/P20963 denotes CD3
T20016 73-78 http://www.uniprot.org/uniprot/P40933 denotes IL-15

GO-MF

Id Subject Object Predicate Lexical cue
T19580 73-78 http://purl.obolibrary.org/obo/GO_0016170 denotes IL-15
T19550 198-203 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17

sentences

Id Subject Object Predicate Lexical cue
T18168 0-215 Sentence denotes In view of the fact that NF-κB was also activated by anti-CD3/anti-CD28, IL-15 or mitogens in our experiments, it is most likely that the NF-κB pathway is also actively involved in the induction of IL-17 in RA PBMC.
T190 0-215 Sentence denotes In view of the fact that NF-κB was also activated by anti-CD3/anti-CD28, IL-15 or mitogens in our experiments, it is most likely that the NF-κB pathway is also actively involved in the induction of IL-17 in RA PBMC.

simple1

Id Subject Object Predicate Lexical cue
T19922 198-203 Protein denotes IL-17
T19921 73-78 Protein denotes IL-15
T19920 67-71 Protein denotes CD28

DLUT931

Id Subject Object Predicate Lexical cue
T20280 169-177 Regulation denotes involved
T20279 185-194 Positive_regulation denotes induction
T20224 198-203 Protein denotes IL-17
T20223 73-78 Protein denotes IL-15
T20222 67-71 Protein denotes CD28
R10702 T20224 T20279 themeOf IL-17,induction
R10728 T20279 T20280 themeOf induction,involved

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21837 178-214 Positive_regulation denotes in the induction of IL-17 in RA PBMC
T21836 178-214 Gene_expression denotes in the induction of IL-17 in RA PBMC
T21795 20-30 Protein denotes that NF-κB
T21786 207-214 Entity denotes RA PBMC
T21772 62-71 Protein denotes anti-CD28
T21739 134-151 Protein denotes the NF-κB pathway
T21712 82-90 Entity denotes mitogens
T21695 207-209 Protein denotes RA
T21676 35-61 Protein denotes also activated by anti-CD3
T21618 73-78 Protein denotes IL-15
T21651 195-203 Protein denotes of IL-17
R11931 T21651 T21836 themeOf of IL-17,in the induction of IL-17 in RA PBMC
R11935 T21651 T21837 themeOf of IL-17,in the induction of IL-17 in RA PBMC

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21303 214-215 . denotes .
T21302 210-214 NNP denotes PBMC
T21301 207-209 NNP denotes RA
T21300 204-206 IN denotes in
T21299 198-203 NNP denotes IL-17
T21298 195-197 IN denotes of
T21297 185-194 NN denotes induction
T21296 181-184 DT denotes the
T21295 178-180 IN denotes in
T21294 169-177 VBN denotes involved
T21293 160-168 RB denotes actively
T21292 155-159 RB denotes also
T21291 152-154 VBZ denotes is
T21290 144-151 NN denotes pathway
T21289 138-143 NNP denotes NF-κB
T21288 134-137 DT denotes the
T21287 129-133 IN denotes that
T21286 122-128 JJ denotes likely
T21285 117-121 RBS denotes most
T21284 114-116 VBZ denotes is
T21283 111-113 PRP denotes it
T21282 109-110 , denotes ,
T21281 98-109 NNS denotes experiments
T21280 94-97 PRP$ denotes our
T21279 91-93 IN denotes in
T21278 82-90 NNS denotes mitogens
T21277 79-81 CC denotes or
T21276 73-78 NN denotes IL-15
T21275 71-72 , denotes ,
T21274 62-71 NN denotes anti-CD28
T21273 61-62 NN denotes /
T21272 53-61 JJ denotes anti-CD3
T21271 50-52 IN denotes by
T21270 40-49 VBN denotes activated
T21269 35-39 RB denotes also
T21268 31-34 VBD denotes was
T21267 25-30 NNP denotes NF-κB
T21266 20-24 IN denotes that
T21265 15-19 NN denotes fact
T21264 11-14 DT denotes the
T21263 8-10 IN denotes of
T21262 3-7 NN denotes view
T21261 0-2 IN denotes In
R11619 T21261 T21284 prep In,is
R11620 T21262 T21261 pobj view,In
R11621 T21263 T21262 prep of,view
R11623 T21264 T21265 det the,fact
R11624 T21265 T21263 pobj fact,of
R11626 T21266 T21270 mark that,activated
R11627 T21267 T21270 nsubjpass NF-κB,activated
R11628 T21268 T21270 auxpass was,activated
R11629 T21269 T21270 advmod also,activated
R11630 T21270 T21265 acl activated,fact
R11631 T21271 T21270 agent by,activated
R11632 T21272 T21274 amod anti-CD3,anti-CD28
R11634 T21273 T21274 compound /,anti-CD28
R11635 T21274 T21271 pobj anti-CD28,by
R11636 T21275 T21274 punct ",",anti-CD28
R11637 T21276 T21274 conj IL-15,anti-CD28
R11639 T21277 T21276 cc or,IL-15
R11643 T21278 T21276 conj mitogens,IL-15
R11644 T21279 T21278 prep in,mitogens
R11645 T21280 T21281 poss our,experiments
R11646 T21281 T21279 pobj experiments,in
R11648 T21282 T21284 punct ",",is
R11649 T21283 T21284 nsubj it,is
R11651 T21284 T21284 ROOT is,is
R11652 T21285 T21286 advmod most,likely
R11653 T21286 T21284 acomp likely,is
R11655 T21287 T21294 mark that,involved
R11656 T21288 T21290 det the,pathway
R11657 T21289 T21290 compound NF-κB,pathway
R11658 T21290 T21294 nsubjpass pathway,involved
R11660 T21291 T21294 auxpass is,involved
R11661 T21292 T21294 advmod also,involved
R11662 T21293 T21294 advmod actively,involved
R11664 T21294 T21286 ccomp involved,likely
R11665 T21295 T21294 prep in,involved
R11666 T21296 T21297 det the,induction
R11668 T21297 T21295 pobj induction,in
R11669 T21298 T21297 prep of,induction
R11670 T21299 T21298 pobj IL-17,of
R11672 T21300 T21297 prep in,induction
R11673 T21301 T21302 compound RA,PBMC
R11674 T21302 T21300 pobj PBMC,in
R11676 T21303 T21284 punct .,is

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T19768 169-177 Regulation denotes involved
T19767 169-177 Regulation denotes involved
T19766 185-194 Positive_regulation denotes induction
T19765 185-194 Positive_regulation denotes induction
T19764 40-49 Positive_regulation denotes activated
T19763 40-49 Positive_regulation denotes activated
T19762 40-49 Positive_regulation denotes activated
T19761 207-214 Protein denotes RA PBMC
T19760 198-203 Protein denotes IL-17
T19759 138-143 Protein denotes NF-κB
T19758 73-78 Protein denotes IL-15
T19757 62-71 Protein denotes anti-CD28
T19756 53-61 Protein denotes anti-CD3
T19755 25-30 Protein denotes NF-κB
R10556 T19755 T19762 themeOf NF-κB,activated
R10557 T19755 T19763 themeOf NF-κB,activated
R10558 T19755 T19764 themeOf NF-κB,activated
R10559 T19756 T19762 causeOf anti-CD3,activated
R10560 T19757 T19763 causeOf anti-CD28,activated
R10561 T19758 T19764 causeOf IL-15,activated
R10562 T19759 T19767 causeOf NF-κB,involved
R10563 T19759 T19768 causeOf NF-κB,involved
R10564 T19760 T19765 themeOf IL-17,induction
R10565 T19761 T19766 themeOf RA PBMC,induction
R10566 T19765 T19767 themeOf induction,involved
R10567 T19766 T19768 themeOf induction,involved

testone

Id Subject Object Predicate Lexical cue
T17019 185-194 Positive_regulation denotes induction
T17018 169-177 Regulation denotes involved
T16958 198-203 Protein denotes IL-17
T16957 73-78 Protein denotes IL-15
T16956 67-71 Protein denotes CD28
R9233 T16958 T17019 themeOf IL-17,induction
R9263 T17019 T17018 themeOf induction,involved