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PMC:1064895 / 24418-24616 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T17144 193-197 Protein denotes CD28
T17143 53-58 Protein denotes IL-17
T17142 39-49 Gene_expression denotes production
T17056 193-197 Protein denotes CD28
T17055 53-58 Protein denotes IL-17
R9288 T17143 T17142 themeOf IL-17,production

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20125 39-49 Gene_expression denotes production
T20069 193-197 Protein denotes CD28
T20068 53-58 Protein denotes IL-17
R10607 T20068 T20125 themeOf IL-17,production

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T21949 39-49 Gene_expression denotes production
T21893 193-197 Protein denotes CD28
T21892 53-58 Protein denotes IL-17
R12017 T21892 T21949 themeOf IL-17,production

biosemtest

Id Subject Object Predicate Lexical cue
T18119 41-51 UMLS/C1548180 denotes oduction o
T18084 124-132 UMLS/C0026249 denotes togens a
T18072 109-119 UMLS/C0282554 denotes emokines a
T18028 67-71 UMLS/C1321301 denotes MC r
T17864 55-60 UMLS/C0384648 denotes -17 i
T17772 55-60 UMLS/C1623218 denotes -17 i
T17764 136-140 UMLS/C0205170 denotes ll a
T17740 124-132 UMLS/C0018284 denotes togens a
T17726 161-164 UMLS/C0034790 denotes R)
T17725 144-159 UMLS/C0034790 denotes cell receptor (
T17685 55-60 UMLS/C1825592 denotes -17 i
T17661 35-40 UMLS/C0021135 denotes tro p
T17535 35-40 UMLS/C1533691 denotes tro p
T17976 72-85 UMLS/C1553423 denotes sponding to a
T17966 109-119 UMLS/C1527036 denotes emokines a
T17951 161-164 UMLS/C1167203 denotes R)
T17525 88-95 UMLS/C2346866 denotes riety o
T17441 15-27 UMLS/C1292732 denotes vestigated t
T17383 99-108 UMLS/C1524094 denotes tokines/c
T17353 55-60 UMLS/C1522571 denotes -17 i
T17281 166-174 UMLS/C0023690 denotes gation u
T17277 88-95 UMLS/C1883525 denotes riety o
T17237 99-108 UMLS/C0079189 denotes tokines/c

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T18836 3-12 RB denotes therefore
T18835 0-2 PRP denotes We
T18866 179-197 JJ denotes anti-CD3/anti-CD28
T18865 173-178 VB denotes using
T18864 164-172 NN denotes ligation
T18863 162-163 -RRB- denotes )
T18862 159-162 NN denotes TCR
T18861 158-159 -LRB- denotes (
T18860 149-157 NN denotes receptor
T18859 144-148 NN denotes cell
T18858 142-143 NN denotes T
T18857 139-141 IN denotes as
T18856 134-138 RB denotes well
T18855 131-133 RB denotes as
T18854 122-130 NN denotes mitogens
T18853 118-121 CC denotes and
T18852 97-117 NN denotes cytokines/chemokines
T18851 94-96 IN denotes of
T18850 86-93 NN denotes variety
T18849 84-85 DT denotes a
T18848 81-83 TO denotes to
T18847 70-80 VB denotes responding
T18846 65-69 NN denotes PBMC
T18845 62-64 NN denotes RA
T18844 59-61 IN denotes in
T18843 53-58 NN denotes IL-17
T18842 50-52 IN denotes of
T18841 39-49 NN denotes production
T18840 33-38 FW denotes vitro
T18839 30-32 FW denotes in
T18838 26-29 DT denotes the
T18837 13-25 VB denotes investigated
R9854 T18835 T18837 arg1Of We,investigated
R9855 T18837 T18836 arg1Of investigated,therefore
R9856 T18837 T18865 modOf investigated,using
R9857 T18840 T18839 arg1Of vitro,in
R9858 T18841 T18840 arg1Of production,vitro
R9859 T18841 T18842 arg1Of production,of
R9860 T18841 T18844 arg1Of production,in
R9861 T18841 T18857 arg1Of production,as
R9862 T18843 T18842 arg2Of IL-17,of
R9863 T18846 T18844 arg2Of PBMC,in
R9864 T18846 T18845 arg1Of PBMC,RA
R9865 T18846 T18847 arg1Of PBMC,responding
R9866 T18847 T18848 arg1Of responding,to
R9867 T18850 T18848 arg2Of variety,to
R9868 T18850 T18849 arg1Of variety,a
R9869 T18850 T18851 arg1Of variety,of
R9870 T18852 T18853 arg1Of cytokines/chemokines,and
R9871 T18853 T18851 arg2Of and,of
R9872 T18854 T18853 arg2Of mitogens,and
R9873 T18857 T18837 arg2Of as,investigated
R9874 T18857 T18838 arg1Of as,the
R9875 T18857 T18855 arg1Of as,as
R9876 T18857 T18856 arg1Of as,well
R9877 T18860 T18858 arg1Of receptor,T
R9878 T18860 T18859 arg1Of receptor,cell
R9879 T18860 T18861 arg1Of receptor,(
R9880 T18862 T18861 arg2Of TCR,(
R9881 T18863 T18861 arg3Of ),(
R9882 T18864 T18857 arg2Of ligation,as
R9883 T18864 T18860 arg1Of ligation,receptor
R9884 T18866 T18865 arg2Of anti-CD3/anti-CD28,using

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T19484 193-197 Protein denotes CD28
T19483 53-58 Protein denotes IL-17

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T20004 193-197 http://www.uniprot.org/uniprot/P10747 denotes CD28
T19996 184-187 http://www.uniprot.org/uniprot/P09693 denotes CD3
T19988 184-187 http://www.uniprot.org/uniprot/P07766 denotes CD3
T19944 53-58 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T19972 184-187 http://www.uniprot.org/uniprot/P20963 denotes CD3
T19980 184-187 http://www.uniprot.org/uniprot/P04234 denotes CD3

GO-BP

Id Subject Object Predicate Lexical cue
T18234 159-162 http://purl.obolibrary.org/obo/GO_0006283 denotes TCR

GO-MF

Id Subject Object Predicate Lexical cue
T19537 53-58 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17

GO-CC

Id Subject Object Predicate Lexical cue
T19616 159-162 http://purl.obolibrary.org/obo/GO_0042101 denotes TCR
T19612 144-148 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T18151 0-198 Sentence denotes We therefore investigated the in vitro production of IL-17 in RA PBMC responding to a variety of cytokines/chemokines and mitogens as well as T cell receptor (TCR) ligation using anti-CD3/anti-CD28.
T173 0-198 Sentence denotes We therefore investigated the in vitro production of IL-17 in RA PBMC responding to a variety of cytokines/chemokines and mitogens as well as T cell receptor (TCR) ligation using anti-CD3/anti-CD28.

simple1

Id Subject Object Predicate Lexical cue
T19891 193-197 Protein denotes CD28
T19890 53-58 Protein denotes IL-17

DLUT931

Id Subject Object Predicate Lexical cue
T20250 39-49 Gene_expression denotes production
T20193 193-197 Protein denotes CD28
T20192 53-58 Protein denotes IL-17
R10678 T20192 T20250 themeOf IL-17,production

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21834 142-164 Localization denotes T cell receptor (TCR)
T21824 39-69 Gene_expression denotes production of IL-17 in RA PBMC
T21782 97-117 Protein denotes cytokines/chemokines
T21774 188-197 Protein denotes anti-CD28
T21768 122-187 Entity denotes mitogens as well as T cell receptor (TCR) ligation using anti-CD3
T21765 159-162 Protein denotes TCR
T21746 50-58 Protein denotes of IL-17
T21728 62-64 Protein denotes RA
T21723 142-163 Protein denotes T cell receptor (TCR)
T21721 62-69 Entity denotes RA PBMC
T21709 97-117 Protein denotes cytokines/chemokines
T21687 142-148 Entity denotes T cell
T21669 107-117 Protein denotes chemokines
T21641 179-187 Protein denotes anti-CD3
R11964 T21687 T21834 locationOf T cell,T cell receptor (TCR)
R11988 T21723 T21834 themeOf T cell receptor (TCR),T cell receptor (TCR)
R11995 T21746 T21824 themeOf of IL-17,production of IL-17 in RA PBMC

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20850 197-198 . denotes .
T20849 188-197 NN denotes anti-CD28
T20848 187-188 NN denotes /
T20847 179-187 JJ denotes anti-CD3
T20846 173-178 VBG denotes using
T20845 164-172 NN denotes ligation
T20844 162-163 -RRB- denotes )
T20843 159-162 NNP denotes TCR
T20842 158-159 -LRB- denotes (
T20841 149-157 NN denotes receptor
T20840 144-148 NN denotes cell
T20839 142-143 NNP denotes T
T20838 139-141 IN denotes as
T20837 134-138 RB denotes well
T20836 131-133 RB denotes as
T20835 122-130 NNS denotes mitogens
T20834 118-121 CC denotes and
T20833 97-117 NNS denotes cytokines/chemokines
T20832 94-96 IN denotes of
T20831 86-93 NN denotes variety
T20830 84-85 DT denotes a
T20829 81-83 TO denotes to
T20828 70-80 VBG denotes responding
T20827 65-69 NNP denotes PBMC
T20826 62-64 NNP denotes RA
T20825 59-61 IN denotes in
T20824 53-58 NNP denotes IL-17
T20823 50-52 IN denotes of
T20822 39-49 NN denotes production
T20821 33-38 NN denotes vitro
T20820 30-32 IN denotes in
T20819 26-29 DT denotes the
T20818 13-25 VBD denotes investigated
T20817 3-12 RB denotes therefore
T20816 0-2 PRP denotes We
R11136 T20816 T20818 nsubj We,investigated
R11138 T20817 T20818 advmod therefore,investigated
R11139 T20818 T20818 ROOT investigated,investigated
R11140 T20819 T20828 det the,responding
R11142 T20820 T20828 prep in,responding
R11143 T20821 T20822 amod vitro,production
R11144 T20822 T20820 pobj production,in
R11146 T20823 T20822 prep of,production
R11147 T20824 T20823 pobj IL-17,of
R11148 T20825 T20822 prep in,production
R11150 T20826 T20827 compound RA,PBMC
R11151 T20827 T20825 pobj PBMC,in
R11152 T20828 T20818 dobj responding,investigated
R11154 T20829 T20828 prep to,responding
R11155 T20830 T20831 det a,variety
R11156 T20831 T20829 pobj variety,to
R11158 T20832 T20831 prep of,variety
R11159 T20833 T20832 pobj cytokines/chemokines,of
R11160 T20834 T20833 cc and,cytokines/chemokines
R11162 T20835 T20833 conj mitogens,cytokines/chemokines
R11163 T20836 T20838 advmod as,as
R11165 T20837 T20838 advmod well,as
R11166 T20838 T20833 cc as,cytokines/chemokines
R11167 T20839 T20841 compound T,receptor
R11169 T20840 T20841 compound cell,receptor
R11170 T20841 T20845 nsubj receptor,ligation
R11171 T20842 T20843 punct (,TCR
R11172 T20843 T20841 appos TCR,receptor
R11173 T20844 T20841 punct ),receptor
R11174 T20845 T20818 ccomp ligation,investigated
R11175 T20846 T20818 advcl using,investigated
R11177 T20847 T20849 amod anti-CD3,anti-CD28
R11179 T20848 T20849 compound /,anti-CD28
R11183 T20849 T20846 dobj anti-CD28,using
R11185 T20850 T20818 punct .,investigated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T19664 164-172 Binding denotes ligation
T19663 164-172 Binding denotes ligation
T19662 39-49 Gene_expression denotes production
T19661 39-49 Gene_expression denotes production
T19660 188-197 Protein denotes anti-CD28
T19659 184-187 Protein denotes CD3
T19658 159-162 Protein denotes TCR
T19657 142-157 Protein denotes T cell receptor
T19656 62-69 Protein denotes RA PBMC
T19655 53-58 Protein denotes IL-17
R10495 T19655 T19661 themeOf IL-17,production
R10496 T19656 T19662 themeOf RA PBMC,production
R10497 T19657 T19663 themeOf T cell receptor,ligation
R10498 T19658 T19664 themeOf TCR,ligation

testone

Id Subject Object Predicate Lexical cue
T16984 39-49 Gene_expression denotes production
T16927 193-197 Protein denotes CD28
T16926 53-58 Protein denotes IL-17
R9211 T16926 T16984 themeOf IL-17,production