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PMC:1064895 / 24233-24417 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T17141 165-175 Gene_expression denotes production
T17140 159-164 Protein denotes IL-17
T17139 150-158 Regulation denotes regulate
T17054 159-164 Protein denotes IL-17
T17053 124-129 Protein denotes IL-23
T17052 114-119 Protein denotes IL-15
T17051 65-70 Protein denotes IL-17
T17138 124-129 Protein denotes IL-23
T17137 114-119 Protein denotes IL-15
T17136 71-81 Gene_expression denotes production
T17135 65-70 Protein denotes IL-17
T17134 55-64 Positive_regulation denotes stimulate
R9283 T17135 T17136 themeOf IL-17,production
R9284 T17136 T17134 themeOf production,stimulate
R9285 T17138 T17134 causeOf IL-23,stimulate
R9286 T17140 T17141 themeOf IL-17,production
R9287 T17141 T17139 themeOf production,regulate

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T20124 150-158 Regulation denotes regulate
T20123 55-64 Positive_regulation denotes stimulate
T20122 71-81 Gene_expression denotes production
T20121 165-175 Gene_expression denotes production
T20067 159-164 Protein denotes IL-17
T20066 124-129 Protein denotes IL-23
T20065 114-119 Protein denotes IL-15
T20064 65-70 Protein denotes IL-17
R10605 T20064 T20122 themeOf IL-17,production
R10606 T20067 T20121 themeOf IL-17,production
R10642 T20121 T20124 themeOf production,regulate
R10643 T20122 T20123 themeOf production,stimulate

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T21948 150-158 Regulation denotes regulate
T21947 71-81 Gene_expression denotes production
T21946 55-64 Positive_regulation denotes stimulate
T21945 165-175 Gene_expression denotes production
T21891 159-164 Protein denotes IL-17
T21890 124-129 Protein denotes IL-23
T21889 114-119 Protein denotes IL-15
T21888 65-70 Protein denotes IL-17
R12005 T21945 T21948 themeOf production,regulate
R12008 T21945 T21948 themeOf production,regulate
R12010 T21947 T21946 themeOf production,stimulate
R12012 T21888 T21947 themeOf IL-17,production
R12013 T21889 T21948 causeOf IL-15,regulate
R12015 T21890 T21948 causeOf IL-23,regulate
R12016 T21891 T21945 themeOf IL-17,production

2_test

Id Subject Object Predicate Lexical cue
15642134-10679127-4202040 177-179 10679127 denotes 13
15642134-12707317-4202041 180-182 12707317 denotes 14

biosemtest

Id Subject Object Predicate Lexical cue
T18111 161-177 UMLS/C1819444 denotes -17 production [
T18110 67-83 UMLS/C1819444 denotes -17 production i
T18101 45-51 UMLS/C1551364 denotes ents t
T18097 152-160 UMLS/C0851285 denotes gulate I
T18057 126-131 UMLS/C1881122 denotes -23)
T18046 45-51 UMLS/C1521826 denotes ents t
T17750 126-131 UMLS/C0963088 denotes -23)
T17673 143-148 UMLS/C0205309 denotes own t
T17561 126-131 UMLS/C1423526 denotes -23)
T17549 23-27 UMLS/C1511726 denotes ta a
T17937 57-66 UMLS/C1948023 denotes imulate I
T17501 19-22 UMLS/C0205388 denotes w d
T17463 45-51 UMLS/C1254351 denotes ents t
T17450 116-121 UMLS/C1149222 denotes -15 a
T17443 126-131 UMLS/C1149233 denotes -23)
T17436 116-121 UMLS/C0254610 denotes -15 a
T17403 116-121 UMLS/C1334105 denotes -15 a
T17396 28-37 UMLS/C0470187 denotes ailable o
T17382 105-114 UMLS/C1524094 denotes tokines (
T17330 45-51 UMLS/C0450442 denotes ents t
T17283 149-151 UMLS/C0319022 denotes r
T17236 105-114 UMLS/C0079189 denotes tokines (

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T18834 182-183 -RRB- denotes ]
T18833 177-182 CD denotes 13,14
T18832 176-177 -LRB- denotes [
T18831 165-175 NN denotes production
T18830 159-164 NN denotes IL-17
T18829 150-158 VB denotes regulate
T18828 147-149 TO denotes to
T18827 141-146 VB denotes known
T18826 136-140 VB denotes been
T18825 131-135 VB denotes have
T18824 129-130 -RRB- denotes )
T18823 124-129 NN denotes IL-23
T18822 120-123 CC denotes and
T18821 114-119 NN denotes IL-15
T18820 113-114 -LRB- denotes (
T18819 103-112 NN denotes cytokines
T18818 98-102 DT denotes some
T18817 89-97 IN denotes although
T18816 87-88 -COMMA- denotes ,
T18815 85-87 NN denotes RA
T18814 82-84 IN denotes in
T18813 71-81 NN denotes production
T18812 65-70 NN denotes IL-17
T18811 55-64 VB denotes stimulate
T18810 50-54 WDT denotes that
T18809 43-49 NN denotes agents
T18808 39-42 DT denotes the
T18807 36-38 IN denotes on
T18806 26-35 JJ denotes available
T18805 21-25 NN denotes data
T18804 17-20 JJ denotes few
T18803 13-16 RB denotes yet
T18802 10-12 RB denotes as
T18801 6-9 VB denotes are
T18800 0-5 EX denotes There
R9817 T18800 T18801 arg1Of There,are
R9818 T18804 T18802 arg1Of few,as
R9819 T18804 T18803 arg1Of few,yet
R9820 T18805 T18801 arg2Of data,are
R9821 T18805 T18804 arg1Of data,few
R9822 T18805 T18806 arg1Of data,available
R9823 T18806 T18807 arg1Of available,on
R9824 T18809 T18807 arg2Of agents,on
R9825 T18809 T18808 arg1Of agents,the
R9826 T18809 T18810 arg1Of agents,that
R9827 T18809 T18811 arg1Of agents,stimulate
R9828 T18811 T18816 arg1Of stimulate,","
R9829 T18811 T18817 arg1Of stimulate,although
R9830 T18813 T18811 arg2Of production,stimulate
R9831 T18813 T18812 arg1Of production,IL-17
R9832 T18813 T18814 arg1Of production,in
R9833 T18815 T18814 arg2Of RA,in
R9834 T18819 T18818 arg1Of cytokines,some
R9835 T18819 T18820 arg1Of cytokines,(
R9836 T18819 T18825 arg1Of cytokines,have
R9837 T18819 T18826 arg1Of cytokines,been
R9838 T18819 T18827 arg2Of cytokines,known
R9839 T18819 T18829 arg1Of cytokines,regulate
R9840 T18821 T18822 arg1Of IL-15,and
R9841 T18822 T18820 arg2Of and,(
R9842 T18823 T18822 arg2Of IL-23,and
R9843 T18824 T18820 arg3Of ),(
R9844 T18827 T18817 arg2Of known,although
R9845 T18827 T18825 arg2Of known,have
R9846 T18827 T18826 arg2Of known,been
R9847 T18829 T18827 arg3Of regulate,known
R9848 T18829 T18828 arg1Of regulate,to
R9849 T18829 T18832 arg1Of regulate,[
R9850 T18831 T18829 arg2Of production,regulate
R9851 T18831 T18830 arg1Of production,IL-17
R9852 T18833 T18832 arg2Of "13,14",[
R9853 T18834 T18832 arg3Of ],[

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T19451 124-129 Antecedent denotes IL-23
T19450 114-119 Antecedent denotes IL-15
T19449 98-112 Anaphor denotes some cytokines
R10479 T19449 T19450 boundBy some cytokines,IL-15
R10480 T19449 T19451 boundBy some cytokines,IL-23

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T19482 159-164 Protein denotes IL-17
T19481 124-129 Protein denotes IL-23
T19480 114-119 Protein denotes IL-15
T19479 65-70 Protein denotes IL-17

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T19943 159-164 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T19942 65-70 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T20012 114-119 http://www.uniprot.org/uniprot/P40933 denotes IL-15

GO-BP

Id Subject Object Predicate Lexical cue
T18194 159-175 http://purl.obolibrary.org/obo/GO_0032620 denotes IL-17 production
T18193 65-81 http://purl.obolibrary.org/obo/GO_0032620 denotes IL-17 production
T18180 159-175 http://purl.obolibrary.org/obo/GO_0032660 denotes IL-17 production
T18179 65-81 http://purl.obolibrary.org/obo/GO_0032660 denotes IL-17 production

GO-MF

Id Subject Object Predicate Lexical cue
T19576 114-119 http://purl.obolibrary.org/obo/GO_0016170 denotes IL-15
T19561 124-129 http://purl.obolibrary.org/obo/GO_0045519 denotes IL-23
T19536 159-164 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T19535 65-70 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17

sentences

Id Subject Object Predicate Lexical cue
T18150 0-184 Sentence denotes There are as yet few data available on the agents that stimulate IL-17 production in RA, although some cytokines (IL-15 and IL-23) have been known to regulate IL-17 production [13,14].
T172 0-184 Sentence denotes There are as yet few data available on the agents that stimulate IL-17 production in RA, although some cytokines (IL-15 and IL-23) have been known to regulate IL-17 production [13,14].

simple1

Id Subject Object Predicate Lexical cue
T19889 159-164 Protein denotes IL-17
T19888 124-129 Protein denotes IL-23
T19887 114-119 Protein denotes IL-15
T19886 65-70 Protein denotes IL-17

DLUT931

Id Subject Object Predicate Lexical cue
T20249 150-158 Regulation denotes regulate
T20248 55-64 Positive_regulation denotes stimulate
T20247 165-175 Gene_expression denotes production
T20246 71-81 Gene_expression denotes production
T20191 159-164 Protein denotes IL-17
T20190 124-129 Protein denotes IL-23
T20189 114-119 Protein denotes IL-15
T20188 65-70 Protein denotes IL-17
R10676 T20188 T20246 themeOf IL-17,production
R10677 T20191 T20247 themeOf IL-17,production
R10712 T20246 T20248 themeOf production,stimulate
R10713 T20247 T20249 themeOf production,regulate

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21847 159-183 Gene_expression denotes IL-17 production [13,14]
T21818 98-183 Regulation denotes some cytokines (IL-15 and IL-23) have been known to regulate IL-17 production [13,14]
T21816 65-88 Gene_expression denotes IL-17 production in RA,
T21803 114-119 Protein denotes IL-15
T21792 65-70 Protein denotes IL-17
T21787 124-129 Protein denotes IL-23
T21741 159-164 Protein denotes IL-17
T21690 98-130 Protein denotes some cytokines (IL-15 and IL-23)
T21675 85-87 Protein denotes RA
R11965 T21792 T21816 themeOf IL-17,"IL-17 production in RA,"
R11971 T21690 T21818 causeOf some cytokines (IL-15 and IL-23),"some cytokines (IL-15 and IL-23) have been known to regulate IL-17 production [13,14]"
R11987 T21847 T21818 themeOf "IL-17 production [13,14]","some cytokines (IL-15 and IL-23) have been known to regulate IL-17 production [13,14]"
R11992 T21741 T21847 themeOf IL-17,"IL-17 production [13,14]"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20815 183-184 . denotes .
T20814 182-183 NNP denotes ]
T20813 177-182 CD denotes 13,14
T20812 176-177 NNP denotes [
T20811 165-175 NN denotes production
T20810 159-164 JJ denotes IL-17
T20809 150-158 VB denotes regulate
T20808 147-149 TO denotes to
T20807 141-146 VBN denotes known
T20806 136-140 VBN denotes been
T20805 131-135 VBP denotes have
T20804 129-130 -RRB- denotes )
T20803 124-129 NN denotes IL-23
T20802 120-123 CC denotes and
T20801 114-119 NN denotes IL-15
T20800 113-114 -LRB- denotes (
T20799 103-112 NNS denotes cytokines
T20798 98-102 DT denotes some
T20797 89-97 IN denotes although
T20796 87-88 , denotes ,
T20795 85-87 NNP denotes RA
T20794 82-84 IN denotes in
T20793 71-81 NN denotes production
T20792 65-70 JJ denotes IL-17
T20791 55-64 VBP denotes stimulate
T20790 50-54 WDT denotes that
T20789 43-49 NNS denotes agents
T20788 39-42 DT denotes the
T20787 36-38 IN denotes on
T20786 26-35 JJ denotes available
T20785 21-25 NNS denotes data
T20784 17-20 JJ denotes few
T20783 13-16 RB denotes yet
T20782 10-12 RB denotes as
T20781 6-9 VBP denotes are
T20780 0-5 EX denotes There
R11089 T20780 T20781 expl There,are
R11090 T20781 T20781 ROOT are,are
R11091 T20782 T20784 advmod as,few
R11093 T20783 T20784 advmod yet,few
R11094 T20784 T20785 nummod few,data
R11096 T20785 T20781 attr data,are
R11097 T20786 T20785 amod available,data
R11098 T20787 T20786 prep on,available
R11100 T20788 T20789 det the,agents
R11101 T20789 T20787 pobj agents,on
R11102 T20790 T20791 nsubj that,stimulate
R11104 T20791 T20789 relcl stimulate,agents
R11105 T20792 T20793 amod IL-17,production
R11106 T20793 T20791 dobj production,stimulate
R11108 T20794 T20793 prep in,production
R11109 T20795 T20794 pobj RA,in
R11111 T20796 T20781 punct ",",are
R11112 T20797 T20807 mark although,known
R11114 T20798 T20799 det some,cytokines
R11115 T20799 T20807 nsubjpass cytokines,known
R11117 T20800 T20801 punct (,IL-15
R11118 T20801 T20799 appos IL-15,cytokines
R11119 T20802 T20801 cc and,IL-15
R11121 T20803 T20801 conj IL-23,IL-15
R11122 T20804 T20799 punct ),cytokines
R11123 T20805 T20807 aux have,known
R11124 T20806 T20807 auxpass been,known
R11125 T20807 T20781 advcl known,are
R11126 T20808 T20809 aux to,regulate
R11127 T20809 T20807 xcomp regulate,known
R11128 T20810 T20811 compound IL-17,production
R11130 T20811 T20809 dobj production,regulate
R11131 T20812 T20814 nmod [,]
R11132 T20813 T20814 nummod "13,14",]
R11134 T20814 T20781 attr ],are
R11135 T20815 T20781 punct .,are

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T19654 55-64 Positive_regulation denotes stimulate
T19653 71-81 Gene_expression denotes production
T19652 65-70 Protein denotes IL-17
R10493 T19652 T19653 themeOf IL-17,production
R10494 T19653 T19654 themeOf production,stimulate

testone

Id Subject Object Predicate Lexical cue
T16983 165-175 Gene_expression denotes production
T16982 150-158 Regulation denotes regulate
T16981 71-81 Gene_expression denotes production
T16980 55-64 Positive_regulation denotes stimulate
T16925 159-164 Protein denotes IL-17
T16924 124-129 Protein denotes IL-23
T16923 114-119 Protein denotes IL-15
T16922 65-70 Protein denotes IL-17
R9208 T16922 T16981 themeOf IL-17,production
R9209 T16924 T16982 causeOf IL-23,regulate
R9210 T16925 T16983 themeOf IL-17,production
R9244 T16981 T16980 themeOf production,stimulate
R9245 T16983 T16982 themeOf production,regulate