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PMC:1064895 / 17993-18126 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T13344 36-46 Gene_expression denotes production
T13343 30-35 Protein denotes IL-17
T13342 20-29 Positive_regulation denotes increased
T13331 30-35 Protein denotes IL-17
R7273 T13343 T13344 themeOf IL-17,production
R7274 T13344 T13342 themeOf production,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13960 20-29 Positive_regulation denotes increased
T13959 36-46 Gene_expression denotes production
T13949 30-35 Protein denotes IL-17
R7590 T13949 T13959 themeOf IL-17,production
R7599 T13959 T13960 themeOf production,increased

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14382 36-46 Gene_expression denotes production
T14381 20-29 Positive_regulation denotes increased
T14371 30-35 Protein denotes IL-17
R7938 T14371 T14382 themeOf IL-17,production
R7947 T14382 T14381 themeOf production,increased

biosemtest

Id Subject Object Predicate Lexical cue
T13518 30-46 UMLS/C1819444 denotes IL-17 production
T13511 79-83 UMLS/C0205309 denotes know
T13457 20-29 UMLS/C0205217 denotes increased
T13448 53-57 UMLS/C1321301 denotes PBMC
T13445 124-132 UMLS/C1314939 denotes involved
T13429 90-118 UMLS/C0086982 denotes signal transduction pathways
T13424 124-132 UMLS/C1947935 denotes involved
T13413 7-15 UMLS/C1441672 denotes observed
T13393 76-78 UMLS/C0319022 denotes to
T13383 20-29 UMLS/C0442805 denotes increased
T13381 20-29 UMLS/C0442808 denotes increased

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13622 76-78 TO denotes to
T13621 66-75 JJ denotes important
T13620 62-65 VB denotes was
T13619 59-61 PRP denotes it
T13618 57-58 -COMMA- denotes ,
T13617 53-57 NN denotes PBMC
T13616 50-52 NN denotes RA
T13615 47-49 IN denotes in
T13614 36-46 NN denotes production
T13613 30-35 NN denotes IL-17
T13612 20-29 VB denotes increased
T13611 16-19 DT denotes the
T13610 7-15 VB denotes observed
T13609 0-6 VB denotes Having
T13629 124-132 VB denotes involved
T13628 119-123 VB denotes were
T13627 110-118 NN denotes pathways
T13626 97-109 NN denotes transduction
T13625 90-96 NN denotes signal
T13624 84-89 WDT denotes which
T13623 79-83 VB denotes know
R7318 T13610 T13609 arg2Of observed,Having
R7319 T13614 T13610 arg2Of production,observed
R7320 T13614 T13611 arg1Of production,the
R7321 T13614 T13612 arg2Of production,increased
R7322 T13614 T13613 arg1Of production,IL-17
R7323 T13614 T13615 arg1Of production,in
R7324 T13617 T13615 arg2Of PBMC,in
R7325 T13617 T13616 arg1Of PBMC,RA
R7326 T13620 T13609 modOf was,Having
R7327 T13620 T13618 arg1Of was,","
R7328 T13621 T13620 arg2Of important,was
R7329 T13623 T13609 arg1Of know,Having
R7330 T13623 T13610 arg1Of know,observed
R7331 T13623 T13619 arg1Of know,it
R7332 T13623 T13620 arg1Of know,was
R7333 T13623 T13621 arg1Of know,important
R7334 T13623 T13622 arg1Of know,to
R7335 T13624 T13623 arg2Of which,know
R7336 T13627 T13624 arg1Of pathways,which
R7337 T13627 T13625 arg1Of pathways,signal
R7338 T13627 T13626 arg1Of pathways,transduction
R7339 T13627 T13628 arg1Of pathways,were
R7340 T13627 T13629 arg2Of pathways,involved
R7341 T13629 T13628 arg2Of involved,were

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T13846 30-35 Protein denotes IL-17

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13929 30-35 http://www.uniprot.org/uniprot/Q16552 denotes IL-17

GO-BP

Id Subject Object Predicate Lexical cue
T13558 90-118 http://purl.obolibrary.org/obo/GO_0035556 denotes signal transduction pathways
T13557 90-118 http://purl.obolibrary.org/obo/GO_0036499 denotes signal transduction pathways
T13556 90-118 http://purl.obolibrary.org/obo/GO_0036500 denotes signal transduction pathways
T13555 90-118 http://purl.obolibrary.org/obo/GO_0036498 denotes signal transduction pathways
T13554 97-109 http://purl.obolibrary.org/obo/GO_0009293 denotes transduction
T13552 90-109 http://purl.obolibrary.org/obo/GO_0007165 denotes signal transduction
T13550 90-96 http://purl.obolibrary.org/obo/GO_0023052 denotes signal
T13544 30-46 http://purl.obolibrary.org/obo/GO_0032620 denotes IL-17 production
T13538 30-46 http://purl.obolibrary.org/obo/GO_0032660 denotes IL-17 production

GO-MF

Id Subject Object Predicate Lexical cue
T13855 30-35 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17

sentences

Id Subject Object Predicate Lexical cue
T13529 0-133 Sentence denotes Having observed the increased IL-17 production in RA PBMC, it was important to know which signal transduction pathways were involved.
T130 0-133 Sentence denotes Having observed the increased IL-17 production in RA PBMC, it was important to know which signal transduction pathways were involved.

simple1

Id Subject Object Predicate Lexical cue
T13920 30-35 Protein denotes IL-17

DLUT931

Id Subject Object Predicate Lexical cue
T13987 20-29 Positive_regulation denotes increased
T13986 36-46 Gene_expression denotes production
T13976 30-35 Protein denotes IL-17
R7608 T13976 T13986 themeOf IL-17,production
R7616 T13986 T13987 themeOf production,increased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14367 16-58 Positive_regulation denotes the increased IL-17 production in RA PBMC,
T14359 0-58 Gene_expression denotes Having observed the increased IL-17 production in RA PBMC,
T14338 50-57 Entity denotes RA PBMC
T14329 30-35 Protein denotes IL-17
T14328 50-52 Protein denotes RA
R7924 T14329 T14359 themeOf IL-17,"Having observed the increased IL-17 production in RA PBMC,"
R7933 T14359 T14367 themeOf "Having observed the increased IL-17 production in RA PBMC,","the increased IL-17 production in RA PBMC,"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14051 132-133 . denotes .
T14050 124-132 VBN denotes involved
T14049 119-123 VBD denotes were
T14048 110-118 NNS denotes pathways
T14047 97-109 NN denotes transduction
T14046 90-96 NN denotes signal
T14045 84-89 WDT denotes which
T14044 79-83 VB denotes know
T14043 76-78 TO denotes to
T14042 66-75 JJ denotes important
T14041 62-65 VBD denotes was
T14040 59-61 PRP denotes it
T14039 57-58 , denotes ,
T14038 53-57 NNP denotes PBMC
T14037 50-52 NNP denotes RA
T14036 47-49 IN denotes in
T14035 36-46 NN denotes production
T14034 30-35 NN denotes IL-17
T14033 20-29 VBN denotes increased
T14032 16-19 DT denotes the
T14031 7-15 VBN denotes observed
T14030 0-6 VBG denotes Having
R7646 T14030 T14031 aux Having,observed
R7647 T14031 T14041 ccomp observed,was
R7648 T14032 T14035 det the,production
R7649 T14033 T14035 amod increased,production
R7650 T14034 T14035 compound IL-17,production
R7651 T14035 T14031 dobj production,observed
R7652 T14036 T14035 prep in,production
R7653 T14037 T14038 compound RA,PBMC
R7654 T14038 T14036 pobj PBMC,in
R7655 T14039 T14041 punct ",",was
R7656 T14040 T14041 nsubj it,was
R7657 T14041 T14041 ROOT was,was
R7658 T14042 T14041 acomp important,was
R7659 T14043 T14044 aux to,know
R7660 T14044 T14041 xcomp know,was
R7661 T14045 T14046 nsubj which,signal
R7662 T14046 T14048 nmod signal,pathways
R7663 T14047 T14048 compound transduction,pathways
R7664 T14048 T14050 nsubjpass pathways,involved
R7665 T14049 T14050 auxpass were,involved
R7666 T14050 T14044 ccomp involved,know
R7667 T14051 T14041 punct .,was

testone

Id Subject Object Predicate Lexical cue
T13314 36-46 Gene_expression denotes production
T13313 20-29 Positive_regulation denotes increased
T13303 30-35 Protein denotes IL-17
R7253 T13303 T13314 themeOf IL-17,production
R7261 T13314 T13313 themeOf production,increased