PMC:1064895 / 14951-15296
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
15642134-9187742-4202027 | 341-343 | 9187742 | denotes | 21 |
biosemtest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10770 | 280-286 | UMLS/C0449788 | denotes | umber |
T10769 | 171-179 | UMLS/C1442770 | denotes | 24 hours |
T10768 | 73-75 | UMLS/C0319022 | denotes | to |
T10767 | 171-179 | UMLS/C0456696 | denotes | 24 hours |
T10766 | 171-179 | UMLS/C0439584 | denotes | 24 hours |
T10765 | 150-155 | UMLS/C0687676 | denotes | After |
T10764 | 156-166 | UMLS/C1979572 | denotes | incubation |
T10763 | 214-224 | UMLS/C1549488 | denotes | percentage |
T10762 | 109-118 | UMLS/C1511636 | denotes | cytotoxic |
T10761 | 57-63 | UMLS/C0025664 | denotes | method |
T10760 | 57-63 | UMLS/C0025663 | denotes | method |
T10759 | 196-205 | UMLS/C1512335 | denotes | harvested |
T10758 | 264-271 | UMLS/C1705501 | denotes | formula |
T10757 | 19-25 | UMLS/C0005507 | denotes | assays |
T10755 | 214-224 | UMLS/C0439165 | denotes | percentage |
T10754 | 89-98 | UMLS/C0035647 | denotes | potential |
T10821 | 334-339 | UMLS/C1704653 | denotes | ells) |
T10820 | 185-190 | UMLS/C1704653 | denotes | cells |
T10819 | 143-148 | UMLS/C1704653 | denotes | cells |
T10818 | 57-63 | UMLS/C0449851 | denotes | method |
T10817 | 214-224 | UMLS/C1561533 | denotes | percentage |
T10816 | 102-108 | UMLS/C1552596 | denotes | direct |
T10815 | 280-286 | UMLS/C1709287 | denotes | umber |
T10814 | 290-302 | UMLS/C1441322 | denotes | iable cells/ |
T10813 | 156-166 | UMLS/C1980044 | denotes | incubation |
T10812 | 297-309 | UMLS/C0007584 | denotes | ells/number |
T10811 | 109-118 | UMLS/C0677881 | denotes | cytotoxic |
T10810 | 129-139 | UMLS/C0243077 | denotes | inhibitors |
T10809 | 19-25 | UMLS/C0243073 | denotes | assays |
T10807 | 318-324 | UMLS/C0443348 | denotes | iable |
T10806 | 76-84 | UMLS/C0220825 | denotes | evaluate |
T10805 | 244-254 | UMLS/C1443182 | denotes | calculated |
T10804 | 334-339 | UMLS/C1136359 | denotes | ells) |
T10803 | 185-190 | UMLS/C1136359 | denotes | cells |
T10802 | 143-148 | UMLS/C1136359 | denotes | cells |
T10801 | 19-25 | UMLS/C1510438 | denotes | assays |
T10799 | 150-155 | UMLS/C0231290 | denotes | After |
T10798 | 119-125 | UMLS/C2348382 | denotes | effect |
T10797 | 31-42 | UMLS/C0041213 | denotes | trypan blue |
T10795 | 43-46 | UMLS/C0013343 | denotes | dye |
T10793 | 102-108 | UMLS/C0439851 | denotes | direct |
T10792 | 102-108 | UMLS/C1947931 | denotes | direct |
T10791 | 334-339 | UMLS/C1948049 | denotes | ells) |
T10790 | 185-190 | UMLS/C1948049 | denotes | cells |
T10789 | 143-148 | UMLS/C1948049 | denotes | cells |
T10788 | 129-139 | UMLS/C1999216 | denotes | inhibitors |
T10787 | 280-286 | UMLS/C1554106 | denotes | umber |
T10786 | 334-339 | UMLS/C0007634 | denotes | ells) |
T10785 | 185-190 | UMLS/C0007634 | denotes | cells |
T10784 | 143-148 | UMLS/C0007634 | denotes | cells |
T10783 | 334-339 | UMLS/C1269647 | denotes | ells) |
T10782 | 185-190 | UMLS/C1269647 | denotes | cells |
T10781 | 143-148 | UMLS/C1269647 | denotes | cells |
T10780 | 225-239 | UMLS/C0007620 | denotes | cell viability |
T10779 | 4-18 | UMLS/C0007620 | denotes | cell viability |
T10777 | 119-125 | UMLS/C1280500 | denotes | effect |
T10776 | 280-286 | UMLS/C0237753 | denotes | umber |
T10775 | 244-254 | UMLS/C1441506 | denotes | calculated |
T10774 | 244-254 | UMLS/C0444686 | denotes | calculated |
T10773 | 264-271 | UMLS/C0489829 | denotes | formula |
T10772 | 47-56 | UMLS/C0680251 | denotes | exclusion |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10895 | 343-344 | -RRB- | denotes | ] |
T10894 | 341-343 | CD | denotes | 21 |
T10893 | 340-341 | -LRB- | denotes | [ |
T10892 | 338-339 | -RRB- | denotes | ) |
T10891 | 333-338 | NN | denotes | cells |
T10890 | 328-332 | JJ | denotes | dead |
T10889 | 324-327 | CC | denotes | and |
T10888 | 317-323 | JJ | denotes | viable |
T10887 | 312-316 | CC | denotes | both |
T10886 | 309-311 | IN | denotes | of |
T10885 | 296-308 | NN | denotes | cells/number |
T10884 | 289-295 | JJ | denotes | viable |
T10883 | 286-288 | IN | denotes | of |
T10882 | 279-285 | NN | denotes | number |
T10881 | 278-279 | -LRB- | denotes | ( |
T10880 | 276-277 | NN | denotes | × |
T10879 | 272-275 | CD | denotes | 100 |
T10878 | 264-271 | NN | denotes | formula |
T10877 | 260-263 | DT | denotes | the |
T10876 | 255-259 | IN | denotes | with |
T10875 | 244-254 | VB | denotes | calculated |
T10874 | 240-243 | VB | denotes | was |
T10873 | 230-239 | NN | denotes | viability |
T10872 | 225-229 | NN | denotes | cell |
T10871 | 214-224 | NN | denotes | percentage |
T10870 | 210-213 | DT | denotes | the |
T10869 | 206-209 | CC | denotes | and |
T10868 | 196-205 | VB | denotes | harvested |
T10867 | 191-195 | VB | denotes | were |
T10866 | 185-190 | NN | denotes | cells |
T10865 | 181-184 | DT | denotes | the |
T10864 | 179-180 | -COMMA- | denotes | , |
T10863 | 174-179 | NN | denotes | hours |
T10862 | 171-173 | CD | denotes | 24 |
T10861 | 167-170 | IN | denotes | for |
T10860 | 156-166 | NN | denotes | incubation |
T10859 | 150-155 | IN | denotes | After |
T10858 | 143-148 | NN | denotes | cells |
T10857 | 140-142 | IN | denotes | on |
T10856 | 129-139 | NN | denotes | inhibitors |
T10855 | 126-128 | IN | denotes | of |
T10854 | 119-125 | NN | denotes | effect |
T10853 | 109-118 | JJ | denotes | cytotoxic |
T10852 | 102-108 | JJ | denotes | direct |
T10851 | 99-101 | IN | denotes | of |
T10850 | 89-98 | NN | denotes | potential |
T10849 | 85-88 | DT | denotes | the |
T10848 | 76-84 | VB | denotes | evaluate |
T10847 | 73-75 | TO | denotes | to |
T10846 | 68-72 | VB | denotes | used |
T10845 | 64-67 | VB | denotes | was |
T10844 | 57-63 | NN | denotes | method |
T10843 | 47-56 | NN | denotes | exclusion |
T10842 | 43-46 | NN | denotes | dye |
T10841 | 38-42 | JJ | denotes | blue |
T10840 | 31-37 | NN | denotes | trypan |
T10839 | 27-30 | DT | denotes | the |
T10838 | 25-26 | -COMMA- | denotes | , |
T10837 | 19-25 | NN | denotes | assays |
T10836 | 9-18 | NN | denotes | viability |
T10835 | 4-8 | NN | denotes | cell |
T10834 | 0-3 | IN | denotes | For |
R5792 | T10837 | T10834 | arg2Of | assays,For |
R5793 | T10837 | T10835 | arg1Of | assays,cell |
R5794 | T10837 | T10836 | arg1Of | assays,viability |
R5795 | T10844 | T10839 | arg1Of | method,the |
R5796 | T10844 | T10840 | arg1Of | method,trypan |
R5797 | T10844 | T10841 | arg1Of | method,blue |
R5798 | T10844 | T10842 | arg1Of | method,dye |
R5799 | T10844 | T10843 | arg1Of | method,exclusion |
R5800 | T10844 | T10845 | arg1Of | method,was |
R5801 | T10844 | T10846 | arg2Of | method,used |
R5802 | T10846 | T10834 | arg1Of | used,For |
R5803 | T10846 | T10838 | arg1Of | used,"," |
R5804 | T10846 | T10845 | arg2Of | used,was |
R5805 | T10848 | T10846 | arg3Of | evaluate,used |
R5806 | T10848 | T10847 | arg1Of | evaluate,to |
R5807 | T10850 | T10848 | arg2Of | potential,evaluate |
R5808 | T10850 | T10849 | arg1Of | potential,the |
R5809 | T10850 | T10851 | arg1Of | potential,of |
R5810 | T10854 | T10851 | arg2Of | effect,of |
R5811 | T10854 | T10852 | arg1Of | effect,direct |
R5812 | T10854 | T10853 | arg1Of | effect,cytotoxic |
R5813 | T10854 | T10855 | arg1Of | effect,of |
R5814 | T10854 | T10857 | arg1Of | effect,on |
R5815 | T10856 | T10855 | arg2Of | inhibitors,of |
R5816 | T10858 | T10857 | arg2Of | cells,on |
R5817 | T10860 | T10859 | arg2Of | incubation,After |
R5818 | T10860 | T10861 | arg1Of | incubation,for |
R5819 | T10863 | T10861 | arg2Of | hours,for |
R5820 | T10863 | T10862 | arg1Of | hours,24 |
R5821 | T10866 | T10865 | arg1Of | cells,the |
R5822 | T10866 | T10867 | arg1Of | cells,were |
R5823 | T10866 | T10868 | arg2Of | cells,harvested |
R5824 | T10868 | T10867 | arg2Of | harvested,were |
R5825 | T10868 | T10869 | arg1Of | harvested,and |
R5826 | T10869 | T10859 | arg1Of | and,After |
R5827 | T10869 | T10864 | arg1Of | and,"," |
R5828 | T10873 | T10870 | arg1Of | viability,the |
R5829 | T10873 | T10871 | arg1Of | viability,percentage |
R5830 | T10873 | T10872 | arg1Of | viability,cell |
R5831 | T10873 | T10874 | arg1Of | viability,was |
R5832 | T10873 | T10875 | arg2Of | viability,calculated |
R5833 | T10875 | T10869 | arg2Of | calculated,and |
R5834 | T10875 | T10874 | arg2Of | calculated,was |
R5835 | T10875 | T10876 | arg1Of | calculated,with |
R5836 | T10875 | T10893 | arg1Of | calculated,[ |
R5837 | T10880 | T10876 | arg2Of | ×,with |
R5838 | T10880 | T10877 | arg1Of | ×,the |
R5839 | T10880 | T10878 | arg1Of | ×,formula |
R5840 | T10880 | T10879 | arg1Of | ×,100 |
R5841 | T10880 | T10881 | arg1Of | ×,( |
R5842 | T10882 | T10881 | arg2Of | number,( |
R5843 | T10882 | T10883 | arg1Of | number,of |
R5844 | T10885 | T10883 | arg2Of | cells/number,of |
R5845 | T10885 | T10884 | arg1Of | cells/number,viable |
R5846 | T10885 | T10886 | arg1Of | cells/number,of |
R5847 | T10888 | T10889 | arg1Of | viable,and |
R5848 | T10889 | T10887 | arg1Of | and,both |
R5849 | T10890 | T10889 | arg2Of | dead,and |
R5850 | T10891 | T10886 | arg2Of | cells,of |
R5851 | T10891 | T10888 | arg1Of | cells,viable |
R5852 | T10891 | T10890 | arg1Of | cells,dead |
R5853 | T10892 | T10881 | arg3Of | ),( |
R5854 | T10894 | T10893 | arg2Of | 21,[ |
R5855 | T10895 | T10893 | arg3Of | ],[ |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10900 | 333-338 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T10899 | 296-301 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T10898 | 225-229 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T10897 | 4-8 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10824 | 150-345 | Sentence | denotes | After incubation for 24 hours, the cells were harvested and the percentage cell viability was calculated with the formula 100 × (number of viable cells/number of both viable and dead cells) [21]. |
T10823 | 0-149 | Sentence | denotes | For cell viability assays, the trypan blue dye exclusion method was used to evaluate the potential of direct cytotoxic effect of inhibitors on cells. |
T109 | 0-149 | Sentence | denotes | For cell viability assays, the trypan blue dye exclusion method was used to evaluate the potential of direct cytotoxic effect of inhibitors on cells. |
T110 | 150-345 | Sentence | denotes | After incubation for 24 hours, the cells were harvested and the percentage cell viability was calculated with the formula 100 × (number of viable cells/number of both viable and dead cells) [21]. |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10984 | 181-205 | Binding | denotes | the cells were harvested |
T10982 | 286-301 | Entity | denotes | of viable cells |
T10981 | 309-338 | Entity | denotes | of both viable and dead cells |
T10980 | 99-148 | Entity | denotes | of direct cytotoxic effect of inhibitors on cells |
T10979 | 31-42 | Entity | denotes | trypan blue |
T10978 | 140-148 | Entity | denotes | on cells |
T10977 | 126-139 | Entity | denotes | of inhibitors |
T10976 | 181-190 | Entity | denotes | the cells |
T10974 | 4-8 | Entity | denotes | cell |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10973 | 344-345 | . | denotes | . |
T10972 | 343-344 | NNP | denotes | ] |
T10971 | 341-343 | CD | denotes | 21 |
T10970 | 340-341 | NNP | denotes | [ |
T10969 | 338-339 | -RRB- | denotes | ) |
T10968 | 333-338 | NNS | denotes | cells |
T10967 | 328-332 | JJ | denotes | dead |
T10966 | 324-327 | CC | denotes | and |
T10965 | 317-323 | JJ | denotes | viable |
T10964 | 312-316 | DT | denotes | both |
T10963 | 309-311 | IN | denotes | of |
T10962 | 296-308 | NN | denotes | cells/number |
T10961 | 289-295 | JJ | denotes | viable |
T10960 | 286-288 | IN | denotes | of |
T10959 | 279-285 | NN | denotes | number |
T10958 | 278-279 | -LRB- | denotes | ( |
T10957 | 276-277 | NN | denotes | × |
T10956 | 272-275 | CD | denotes | 100 |
T10955 | 264-271 | NN | denotes | formula |
T10954 | 260-263 | DT | denotes | the |
T10953 | 255-259 | IN | denotes | with |
T10952 | 244-254 | VBN | denotes | calculated |
T10951 | 240-243 | VBD | denotes | was |
T10950 | 230-239 | NN | denotes | viability |
T10949 | 225-229 | NN | denotes | cell |
T10948 | 214-224 | NN | denotes | percentage |
T10947 | 210-213 | DT | denotes | the |
T10946 | 206-209 | CC | denotes | and |
T10945 | 196-205 | VBN | denotes | harvested |
T10944 | 191-195 | VBD | denotes | were |
T10943 | 185-190 | NNS | denotes | cells |
T10942 | 181-184 | DT | denotes | the |
T10941 | 179-180 | , | denotes | , |
T10940 | 174-179 | NNS | denotes | hours |
T10939 | 171-173 | CD | denotes | 24 |
T10938 | 167-170 | IN | denotes | for |
T10937 | 156-166 | NN | denotes | incubation |
T10936 | 150-155 | IN | denotes | After |
T10935 | 148-149 | . | denotes | . |
T10934 | 143-148 | NNS | denotes | cells |
T10933 | 140-142 | IN | denotes | on |
T10932 | 129-139 | NNS | denotes | inhibitors |
T10931 | 126-128 | IN | denotes | of |
T10930 | 119-125 | NN | denotes | effect |
T10929 | 109-118 | JJ | denotes | cytotoxic |
T10928 | 102-108 | JJ | denotes | direct |
T10927 | 99-101 | IN | denotes | of |
T10926 | 89-98 | NN | denotes | potential |
T10925 | 85-88 | DT | denotes | the |
T10924 | 76-84 | VB | denotes | evaluate |
T10923 | 73-75 | TO | denotes | to |
T10922 | 68-72 | VBN | denotes | used |
T10921 | 64-67 | VBD | denotes | was |
T10920 | 57-63 | NN | denotes | method |
T10919 | 47-56 | NN | denotes | exclusion |
T10918 | 43-46 | NN | denotes | dye |
T10917 | 38-42 | JJ | denotes | blue |
T10916 | 31-37 | NN | denotes | trypan |
T10915 | 27-30 | DT | denotes | the |
T10914 | 25-26 | , | denotes | , |
T10913 | 19-25 | NNS | denotes | assays |
T10912 | 9-18 | NN | denotes | viability |
T10911 | 4-8 | NN | denotes | cell |
T10910 | 0-3 | IN | denotes | For |
R5865 | T10910 | T10922 | prep | For,used |
R5866 | T10911 | T10912 | compound | cell,viability |
R5867 | T10912 | T10913 | compound | viability,assays |
R5868 | T10913 | T10910 | pobj | assays,For |
R5869 | T10914 | T10922 | punct | ",",used |
R5870 | T10915 | T10920 | det | the,method |
R5871 | T10916 | T10920 | amod | trypan,method |
R5872 | T10917 | T10918 | amod | blue,dye |
R5873 | T10918 | T10919 | compound | dye,exclusion |
R5874 | T10919 | T10920 | compound | exclusion,method |
R5875 | T10920 | T10922 | nsubjpass | method,used |
R5876 | T10921 | T10922 | auxpass | was,used |
R5877 | T10922 | T10922 | ROOT | used,used |
R5878 | T10923 | T10924 | aux | to,evaluate |
R5879 | T10924 | T10922 | xcomp | evaluate,used |
R5880 | T10925 | T10926 | det | the,potential |
R5881 | T10926 | T10924 | dobj | potential,evaluate |
R5882 | T10927 | T10926 | prep | of,potential |
R5883 | T10928 | T10930 | amod | direct,effect |
R5884 | T10929 | T10930 | amod | cytotoxic,effect |
R5885 | T10930 | T10927 | pobj | effect,of |
R5886 | T10931 | T10930 | prep | of,effect |
R5887 | T10932 | T10931 | pobj | inhibitors,of |
R5888 | T10933 | T10932 | prep | on,inhibitors |
R5889 | T10934 | T10933 | pobj | cells,on |
R5890 | T10935 | T10922 | punct | .,used |
R5891 | T10936 | T10945 | prep | After,harvested |
R5892 | T10937 | T10936 | pobj | incubation,After |
R5893 | T10938 | T10937 | prep | for,incubation |
R5894 | T10939 | T10940 | nummod | 24,hours |
R5895 | T10940 | T10938 | pobj | hours,for |
R5896 | T10941 | T10945 | punct | ",",harvested |
R5897 | T10942 | T10943 | det | the,cells |
R5898 | T10943 | T10945 | nsubjpass | cells,harvested |
R5899 | T10944 | T10945 | auxpass | were,harvested |
R5900 | T10945 | T10945 | ROOT | harvested,harvested |
R5901 | T10946 | T10945 | cc | and,harvested |
R5902 | T10947 | T10950 | det | the,viability |
R5903 | T10948 | T10949 | compound | percentage,cell |
R5904 | T10949 | T10950 | compound | cell,viability |
R5905 | T10950 | T10952 | nsubjpass | viability,calculated |
R5906 | T10951 | T10952 | auxpass | was,calculated |
R5907 | T10952 | T10945 | conj | calculated,harvested |
R5908 | T10953 | T10952 | prep | with,calculated |
R5909 | T10954 | T10955 | det | the,formula |
R5910 | T10955 | T10953 | pobj | formula,with |
R5911 | T10956 | T10957 | nummod | 100,× |
R5912 | T10957 | T10972 | npadvmod | ×,] |
R5913 | T10958 | T10959 | punct | (,number |
R5914 | T10959 | T10972 | nmod | number,] |
R5915 | T10960 | T10959 | prep | of,number |
R5916 | T10961 | T10962 | amod | viable,cells/number |
R5917 | T10962 | T10960 | pobj | cells/number,of |
R5918 | T10963 | T10962 | prep | of,cells/number |
R5919 | T10964 | T10965 | preconj | both,viable |
R5920 | T10965 | T10968 | amod | viable,cells |
R5921 | T10966 | T10965 | cc | and,viable |
R5922 | T10967 | T10965 | conj | dead,viable |
R5923 | T10968 | T10963 | pobj | cells,of |
R5924 | T10969 | T10959 | punct | ),number |
R5925 | T10970 | T10972 | quantmod | [,] |
R5926 | T10971 | T10972 | nummod | 21,] |
R5927 | T10972 | T10952 | conj | ],calculated |
R5928 | T10973 | T10952 | punct | .,calculated |