PMC:1064895 / 11118-11272 JSONTXT

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    biosemtest

    {"project":"biosemtest","denotations":[{"id":"T8544","span":{"begin":11,"end":16},"obj":"UMLS/C0564385"},{"id":"T8535","span":{"begin":73,"end":85},"obj":"UMLS/C2598148"},{"id":"T8528","span":{"begin":20,"end":30},"obj":"UMLS/C1979572"},{"id":"T8525","span":{"begin":41,"end":50},"obj":"UMLS/C1555707"},{"id":"T8513","span":{"begin":73,"end":85},"obj":"UMLS/C1548427"},{"id":"T8466","span":{"begin":73,"end":85},"obj":"UMLS/C0022877"},{"id":"T8370","span":{"begin":128,"end":142},"obj":"UMLS/C0947322"},{"id":"T8285","span":{"begin":2,"end":7},"obj":"UMLS/C0687676"},{"id":"T8267","span":{"begin":73,"end":85},"obj":"UMLS/C1619828"},{"id":"T8613","span":{"begin":73,"end":85},"obj":"UMLS/C1697786"},{"id":"T8608","span":{"begin":128,"end":142},"obj":"UMLS/C1546933"},{"id":"T8602","span":{"begin":11,"end":16},"obj":"UMLS/C0439227"},{"id":"T8601","span":{"begin":2,"end":7},"obj":"UMLS/C0231290"},{"id":"T8586","span":{"begin":128,"end":142},"obj":"UMLS/C1705426"},{"id":"T8248","span":{"begin":100,"end":103},"obj":"UMLS/C0041703"},{"id":"T8228","span":{"begin":32,"end":36},"obj":"UMLS/C0035696"},{"id":"T8363","span":{"begin":41,"end":50},"obj":"UMLS/C1705851"},{"id":"T8358","span":{"begin":128,"end":142},"obj":"UMLS/C1548599"},{"id":"T8357","span":{"begin":20,"end":30},"obj":"UMLS/C1980044"},{"id":"T8319","span":{"begin":73,"end":85},"obj":"UMLS/C1571737"},{"id":"T8303","span":{"begin":41,"end":50},"obj":"UMLS/C0185115"}],"text":"After 16 hours of incubation, mRNA was extracted with RNAzol B (Biotex Laboratories, Houston, TX, USA) in accordance with the manufacturer's instructions."}

    sentences

    {"project":"sentences","denotations":[{"id":"T8625","span":{"begin":0,"end":154},"obj":"Sentence"},{"id":"T84","span":{"begin":0,"end":154},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"After 16 hours of incubation, mRNA was extracted with RNAzol B (Biotex Laboratories, Houston, TX, USA) in accordance with the manufacturer's instructions."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T9164","span":{"begin":30,"end":48},"obj":"Negative_regulation"},{"id":"T9152","span":{"begin":85,"end":102},"obj":"Protein"},{"id":"T9145","span":{"begin":30,"end":34},"obj":"Protein"}],"relations":[{"id":"R4821","pred":"themeOf","subj":"T9145","obj":"T9164"}],"text":"After 16 hours of incubation, mRNA was extracted with RNAzol B (Biotex Laboratories, Houston, TX, USA) in accordance with the manufacturer's instructions."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T8827","span":{"begin":153,"end":154},"obj":"."},{"id":"T8826","span":{"begin":141,"end":153},"obj":"NNS"},{"id":"T8825","span":{"begin":138,"end":140},"obj":"POS"},{"id":"T8824","span":{"begin":126,"end":138},"obj":"NN"},{"id":"T8823","span":{"begin":122,"end":125},"obj":"DT"},{"id":"T8822","span":{"begin":117,"end":121},"obj":"IN"},{"id":"T8821","span":{"begin":106,"end":116},"obj":"NN"},{"id":"T8820","span":{"begin":103,"end":105},"obj":"IN"},{"id":"T8819","span":{"begin":101,"end":102},"obj":"-RRB-"},{"id":"T8818","span":{"begin":98,"end":101},"obj":"NNP"},{"id":"T8817","span":{"begin":96,"end":97},"obj":","},{"id":"T8816","span":{"begin":94,"end":96},"obj":"NNP"},{"id":"T8815","span":{"begin":92,"end":93},"obj":","},{"id":"T8814","span":{"begin":85,"end":92},"obj":"NNP"},{"id":"T8813","span":{"begin":83,"end":84},"obj":","},{"id":"T8812","span":{"begin":71,"end":83},"obj":"NNPS"},{"id":"T8811","span":{"begin":64,"end":70},"obj":"NNP"},{"id":"T8810","span":{"begin":63,"end":64},"obj":"-LRB-"},{"id":"T8809","span":{"begin":61,"end":62},"obj":"NNP"},{"id":"T8808","span":{"begin":54,"end":60},"obj":"NNP"},{"id":"T8807","span":{"begin":49,"end":53},"obj":"IN"},{"id":"T8806","span":{"begin":39,"end":48},"obj":"VBN"},{"id":"T8805","span":{"begin":35,"end":38},"obj":"VBD"},{"id":"T8804","span":{"begin":30,"end":34},"obj":"NNP"},{"id":"T8803","span":{"begin":28,"end":29},"obj":","},{"id":"T8802","span":{"begin":18,"end":28},"obj":"NN"},{"id":"T8801","span":{"begin":15,"end":17},"obj":"IN"},{"id":"T8800","span":{"begin":9,"end":14},"obj":"NNS"},{"id":"T8799","span":{"begin":6,"end":8},"obj":"CD"},{"id":"T8798","span":{"begin":0,"end":5},"obj":"IN"}],"relations":[{"id":"R4519","pred":"prep","subj":"T8798","obj":"T8806"},{"id":"R4520","pred":"nummod","subj":"T8799","obj":"T8800"},{"id":"R4521","pred":"pobj","subj":"T8800","obj":"T8798"},{"id":"R4522","pred":"prep","subj":"T8801","obj":"T8800"},{"id":"R4523","pred":"pobj","subj":"T8802","obj":"T8801"},{"id":"R4524","pred":"punct","subj":"T8803","obj":"T8806"},{"id":"R4525","pred":"nsubjpass","subj":"T8804","obj":"T8806"},{"id":"R4526","pred":"auxpass","subj":"T8805","obj":"T8806"},{"id":"R4527","pred":"ROOT","subj":"T8806","obj":"T8806"},{"id":"R4528","pred":"prep","subj":"T8807","obj":"T8806"},{"id":"R4529","pred":"compound","subj":"T8808","obj":"T8809"},{"id":"R4530","pred":"pobj","subj":"T8809","obj":"T8807"},{"id":"R4531","pred":"punct","subj":"T8810","obj":"T8812"},{"id":"R4532","pred":"compound","subj":"T8811","obj":"T8812"},{"id":"R4533","pred":"appos","subj":"T8812","obj":"T8809"},{"id":"R4534","pred":"punct","subj":"T8813","obj":"T8812"},{"id":"R4535","pred":"conj","subj":"T8814","obj":"T8812"},{"id":"R4536","pred":"punct","subj":"T8815","obj":"T8814"},{"id":"R4537","pred":"conj","subj":"T8816","obj":"T8814"},{"id":"R4538","pred":"punct","subj":"T8817","obj":"T8816"},{"id":"R4539","pred":"conj","subj":"T8818","obj":"T8816"},{"id":"R4540","pred":"punct","subj":"T8819","obj":"T8812"},{"id":"R4541","pred":"prep","subj":"T8820","obj":"T8806"},{"id":"R4542","pred":"pobj","subj":"T8821","obj":"T8820"},{"id":"R4543","pred":"prep","subj":"T8822","obj":"T8821"},{"id":"R4544","pred":"det","subj":"T8823","obj":"T8824"},{"id":"R4545","pred":"poss","subj":"T8824","obj":"T8826"},{"id":"R4546","pred":"case","subj":"T8825","obj":"T8824"},{"id":"R4547","pred":"pobj","subj":"T8826","obj":"T8822"},{"id":"R4548","pred":"punct","subj":"T8827","obj":"T8806"}],"text":"After 16 hours of incubation, mRNA was extracted with RNAzol B (Biotex Laboratories, Houston, TX, USA) in accordance with the manufacturer's instructions."}