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PMC:1064895 / 10902-12494 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T8218 1578-1583 Protein denotes GAPDH
T8217 1555-1560 Protein denotes IL-17
T8216 1511-1526 Transcription denotes mRNA expression
T8215 1395-1400 Protein denotes IL-17
T8214 1385-1390 Protein denotes GAPDH
T8213 1284-1289 Protein denotes IL-17
T8212 1274-1279 Protein denotes GAPDH
T8211 1055-1060 Protein denotes GAPDH
T8210 1008-1013 Protein denotes GAPDH
T8209 966-1006 Protein denotes glyceraldehyde-3-phosphate dehydrogenase
T8208 858-863 Protein denotes IL-17
T8207 595-598 Protein denotes Taq
T8206 18-23 Protein denotes IL-17
T8205 1578-1583 Protein denotes GAPDH
T8204 1555-1560 Protein denotes IL-17
T8203 1395-1400 Protein denotes IL-17
T8202 1385-1390 Protein denotes GAPDH
T8201 1284-1289 Protein denotes IL-17
T8200 1274-1279 Protein denotes GAPDH
T8199 1055-1060 Protein denotes GAPDH
T8198 1008-1013 Protein denotes GAPDH
T8197 966-1006 Protein denotes glyceraldehyde-3-phosphate dehydrogenase
T8196 858-863 Protein denotes IL-17
T8195 595-598 Protein denotes Taq
T8194 18-23 Protein denotes IL-17
R4473 T8210 T8209 equivalentTo GAPDH,glyceraldehyde-3-phosphate dehydrogenase
R4474 T8217 T8216 themeOf IL-17,mRNA expression
R4475 T8218 T8216 themeOf GAPDH,mRNA expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8738 1578-1583 Protein denotes GAPDH
T8737 1555-1560 Protein denotes IL-17
T8736 1385-1390 Protein denotes GAPDH
T8735 1395-1400 Protein denotes IL-17
T8734 1284-1289 Protein denotes IL-17
T8733 1274-1279 Protein denotes GAPDH
T8732 1055-1060 Protein denotes GAPDH
T8731 1008-1013 Protein denotes GAPDH
T8730 966-1006 Protein denotes glyceraldehyde-3-phosphate dehydrogenase
T8729 858-863 Protein denotes IL-17
T8728 595-598 Protein denotes Taq
T8727 18-23 Protein denotes IL-17

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T9178 1578-1583 Protein denotes GAPDH
T9177 1555-1560 Protein denotes IL-17
T9176 1385-1390 Protein denotes GAPDH
T9175 1395-1400 Protein denotes IL-17
T9174 1284-1289 Protein denotes IL-17
T9173 1274-1279 Protein denotes GAPDH
T9172 1055-1060 Protein denotes GAPDH
T9171 1008-1013 Protein denotes GAPDH
T9170 966-1006 Protein denotes glyceraldehyde-3-phosphate dehydrogenase
T9169 858-863 Protein denotes IL-17
T9168 595-598 Protein denotes Taq
T9167 18-23 Protein denotes IL-17

biosemtest

Id Subject Object Predicate Lexical cue
T8582 1114-1123 UMLS/C0443286 denotes s were pr
T8581 678-686 UMLS/C0443286 denotes n was pe
T8580 974-1014 UP/P39460 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8579 466-487 UMLS/C0035380 denotes e transcription syste
T8578 373-394 UMLS/C0035380 denotes verse transcription o
T8577 132-146 UMLS/C0086045 denotes ncentrations o
T8576 974-1014 UP/Q5JHB5 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8575 946-949 UMLS/C1413076 denotes GTG
T8574 770-775 UMLS/C0439175 denotes olume
T8573 407-412 UMLS/C0439175 denotes al mR
T8572 1557-1562 UMLS/C1547037 denotes -17 P
T8571 99-103 UMLS/C1321301 denotes MC w
T8570 511-516 UMLS/C0022341 denotes . PCR
T8569 974-1014 UP/A1RV79 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8568 974-1014 UP/C3NEV8 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8567 828-835 UMLS/C1279901 denotes for eac
T8566 665-672 UMLS/C1279901 denotes . The r
T8565 974-1014 UP/Q92243 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8564 974-1014 UP/P46713 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8563 974-1014 UP/Q9Y8E9 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8562 886-889 UMLS/C1424942 denotes GGG
T8561 974-1014 UP/O32755 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8560 974-1014 UP/Q01651 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8559 974-1014 UP/A4WIW2 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8558 974-1014 UP/A3FKF7 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8557 488-494 UMLS/C1553451 denotes (Taka
T8556 974-1014 UP/C4KHW5 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8555 974-1014 UP/P47543 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8554 974-1014 UP/Q9UR38 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8553 974-1014 UP/Q9Y796 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8552 886-889 UP/Q64559 denotes GGG
T8551 974-1014 UP/C3NGT6 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8550 109-118 UMLS/C1439852 denotes cubated w
T8549 974-1014 UP/O59494 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8548 488-494 UMLS/C0449913 denotes (Taka
T8547 601-619 UMLS/C0075813 denotes A polymerase (Taka
T8546 1476-1489 UMLS/C1521871 denotes on for each m
T8545 523-536 UMLS/C1521871 denotes ication of cD
T8544 227-232 UMLS/C0564385 denotes urs o
T8543 974-1014 UP/P51469 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8542 974-1014 UP/O59841 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8541 974-1014 UP/P54226 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8540 974-1014 UP/Q92211 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8539 974-1014 UP/Q9YFS9 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8538 974-1014 UP/P10618 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8537 974-1014 UP/P20445 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8536 974-1014 UP/P20287 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8535 289-301 UMLS/C2598148 denotes boratories,
T8534 886-889 UMLS/C1865144 denotes GGG
T8533 488-494 UMLS/C1704459 denotes (Taka
T8532 974-1014 UP/P44304 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8531 974-1014 UP/C6A312 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8530 974-1014 UP/A6VIW4 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8529 1576-1583 UMLS/C1704444 denotes r GAPDH
T8528 236-246 UMLS/C1979572 denotes cubation,
T8527 974-1014 UP/Q9HGY7 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8526 974-1014 UP/P0CE13 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8525 257-266 UMLS/C1555707 denotes tracted w
T8524 601-619 UMLS/C2257065 denotes A polymerase (Taka
T8523 757-759 UMLS/C0020283 denotes i
T8522 1467-1472 UMLS/C0585064 denotes plifi
T8521 1499-1507 UMLS/C0567416 denotes he level
T8520 845-854 UMLS/C0567416 denotes s were us
T8519 132-146 UMLS/C1446561 denotes ncentrations o
T8518 1129-1138 UMLS/C1709694 denotes d in a DN
T8517 974-1014 UP/P26988 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8516 974-1014 UP/A9A6M9 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8515 974-1014 UP/Q01597 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8514 974-1014 UP/P51009 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8513 289-301 UMLS/C1548427 denotes boratories,
T8512 974-1014 UP/Q9Z518 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8511 974-1014 UP/Q4KYY3 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8510 974-1014 UP/Q07234 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8509 974-1014 UP/P08439 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8508 1576-1583 UMLS/C1550506 denotes r GAPDH
T8507 974-1014 UP/A3CYG8 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8506 974-1014 UP/Q92263 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8505 1045-1048 UMLS/C1333664 denotes GTA
T8504 974-1014 UP/Q00584 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8503 974-1014 UP/B0R2M2 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8502 886-889 UMLS/C1412050 denotes GGG
T8501 974-1014 UP/P15115 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8500 974-1014 UP/Q8NK47 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8499 974-1014 UP/B1YD06 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8498 974-1014 UP/P19314 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8497 886-889 UMLS/C1825831 denotes GGG
T8496 974-1014 UP/Q8TFJ2 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8495 1557-1562 UMLS/C1610540 denotes -17 P
T8494 189-199 UMLS/C1999216 denotes hibitors (
T8493 974-1014 UP/P0A1P1 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8492 974-1014 UP/P0C0G6 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8491 1037-1040 UMLS/C1420714 denotes GCG
T8490 1315-1318 UMLS/C0702093 denotes nga
T8489 1254-1257 UMLS/C0702093 denotes nea
T8488 359-371 UMLS/C0220931 denotes structions.
T8487 757-759 UMLS/C0031526 denotes i
T8486 974-1014 UP/P0A1P0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8485 974-1014 UP/P46796 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8484 902-905 UMLS/C0282160 denotes TTG
T8483 974-1014 UP/P04406 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8482 974-1014 UP/P35143 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8481 974-1014 UP/P34783 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8480 974-1014 UP/P24748 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8479 1522-1537 UMLS/C1515670 denotes sion was presen
T8478 974-1014 UP/A6URW1 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8477 974-1014 UP/P27726 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8476 974-1014 UP/P24751 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8475 1566-1571 UMLS/C0384648 denotes roduc
T8474 1406-1411 UMLS/C0384648 denotes was
T8473 1294-1299 UMLS/C0384648 denotes lowed
T8472 918-923 UMLS/C0384648 denotes tisen
T8471 866-871 UMLS/C0384648 denotes nse,
T8470 18-23 UMLS/C0384648 denotes IL-17
T8469 974-1014 UP/P48812 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8468 974-1014 UP/P32638 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8467 974-1014 UP/B6YUU0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8466 289-301 UMLS/C0022877 denotes boratories,
T8465 962-965 UMLS/C2257889 denotes 3';
T8464 974-1014 UP/P52694 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8463 974-1014 UP/A5ULT9 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8462 691-700 UMLS/C1550369 denotes ed in PCR
T8461 558-567 UMLS/C1550369 denotes med by ad
T8460 422-431 UMLS/C1550369 denotes formed at
T8459 1422-1432 UMLS/C0521095 denotes as falling
T8458 974-1014 UP/Q3IUT3 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8457 974-1014 UP/Q48335 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8456 974-1014 UP/A6UUN9 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8455 974-1014 UP/P0C0G7 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8454 974-1014 UP/Q6BMK0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8453 974-1014 UP/P00355 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8452 1584-1588 UMLS/C0205136 denotes prod
T8451 178-185 UMLS/C0332197 denotes sence o
T8450 974-1014 UP/Q59309 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8449 974-1014 UP/P00361 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8448 974-1014 UP/P23722 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8447 974-1014 UP/Q27652 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8446 974-1014 UP/Q89AK1 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8445 974-1014 UP/Q12XM4 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8444 974-1014 UP/O42259 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8443 974-1014 UP/Q6CCU7 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8442 1103-1106 UMLS/C2699751 denotes '.
T8441 1049-1052 UMLS/C2699751 denotes C-3
T8440 974-1014 UP/Q8PTD3 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8439 178-185 UMLS/C0424530 denotes sence o
T8438 974-1014 UP/Q5V061 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8437 898-901 UMLS/C0796552 denotes TCA
T8436 974-1014 UP/Q59800 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8435 974-1014 UP/Q9UVC0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8434 1566-1571 UMLS/C1623218 denotes roduc
T8433 1406-1411 UMLS/C1623218 denotes was
T8432 1294-1299 UMLS/C1623218 denotes lowed
T8431 918-923 UMLS/C1623218 denotes tisen
T8430 866-871 UMLS/C1623218 denotes nse,
T8429 18-23 UMLS/C1623218 denotes IL-17
T8428 1023-1028 UMLS/C0036658 denotes '-CGA
T8427 872-877 UMLS/C0036658 denotes '-ATG
T8426 808-813 UMLS/C0036658 denotes d ant
T8425 645-650 UMLS/C0036658 denotes nd an
T8424 974-1014 UP/O28542 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8423 974-1014 UP/Q9PJN6 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8422 974-1014 UP/P24750 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8421 1129-1138 UMLS/C1522240 denotes d in a DN
T8420 974-1014 UP/Q6L125 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8419 974-1014 UP/Q6M0E6 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8418 974-1014 UP/Q9HSS7 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8417 974-1014 UP/O52631 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8416 1455-1466 UMLS/C1552645 denotes phase of a
T8415 974-1014 UP/Q59199 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8414 1436-1443 UMLS/C1272705 denotes hin the
T8413 545-553 UMLS/C1510844 denotes ts was p
T8412 974-1014 UP/P09316 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8411 974-1014 UP/Q59906 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8410 974-1014 UP/B0B879 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8409 828-835 UMLS/C0206415 denotes for eac
T8408 665-672 UMLS/C0206415 denotes . The r
T8407 974-1014 UP/Q9P8C0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8406 974-1014 UP/Q4U3L0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8405 974-1014 UP/P58839 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8404 974-1014 UP/Q5R2J2 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8403 974-1014 UP/Q12552 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8402 974-1014 UP/Q28554 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8401 1129-1138 UMLS/C1551390 denotes d in a DN
T8400 974-1014 UP/P52987 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8399 1566-1571 UMLS/C1825592 denotes roduc
T8398 1406-1411 UMLS/C1825592 denotes was
T8397 1294-1299 UMLS/C1825592 denotes lowed
T8396 918-923 UMLS/C1825592 denotes tisen
T8395 866-871 UMLS/C1825592 denotes nse,
T8394 18-23 UMLS/C1825592 denotes IL-17
T8393 974-1014 UP/P64179 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8392 974-1014 UP/P61879 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8391 886-889 UMLS/C1550741 denotes GGG
T8390 974-1014 UP/P17244 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8389 770-775 UMLS/C0439810 denotes olume
T8388 540-544 UMLS/C0006556 denotes liqu
T8387 886-889 UMLS/C0279208 denotes GGG
T8386 1375-1381 UMLS/C1511572 denotes for b
T8385 1210-1216 UMLS/C1511572 denotes or 30
T8384 407-412 UMLS/C0439810 denotes al mR
T8383 1148-1162 UMLS/C1611676 denotes cycler (Perkin
T8382 902-905 UMLS/C0175754 denotes TTG
T8381 946-949 UMLS/C0279290 denotes GTG
T8380 1301-1309 UMLS/C0332283 denotes y 1 min
T8379 798-807 UMLS/C0332283 denotes g sense a
T8378 1091-1094 UMLS/C1419183 denotes GGA
T8377 1301-1309 UMLS/C0332282 denotes y 1 min
T8376 798-807 UMLS/C0332282 denotes g sense a
T8375 776-782 UMLS/C0449468 denotes of 25
T8374 974-1014 UP/C3MWN0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8373 1359-1367 UMLS/C1705914 denotes r 25 cyc
T8372 1542-1551 UMLS/C0449450 denotes s a ratio
T8371 974-1014 UP/P00362 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8370 344-358 UMLS/C0947322 denotes nufacturer's i
T8369 974-1014 UP/Q8K8M9 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8368 974-1014 UP/Q9ZKT0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8367 974-1014 UP/P29497 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8300 906-909 UMLS/C0041405 denotes 3';
T8299 974-1014 UP/Q9Z7T0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8298 974-1014 UP/Q757I2 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8297 974-1014 UP/A4FZL2 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8296 974-1014 UP/Q9N2D5 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8295 1129-1138 UMLS/C1550044 denotes d in a DN
T8294 974-1014 UP/A2BLC6 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8293 571-577 UMLS/C1524062 denotes 2.5 m
T8292 974-1014 UP/P53430 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8291 974-1014 UP/Q9V1P1 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8290 359-371 UMLS/C1292796 denotes structions.
T8289 974-1014 UP/Q4J940 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8288 974-1014 UP/P10096 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8287 974-1014 UP/O57479 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8286 757-759 UMLS/C2363150 denotes i
T8285 218-223 UMLS/C0687676 denotes ter 1
T8284 757-759 UMLS/C0450409 denotes i
T8283 757-759 UMLS/C0450408 denotes i
T8282 757-759 UMLS/C0450407 denotes i
T8281 691-700 UMLS/C0884358 denotes ed in PCR
T8280 558-567 UMLS/C0884358 denotes med by ad
T8279 422-431 UMLS/C0884358 denotes formed at
T8278 776-782 UMLS/C1705102 denotes of 25
T8277 201-209 UMLS/C0251991 denotes 294002,
T8276 1566-1571 UMLS/C1522571 denotes roduc
T8275 1406-1411 UMLS/C1522571 denotes was
T8274 1294-1299 UMLS/C1522571 denotes lowed
T8273 918-923 UMLS/C1522571 denotes tisen
T8272 866-871 UMLS/C1522571 denotes nse,
T8271 18-23 UMLS/C1522571 denotes IL-17
T8270 166-174 UMLS/C0392148 denotes esence o
T8269 1436-1443 UMLS/C0085639 denotes hin the
T8268 211-215 UMLS/C0084183 denotes TC).
T8267 289-301 UMLS/C1619828 denotes boratories,
T8266 974-1014 UP/Q05025 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8265 1572-1575 UMLS/C0032520 denotes ov
T8264 1343-1346 UMLS/C0032520 denotes wer
T8263 704-707 UMLS/C0032520 denotes fer
T8262 519-522 UMLS/C0032520 denotes pli
T8261 73-98 UMLS/C0032520 denotes lymerase chain reaction P
T8260 189-199 UMLS/C0243077 denotes hibitors (
T8259 974-1014 UP/C3MQN0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8258 974-1014 UP/A3MTU1 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8257 886-889 UMLS/C0427611 denotes GGG
T8256 974-1014 UP/P94915 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8255 974-1014 UP/P55070 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8254 974-1014 UP/Q2NEN0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8253 974-1014 UP/O83816 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8252 974-1014 UP/P55971 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8622 974-1014 UP/P24753 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8621 1091-1094 UMLS/C0205851 denotes GGA
T8620 886-889 UP/P15318 denotes GGG
T8619 1413-1417 UMLS/C0323983 denotes term
T8618 1229-1241 UMLS/C0301642 denotes tion at 94°C
T8617 974-1014 UP/P87197 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8616 898-901 UMLS/C1417239 denotes TCA
T8615 1114-1123 UMLS/C1114821 denotes s were pr
T8614 678-686 UMLS/C1114821 denotes n was pe
T8613 289-301 UMLS/C1697786 denotes boratories,
T8612 890-893 UMLS/C1413193 denotes AAG
T8611 359-371 UMLS/C1442085 denotes structions.
T8610 974-1014 UP/O67161 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8609 1129-1138 UMLS/C1184743 denotes d in a DN
T8608 344-358 UMLS/C1546933 denotes nufacturer's i
T8607 974-1014 UP/P00356 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8606 974-1014 UP/P24749 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8605 723-728 UMLS/C0024472 denotes 50 mM
T8604 974-1014 UP/Q58546 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8603 974-1014 UP/Q01982 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8602 227-232 UMLS/C0439227 denotes urs o
T8601 218-223 UMLS/C0231290 denotes ter 1
T8600 950-953 UMLS/C0003354 denotes GAC
T8599 974-1014 UP/Q94469 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8598 974-1014 UP/P57384 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8597 974-1014 UP/A7IB57 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8596 1557-1562 UMLS/C0456603 denotes -17 P
T8595 974-1014 UP/P17721 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8594 974-1014 UP/P04797 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8593 1315-1318 UMLS/C0439232 denotes nga
T8592 1254-1257 UMLS/C0439232 denotes nea
T8591 974-1014 UP/P19089 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8590 962-965 UMLS/C1418544 denotes 3';
T8589 974-1014 UP/P75358 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8588 1144-1147 UMLS/C0012854 denotes mal
T8587 974-1014 UP/Q9N655 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8586 344-358 UMLS/C1705426 denotes nufacturer's i
T8585 1053-1056 UMLS/C2697657 denotes ; G
T8584 886-889 UP/Q57506 denotes GGG
T8583 950-953 UMLS/C0003442 denotes GAC
T8251 974-1014 UP/Q1DTF9 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8250 974-1014 UP/Q00301 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8249 1197-1200 UMLS/C0041703 denotes oug
T8248 316-319 UMLS/C0041703 denotes A)
T8247 974-1014 UP/P24164 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8246 974-1014 UP/P54117 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8245 571-577 UMLS/C1720086 denotes 2.5 m
T8244 974-1014 UP/C3N6F0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8243 974-1014 UP/Q8ZWK7 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8242 974-1014 UP/Q5XDW3 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8241 974-1014 UP/P16858 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8240 974-1014 UP/P32637 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8239 776-782 UMLS/C2700258 denotes of 25
T8238 974-1014 UP/P70685 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8237 974-1014 UP/P55071 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8236 1396-1401 UMLS/C1414968 denotes L-17;
T8235 1284-1289 UMLS/C1414968 denotes IL-17
T8234 1063-1068 UMLS/C1414968 denotes tisen
T8233 1016-1021 UMLS/C1414968 denotes ense,
T8232 974-1014 UMLS/C1414968 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8231 974-1014 UP/P24166 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8230 974-1014 UP/Q8X1X3 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8229 413-417 UMLS/C0035696 denotes A wa
T8228 248-252 UMLS/C0035696 denotes NA w
T8227 24-28 UMLS/C0035696 denotes mRNA
T8226 974-1014 UP/Q2FNA2 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8225 974-1014 UP/Q00640 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8224 974-1014 UP/P28844 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8223 974-1014 UP/O57672 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8222 974-1014 UP/P64178 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8221 1576-1583 UMLS/C1514468 denotes r GAPDH
T8220 974-1014 UP/P61880 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8219 974-1014 UP/Q971K2 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8366 708-714 UMLS/C0006353 denotes (1.5 m
T8365 974-1014 UP/Q9UW96 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8364 974-1014 UP/A4YHA5 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8363 257-266 UMLS/C1705851 denotes tracted w
T8362 946-949 UMLS/C0280453 denotes GTG
T8361 1091-1094 UMLS/C0220620 denotes GGA
T8360 1087-1090 UMLS/C1415587 denotes CAG
T8359 906-909 UMLS/C1415587 denotes 3';
T8358 344-358 UMLS/C1548599 denotes nufacturer's i
T8357 236-246 UMLS/C1980044 denotes cubation,
T8356 1476-1489 UMLS/C1517480 denotes on for each m
T8355 523-536 UMLS/C1517480 denotes ication of cD
T8354 178-185 UMLS/C1689985 denotes sence o
T8353 1045-1048 UMLS/C0017687 denotes GTA
T8352 974-1014 UP/Q5XJ10 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8351 828-835 UMLS/C0205435 denotes for eac
T8350 665-672 UMLS/C0205435 denotes . The r
T8349 1301-1309 UMLS/C1719822 denotes y 1 min
T8348 798-807 UMLS/C1719822 denotes g sense a
T8347 1045-1048 UMLS/C1705879 denotes GTA
T8346 776-782 UMLS/C1690016 denotes of 25
T8345 974-1014 UP/P46406 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8344 974-1014 UP/Q9HJ69 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8343 974-1014 UP/P51640 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8342 974-1014 UP/P83601 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8341 962-965 UMLS/C0052586 denotes 3';
T8340 1144-1147 UMLS/C1325786 denotes mal
T8339 359-371 UMLS/C0302828 denotes structions.
T8338 1542-1551 UMLS/C0150312 denotes s a ratio
T8337 166-174 UMLS/C0150312 denotes esence o
T8336 974-1014 UMLS/C0017857 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8335 1476-1489 UMLS/C1705759 denotes on for each m
T8334 523-536 UMLS/C1705759 denotes ication of cD
T8333 1347-1353 UMLS/C0332490 denotes repea
T8332 1467-1472 UMLS/C0205390 denotes plifi
T8331 571-577 UMLS/C1883712 denotes 2.5 m
T8330 974-1014 UP/Q9HFX1 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8329 1359-1367 UMLS/C0205341 denotes r 25 cyc
T8328 974-1014 UP/Q28259 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8327 1513-1518 UMLS/C0456079 denotes NA ex
T8326 974-1014 UP/P24163 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8325 974-1014 UP/P19315 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8324 974-1014 UP/P56649 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8323 974-1014 UP/Q96US8 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8322 974-1014 UP/Q97BJ8 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8321 890-893 UMLS/C1426689 denotes AAG
T8320 359-371 UMLS/C0039401 denotes structions.
T8319 289-301 UMLS/C1571737 denotes boratories,
T8318 1513-1518 UMLS/C0441889 denotes NA ex
T8317 757-759 UMLS/C1304686 denotes i
T8316 974-1014 UP/P68777 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8315 1359-1367 UMLS/C1547730 denotes r 25 cyc
T8314 974-1014 UP/Q5RAB4 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8313 974-1014 UP/O27090 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8312 1315-1318 UMLS/C1552937 denotes nga
T8311 1254-1257 UMLS/C1552937 denotes nea
T8310 974-1014 UP/P00357 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8309 974-1014 UP/Q8J1H3 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8308 974-1014 UP/P46795 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8307 1436-1443 UMLS/C0231174 denotes hin the
T8306 974-1014 UP/Q8WZN0 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8305 974-1014 UP/O13507 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8304 974-1014 UP/P09317 denotes dehyde-3-phosphate dehydrogenase (GAPDH)
T8303 257-266 UMLS/C0185115 denotes tracted w
T8302 49-56 UMLS/C1555029 denotes reverse
T8301 1087-1090 UMLS/C0041405 denotes CAG

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T8664 1578-1583 Protein denotes GAPDH
T8663 1555-1560 Protein denotes IL-17
T8662 1395-1400 Protein denotes IL-17
T8661 1385-1390 Protein denotes GAPDH
T8660 1284-1289 Protein denotes IL-17
T8659 1274-1279 Protein denotes GAPDH
T8658 1055-1060 Protein denotes GAPDH
T8657 1008-1013 Protein denotes GAPDH
T8656 966-1006 Protein denotes glyceraldehyde-3-phosphate dehydrogenase
T8655 858-863 Protein denotes IL-17
T8654 595-598 Protein denotes Taq
T8653 18-23 Protein denotes IL-17

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8726 1029-1032 http://www.uniprot.org/uniprot/P21980 denotes TGC
T8725 1578-1583 http://www.uniprot.org/uniprot/P04406 denotes GAPDH
T8724 1385-1390 http://www.uniprot.org/uniprot/P04406 denotes GAPDH
T8723 1274-1279 http://www.uniprot.org/uniprot/P04406 denotes GAPDH
T8722 1055-1060 http://www.uniprot.org/uniprot/P04406 denotes GAPDH
T8721 1008-1013 http://www.uniprot.org/uniprot/P04406 denotes GAPDH
T8720 981-1006 http://www.uniprot.org/uniprot/P04406 denotes 3-phosphate dehydrogenase
T8719 153-156 http://www.uniprot.org/uniprot/P09693 denotes CD3
T8718 153-156 http://www.uniprot.org/uniprot/P07766 denotes CD3
T8717 153-156 http://www.uniprot.org/uniprot/P04234 denotes CD3
T8716 153-156 http://www.uniprot.org/uniprot/P20963 denotes CD3
T8715 1555-1560 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T8714 1395-1400 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T8713 1284-1289 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T8712 910-915 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T8711 858-863 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T8710 18-23 http://www.uniprot.org/uniprot/Q16552 denotes IL-17

GO-BP

Id Subject Object Predicate Lexical cue
T8638 1075-1078 http://purl.obolibrary.org/obo/GO_0047801 denotes CGT
T8637 954-957 http://purl.obolibrary.org/obo/GO_0004069 denotes AAT
T8636 468-481 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T8635 379-392 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T8634 57-70 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T8633 460-481 http://purl.obolibrary.org/obo/GO_0001171 denotes reverse transcription
T8632 49-70 http://purl.obolibrary.org/obo/GO_0001171 denotes reverse transcription

GO-MF

Id Subject Object Predicate Lexical cue
T8673 1075-1078 http://purl.obolibrary.org/obo/GO_0047801 denotes CGT
T8672 954-957 http://purl.obolibrary.org/obo/GO_0004069 denotes AAT
T8671 906-912 http://purl.obolibrary.org/obo/GO_0005135 denotes 3'; IL
T8670 1555-1560 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T8669 1395-1400 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T8668 1284-1289 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T8667 910-915 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T8666 858-863 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T8665 18-23 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17

sentences

Id Subject Object Predicate Lexical cue
T8631 1498-1592 Sentence denotes The level of mRNA expression was presented as a ratio of IL-17 PCR product over GAPDH product.
T8630 1106-1497 Sentence denotes Reactions were processed in a DNA thermal cycler (Perkin-Elmer Cetus, Norwalk, CT, USA) through cycles for 30 s of denaturation at 94°C, 1 min of annealing at 56°C for GAPDH and IL-17, followed by 1 min of elongation at 72°C. PCR rounds were repeated for 25 cycles each for both GAPDH and IL-17; this was determined as falling within the exponential phase of amplification for each molecule.
T8629 786-1105 Sentence denotes The following sense and antisense primers for each molecules were used: IL-17 sense, 5'-ATG ACT CCT GGG AAG ACC TCA TTG-3'; IL-17 antisense, 5'-TTA GGC CAC ATG GTG GAC AAT CGG-3'; glyceraldehyde-3-phosphate dehydrogenase (GAPDH) sense, 5'-CGA TGC TGG GCG TGA GTA C-3'; GAPDH antisense, 5'-CGT TCA GCT CAG GGA TGA CC-3'.
T8628 667-785 Sentence denotes The reaction was performed in PCR buffer (1.5 mM MgCl2, 50 mM KCl, 10 mM Tris-HCl, pH 8.3) in a total volume of 25 μl.
T8627 513-666 Sentence denotes PCR amplification of cDNA aliquots was performed by adding 2.5 mM dNTPs, 2.5 U of Taq DNA polymerase (Takara) and 0.25 μM of sense and antisense primers.
T8626 371-512 Sentence denotes Reverse transcription of 2 μg of total mRNA was performed at 42°C using the Superscript™ reverse transcription system (Takara, Shiga, Japan).
T8625 216-370 Sentence denotes After 16 hours of incubation, mRNA was extracted with RNAzol B (Biotex Laboratories, Houston, TX, USA) in accordance with the manufacturer's instructions.
T8624 97-215 Sentence denotes PBMC were incubated with various concentrations of anti-CD3 in the presence or absence of inhibitors (LY294002, PDTC).
T8623 0-96 Sentence denotes Quantification of IL-17 mRNA by semiquantitative reverse transcription–polymerase chain reaction
T82 0-96 Sentence denotes Quantification of IL-17 mRNA by semiquantitative reverse transcription–polymerase chain reaction
T83 97-215 Sentence denotes PBMC were incubated with various concentrations of anti-CD3 in the presence or absence of inhibitors (LY294002, PDTC).
T84 216-370 Sentence denotes After 16 hours of incubation, mRNA was extracted with RNAzol B (Biotex Laboratories, Houston, TX, USA) in accordance with the manufacturer's instructions.
T85 371-512 Sentence denotes Reverse transcription of 2 μg of total mRNA was performed at 42°C using the Superscript™ reverse transcription system (Takara, Shiga, Japan).
T86 513-666 Sentence denotes PCR amplification of cDNA aliquots was performed by adding 2.5 mM dNTPs, 2.5 U of Taq DNA polymerase (Takara) and 0.25 μM of sense and antisense primers.
T87 667-785 Sentence denotes The reaction was performed in PCR buffer (1.5 mM MgCl2, 50 mM KCl, 10 mM Tris-HCl, pH 8.3) in a total volume of 25 μl.
T88 786-1105 Sentence denotes The following sense and antisense primers for each molecules were used: IL-17 sense, 5'-ATG ACT CCT GGG AAG ACC TCA TTG-3'; IL-17 antisense, 5'-TTA GGC CAC ATG GTG GAC AAT CGG-3'; glyceraldehyde-3-phosphate dehydrogenase (GAPDH) sense, 5'-CGA TGC TGG GCG TGA GTA C-3'; GAPDH antisense, 5'-CGT TCA GCT CAG GGA TGA CC-3'.
T89 1106-1331 Sentence denotes Reactions were processed in a DNA thermal cycler (Perkin-Elmer Cetus, Norwalk, CT, USA) through cycles for 30 s of denaturation at 94°C, 1 min of annealing at 56°C for GAPDH and IL-17, followed by 1 min of elongation at 72°C.
T90 1332-1497 Sentence denotes PCR rounds were repeated for 25 cycles each for both GAPDH and IL-17; this was determined as falling within the exponential phase of amplification for each molecule.
T91 1498-1592 Sentence denotes The level of mRNA expression was presented as a ratio of IL-17 PCR product over GAPDH product.

simple1

Id Subject Object Predicate Lexical cue
T8709 1578-1583 Protein denotes GAPDH
T8708 1555-1560 Protein denotes IL-17
T8707 1395-1400 Protein denotes IL-17
T8706 1385-1390 Protein denotes GAPDH
T8705 1284-1289 Protein denotes IL-17
T8704 1274-1279 Protein denotes GAPDH
T8703 1055-1060 Protein denotes GAPDH
T8702 1008-1013 Protein denotes GAPDH
T8701 966-1006 Protein denotes glyceraldehyde-3-phosphate dehydrogenase
T8700 858-863 Protein denotes IL-17
T8699 595-598 Protein denotes Taq
T8698 18-23 Protein denotes IL-17

DLUT931

Id Subject Object Predicate Lexical cue
T8753 1584-1591 Gene_expression denotes product
T8752 1061-1070 Negative_regulation denotes antisense
T8751 0-14 Positive_regulation denotes Quantification
T8750 1578-1583 Protein denotes GAPDH
T8749 1555-1560 Protein denotes IL-17
T8748 1385-1390 Protein denotes GAPDH
T8747 1395-1400 Protein denotes IL-17
T8746 1284-1289 Protein denotes IL-17
T8745 1274-1279 Protein denotes GAPDH
T8744 1055-1060 Protein denotes GAPDH
T8743 1008-1013 Protein denotes GAPDH
T8742 966-1006 Protein denotes glyceraldehyde-3-phosphate dehydrogenase
T8741 858-863 Protein denotes IL-17
T8740 595-598 Protein denotes Taq
T8739 18-23 Protein denotes IL-17
R4482 T8739 T8751 themeOf IL-17,Quantification
R4483 T8741 T8752 themeOf IL-17,antisense
R4484 T8744 T8752 themeOf GAPDH,antisense
R4485 T8750 T8753 themeOf GAPDH,product

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T9130 1022-1052 Protein denotes 5'-CGA TGC TGG GCG TGA GTA C-3
T9129 966-1014 Protein denotes glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
T9128 401-414 Protein denotes of total mRNA
T9127 890-893 Entity denotes AAG
T9126 1072-1101 Protein denotes 5'-CGT TCA GCT CAG GGA TGA CC
T9125 1284-1290 Protein denotes IL-17,
T9124 934-941 Protein denotes GGC CAC
T9123 950-961 Protein denotes GAC AAT CGG
T9122 1055-1070 Protein denotes GAPDH antisense
T9121 934-937 Protein denotes GGC
T9120 858-863 Protein denotes IL-17
T9119 942-949 Entity denotes ATG GTG
T9118 595-613 Protein denotes Taq DNA polymerase
T9117 579-583 Entity denotes dNTP
T9116 837-846 Entity denotes molecules
T9115 1552-1572 Protein denotes of IL-17 PCR product
T9114 697-700 Protein denotes PCR
T9113 734-757 Entity denotes 10 mM Tris-HCl, pH 8.3)
T9112 1395-1400 Protein denotes IL-17
T9111 1029-1032 Protein denotes TGC
T9110 1511-1515 Protein denotes mRNA
T9109 1024-1028 Protein denotes -CGA
T9166 1511-1526 Gene_expression denotes mRNA expression
T9165 1511-1526 Transcription denotes mRNA expression
T9164 246-264 Negative_regulation denotes mRNA was extracted
T9163 1578-1591 Entity denotes GAPDH product
T9162 878-881 Protein denotes ACT
T9161 886-905 Entity denotes GGG AAG ACC TCA TTG
T9160 1385-1390 Protein denotes GAPDH
T9159 1072-1101 Entity denotes 5'-CGT TCA GCT CAG GGA TGA CC
T9158 97-101 Entity denotes PBMC
T9157 1483-1496 Entity denotes each molecule
T9156 1072-1101 Protein denotes 5'-CGT TCA GCT CAG GGA TGA CC
T9155 199-208 Entity denotes LY294002,
T9154 1274-1279 Protein denotes GAPDH
T9153 590-613 Entity denotes U of Taq DNA polymerase
T9152 301-318 Protein denotes Houston, TX, USA)
T9151 184-214 Entity denotes of inhibitors (LY294002, PDTC)
T9150 1037-1040 Protein denotes GCG
T9149 734-757 Entity denotes 10 mM Tris-HCl, pH 8.3)
T9148 1008-1013 Protein denotes GAPDH
T9147 1578-1583 Protein denotes GAPDH
T9146 871-885 Entity denotes 5'-ATG ACT CCT
T9145 246-250 Protein denotes mRNA
T9144 716-733 Entity denotes MgCl2, 50 mM KCl,
T9143 723-732 Entity denotes 50 mM KCl
T9142 906-915 Protein denotes 3'; IL-17
T9141 396-414 Protein denotes 2 μg of total mRNA
T9140 595-598 Protein denotes Taq
T9139 1555-1560 Protein denotes IL-17
T9138 513-516 Protein denotes PCR
T9137 1332-1335 Protein denotes PCR
T9136 1176-1193 Protein denotes Norwalk, CT, USA)
T9135 145-156 Protein denotes of anti-CD3
T9134 1136-1139 Entity denotes DNA
T9133 886-905 Protein denotes GGG AAG ACC TCA TTG
T9132 18-23 Protein denotes IL-17
T9131 15-28 Protein denotes of IL-17 mRNA
R4819 T9110 T9165 themeOf mRNA,mRNA expression
R4820 T9110 T9166 themeOf mRNA,mRNA expression
R4821 T9145 T9164 themeOf mRNA,mRNA was extracted

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T9096 1591-1592 . denotes .
T9095 1584-1591 NN denotes product
T9094 1578-1583 NNP denotes GAPDH
T9093 1573-1577 IN denotes over
T9092 1565-1572 NN denotes product
T9091 1561-1564 NNP denotes PCR
T9090 1555-1560 NNP denotes IL-17
T9089 1552-1554 IN denotes of
T9088 1546-1551 NN denotes ratio
T9087 1544-1545 DT denotes a
T9086 1541-1543 IN denotes as
T9085 1531-1540 VBN denotes presented
T9084 1527-1530 VBD denotes was
T9083 1516-1526 NN denotes expression
T9082 1511-1515 NNP denotes mRNA
T9081 1508-1510 IN denotes of
T9080 1502-1507 NN denotes level
T9079 1498-1501 DT denotes The
T9078 1496-1497 . denotes .
T9077 1488-1496 NN denotes molecule
T9076 1483-1487 DT denotes each
T9075 1479-1482 IN denotes for
T9074 1465-1478 NN denotes amplification
T9073 1462-1464 IN denotes of
T9072 1456-1461 NN denotes phase
T9071 1444-1455 JJ denotes exponential
T9070 1440-1443 DT denotes the
T9069 1433-1439 IN denotes within
T9068 1425-1432 VBG denotes falling
T9067 1422-1424 IN denotes as
T9066 1411-1421 VBN denotes determined
T9065 1407-1410 VBD denotes was
T9064 1402-1406 DT denotes this
T9063 1400-1401 : denotes ;
T9062 1395-1400 NNP denotes IL-17
T9061 1391-1394 CC denotes and
T9060 1385-1390 NNP denotes GAPDH
T9059 1380-1384 DT denotes both
T9058 1376-1379 IN denotes for
T9057 1371-1375 DT denotes each
T9056 1364-1370 NNS denotes cycles
T9055 1361-1363 CD denotes 25
T9054 1357-1360 IN denotes for
T9053 1348-1356 VBN denotes repeated
T9052 1343-1347 VBD denotes were
T9051 1336-1342 NNS denotes rounds
T9050 1332-1335 NNP denotes PCR
T9049 1329-1331 NNP denotes C.
T9048 1328-1329 CD denotes °
T9047 1326-1328 CD denotes 72
T9046 1323-1325 IN denotes at
T9045 1312-1322 NN denotes elongation
T9044 1309-1311 IN denotes of
T9043 1305-1308 NN denotes min
T9042 1303-1304 CD denotes 1
T9041 1300-1302 IN denotes by
T9040 1291-1299 VBN denotes followed
T9039 1289-1290 , denotes ,
T9038 1284-1289 NNP denotes IL-17
T9037 1280-1283 CC denotes and
T9036 1274-1279 NNP denotes GAPDH
T9035 1270-1273 IN denotes for
T9034 1268-1269 NNP denotes C
T9033 1267-1268 CD denotes °
T9032 1265-1267 CD denotes 56
T9031 1262-1264 IN denotes at
T9030 1252-1261 VBG denotes annealing
T9029 1249-1251 IN denotes of
T9028 1245-1248 NN denotes min
T9027 1243-1244 CD denotes 1
T9026 1241-1242 , denotes ,
T9025 1240-1241 NNP denotes C
T9024 1239-1240 CD denotes °
T9023 1237-1239 CD denotes 94
T9022 1234-1236 IN denotes at
T9021 1221-1233 NN denotes denaturation
T9020 1218-1220 IN denotes of
T9019 1216-1217 PRP denotes s
T9018 1213-1215 CD denotes 30
T9017 1209-1212 IN denotes for
T9016 1202-1208 NNS denotes cycles
T9015 1194-1201 IN denotes through
T9014 1192-1193 -RRB- denotes )
T9013 1189-1192 NNP denotes USA
T9012 1187-1188 , denotes ,
T9011 1185-1187 NNP denotes CT
T9010 1183-1184 , denotes ,
T9009 1176-1183 NNP denotes Norwalk
T9008 1174-1175 , denotes ,
T9007 1169-1174 NNP denotes Cetus
T9006 1156-1168 NNP denotes Perkin-Elmer
T9005 1155-1156 -LRB- denotes (
T9004 1148-1154 NN denotes cycler
T9003 1140-1147 JJ denotes thermal
T9002 1136-1139 NNP denotes DNA
T9001 1134-1135 DT denotes a
T9000 1131-1133 IN denotes in
T8999 1121-1130 VBN denotes processed
T8998 1116-1120 VBD denotes were
T8997 1106-1115 NNS denotes Reactions
T8996 1104-1105 . denotes .
T8995 1103-1104 '' denotes '
T8994 1099-1103 NN denotes CC-3
T8993 1095-1098 NNP denotes TGA
T8992 1091-1094 NNP denotes GGA
T8991 1087-1090 NNP denotes CAG
T8990 1083-1086 NNP denotes GCT
T8989 1079-1082 NNP denotes TCA
T8988 1075-1078 NNP denotes CGT
T8987 1074-1075 : denotes -
T8986 1073-1074 '' denotes '
T8985 1072-1073 CD denotes 5
T8984 1070-1071 , denotes ,
T8983 1061-1070 NN denotes antisense
T8982 1055-1060 NNP denotes GAPDH
T8981 1053-1054 : denotes ;
T8980 1052-1053 '' denotes '
T8979 1049-1052 NN denotes C-3
T8978 1045-1048 NNP denotes GTA
T8977 1041-1044 NNP denotes TGA
T8976 1037-1040 NNP denotes GCG
T8975 1033-1036 NNP denotes TGG
T8974 1029-1032 NNP denotes TGC
T8973 1025-1028 NNP denotes CGA
T8972 1024-1025 : denotes -
T8971 1023-1024 '' denotes '
T8970 1022-1023 CD denotes 5
T8969 1020-1021 , denotes ,
T8968 1015-1020 NN denotes sense
T8967 1013-1014 -RRB- denotes )
T8966 1008-1013 NNP denotes GAPDH
T8965 1007-1008 -LRB- denotes (
T8964 993-1006 NN denotes dehydrogenase
T8963 966-992 JJ denotes glyceraldehyde-3-phosphate
T8962 964-965 : denotes ;
T8961 963-964 '' denotes '
T8960 958-963 NN denotes CGG-3
T8959 954-957 NNP denotes AAT
T8958 950-953 NNP denotes GAC
T8957 946-949 NNP denotes GTG
T8956 942-945 NNP denotes ATG
T8955 938-941 NNP denotes CAC
T8954 934-937 NNP denotes GGC
T8953 930-933 NNP denotes TTA
T8952 929-930 : denotes -
T8951 928-929 '' denotes '
T8950 927-928 CD denotes 5
T8949 925-926 , denotes ,
T8948 916-925 NN denotes antisense
T8947 910-915 NNP denotes IL-17
T8946 908-909 : denotes ;
T8945 907-908 '' denotes '
T8944 902-907 NN denotes TTG-3
T8943 898-901 NNP denotes TCA
T8942 894-897 NNP denotes ACC
T8941 890-893 NNP denotes AAG
T8940 886-889 NNP denotes GGG
T8939 882-885 NNP denotes CCT
T8938 878-881 NNP denotes ACT
T8937 874-877 NNP denotes ATG
T8936 873-874 : denotes -
T8935 872-873 '' denotes '
T8934 871-872 CD denotes 5
T8933 869-870 , denotes ,
T8932 864-869 NN denotes sense
T8931 858-863 JJ denotes IL-17
T8930 856-857 : denotes :
T8929 852-856 VBN denotes used
T8928 847-851 VBD denotes were
T8927 837-846 NNS denotes molecules
T8926 832-836 DT denotes each
T8925 828-831 IN denotes for
T8924 820-827 NNS denotes primers
T8923 810-819 JJ denotes antisense
T8922 806-809 CC denotes and
T8921 800-805 NN denotes sense
T8920 790-799 JJ denotes following
T8919 786-789 DT denotes The
T8918 784-785 . denotes .
T8917 782-784 NN denotes μl
T8916 779-781 CD denotes 25
T8915 776-778 IN denotes of
T8894 701-707 NN denotes buffer
T8893 697-700 NNP denotes PCR
T8892 694-696 IN denotes in
T8891 684-693 VBN denotes performed
T8890 680-683 VBD denotes was
T8889 671-679 NN denotes reaction
T8888 667-670 DT denotes The
T8887 665-666 . denotes .
T8886 658-665 NNS denotes primers
T8885 648-657 JJ denotes antisense
T8884 644-647 CC denotes and
T8883 638-643 NN denotes sense
T8882 635-637 IN denotes of
T8881 632-634 NNP denotes μM
T8880 627-631 CD denotes 0.25
T8879 623-626 CC denotes and
T8878 621-622 -RRB- denotes )
T8877 615-621 NNP denotes Takara
T8876 614-615 -LRB- denotes (
T8875 603-613 NN denotes polymerase
T8874 599-602 NNP denotes DNA
T8873 595-598 NNP denotes Taq
T8872 592-594 IN denotes of
T8871 590-591 NNP denotes U
T8870 586-589 CD denotes 2.5
T8869 584-585 , denotes ,
T8868 579-584 NNP denotes dNTPs
T8867 576-578 NNP denotes mM
T8866 572-575 CD denotes 2.5
T8865 565-571 VBG denotes adding
T8864 562-564 IN denotes by
T8863 552-561 VBN denotes performed
T8862 548-551 VBD denotes was
T8861 539-547 NNS denotes aliquots
T8860 534-538 NNP denotes cDNA
T8859 531-533 IN denotes of
T8858 517-530 NN denotes amplification
T8857 513-516 NNP denotes PCR
T8856 511-512 . denotes .
T8855 510-511 -RRB- denotes )
T8854 505-510 NNP denotes Japan
T8853 503-504 , denotes ,
T8852 498-503 NNP denotes Shiga
T8851 496-497 , denotes ,
T8850 490-496 NNP denotes Takara
T8849 489-490 -LRB- denotes (
T8848 482-488 NN denotes system
T8847 468-481 NN denotes transcription
T8846 460-467 NN denotes reverse
T8845 458-459 NN denotes
T8844 447-458 NNP denotes Superscript
T8843 443-446 DT denotes the
T8842 437-442 VBG denotes using
T8841 435-436 NNP denotes C
T8840 434-435 CD denotes °
T8839 432-434 CD denotes 42
T8838 429-431 IN denotes at
T8837 419-428 VBN denotes performed
T8836 415-418 VBD denotes was
T8835 410-414 NNP denotes mRNA
T8834 404-409 JJ denotes total
T8833 401-403 IN denotes of
T8832 398-400 NN denotes μg
T8831 396-397 CD denotes 2
T8830 393-395 IN denotes of
T8829 379-392 NN denotes transcription
T8828 371-378 VB denotes Reverse
T8827 369-370 . denotes .
T8826 357-369 NNS denotes instructions
T8825 354-356 POS denotes 's
T8824 342-354 NN denotes manufacturer
T8823 338-341 DT denotes the
T8822 333-337 IN denotes with
T8821 322-332 NN denotes accordance
T8820 319-321 IN denotes in
T8819 317-318 -RRB- denotes )
T8818 314-317 NNP denotes USA
T8817 312-313 , denotes ,
T8816 310-312 NNP denotes TX
T8815 308-309 , denotes ,
T8814 301-308 NNP denotes Houston
T8813 299-300 , denotes ,
T8812 287-299 NNPS denotes Laboratories
T8811 280-286 NNP denotes Biotex
T8810 279-280 -LRB- denotes (
T8809 277-278 NNP denotes B
T8808 270-276 NNP denotes RNAzol
T8807 265-269 IN denotes with
T8806 255-264 VBN denotes extracted
T8805 251-254 VBD denotes was
T8804 246-250 NNP denotes mRNA
T8803 244-245 , denotes ,
T8802 234-244 NN denotes incubation
T8801 231-233 IN denotes of
T8800 225-230 NNS denotes hours
T8799 222-224 CD denotes 16
T8798 216-221 IN denotes After
T8797 214-215 . denotes .
T8796 213-214 -RRB- denotes )
T8795 209-213 NNP denotes PDTC
T8794 207-208 , denotes ,
T8793 199-207 CD denotes LY294002
T8792 198-199 -LRB- denotes (
T8791 187-197 NNS denotes inhibitors
T8790 184-186 IN denotes of
T8789 176-183 NN denotes absence
T8788 173-175 CC denotes or
T8787 164-172 NN denotes presence
T8786 160-163 DT denotes the
T8785 157-159 IN denotes in
T8784 148-156 JJ denotes anti-CD3
T8783 145-147 IN denotes of
T8782 130-144 NNS denotes concentrations
T8781 122-129 JJ denotes various
T8780 117-121 IN denotes with
T8779 107-116 VBN denotes incubated
T8778 102-106 VBD denotes were
T8777 97-101 NNP denotes PBMC
T8776 88-96 NN denotes reaction
T8775 82-87 NN denotes chain
T8774 71-81 NN denotes polymerase
T8773 57-70 NN denotes transcription
T8772 49-56 NN denotes reverse
T8771 32-48 JJ denotes semiquantitative
T8770 29-31 IN denotes by
T8769 24-28 NNP denotes mRNA
T8768 18-23 NNP denotes IL-17
T8767 15-17 IN denotes of
T8766 0-14 NN denotes Quantification
T8914 769-775 NN denotes volume
T8913 763-768 JJ denotes total
T8912 761-762 DT denotes a
T8911 758-760 IN denotes in
T8910 756-757 -RRB- denotes )
T8909 753-756 CD denotes 8.3
T8908 750-752 NNP denotes pH
T8907 748-749 , denotes ,
T8906 740-748 NNP denotes Tris-HCl
T8905 737-739 NNP denotes mM
T8904 734-736 CD denotes 10
T8903 732-733 , denotes ,
T8902 729-732 NNP denotes KCl
T8901 726-728 NNP denotes mM
T8900 723-725 CD denotes 50
T8899 721-722 , denotes ,
T8898 716-721 NNP denotes MgCl2
T8897 713-715 NNP denotes mM
T8896 709-712 CD denotes 1.5
T8895 708-709 -LRB- denotes (
R4659 T8938 T8944 compound ACT,TTG-3
R4660 T8939 T8941 compound CCT,AAG
R4661 T8940 T8941 compound GGG,AAG
R4662 T8941 T8944 compound AAG,TTG-3
R4663 T8942 T8944 compound ACC,TTG-3
R4664 T8943 T8944 compound TCA,TTG-3
R4487 T8766 T8779 nsubjpass Quantification,incubated
R4488 T8767 T8766 prep of,Quantification
R4489 T8768 T8769 compound IL-17,mRNA
R4490 T8769 T8767 pobj mRNA,of
R4491 T8770 T8766 prep by,Quantification
R4492 T8771 T8773 amod semiquantitative,transcription
R4493 T8772 T8773 compound reverse,transcription
R4494 T8773 T8770 pobj transcription,by
R4495 T8774 T8776 compound polymerase,reaction
R4496 T8775 T8776 compound chain,reaction
R4497 T8776 T8777 compound reaction,PBMC
R4498 T8777 T8766 conj PBMC,Quantification
R4499 T8778 T8779 auxpass were,incubated
R4500 T8779 T8779 ROOT incubated,incubated
R4501 T8780 T8779 prep with,incubated
R4502 T8781 T8782 amod various,concentrations
R4503 T8782 T8780 pobj concentrations,with
R4504 T8783 T8782 prep of,concentrations
R4505 T8784 T8783 pobj anti-CD3,of
R4506 T8785 T8782 prep in,concentrations
R4507 T8786 T8787 det the,presence
R4508 T8787 T8785 pobj presence,in
R4509 T8788 T8787 cc or,presence
R4510 T8789 T8787 conj absence,presence
R4511 T8790 T8789 prep of,absence
R4512 T8791 T8790 pobj inhibitors,of
R4513 T8792 T8791 punct (,inhibitors
R4514 T8793 T8791 appos LY294002,inhibitors
R4515 T8794 T8791 punct ",",inhibitors
R4516 T8795 T8791 appos PDTC,inhibitors
R4517 T8796 T8791 punct ),inhibitors
R4518 T8797 T8779 punct .,incubated
R4519 T8798 T8806 prep After,extracted
R4520 T8799 T8800 nummod 16,hours
R4521 T8800 T8798 pobj hours,After
R4522 T8801 T8800 prep of,hours
R4523 T8802 T8801 pobj incubation,of
R4524 T8803 T8806 punct ",",extracted
R4525 T8804 T8806 nsubjpass mRNA,extracted
R4526 T8805 T8806 auxpass was,extracted
R4527 T8806 T8806 ROOT extracted,extracted
R4528 T8807 T8806 prep with,extracted
R4529 T8808 T8809 compound RNAzol,B
R4530 T8809 T8807 pobj B,with
R4531 T8810 T8812 punct (,Laboratories
R4532 T8811 T8812 compound Biotex,Laboratories
R4533 T8812 T8809 appos Laboratories,B
R4534 T8813 T8812 punct ",",Laboratories
R4535 T8814 T8812 conj Houston,Laboratories
R4536 T8815 T8814 punct ",",Houston
R4537 T8816 T8814 conj TX,Houston
R4538 T8817 T8816 punct ",",TX
R4539 T8818 T8816 conj USA,TX
R4540 T8819 T8812 punct ),Laboratories
R4541 T8820 T8806 prep in,extracted
R4542 T8821 T8820 pobj accordance,in
R4543 T8822 T8821 prep with,accordance
R4544 T8823 T8824 det the,manufacturer
R4545 T8824 T8826 poss manufacturer,instructions
R4546 T8825 T8824 case 's,manufacturer
R4547 T8826 T8822 pobj instructions,with
R4548 T8827 T8806 punct .,extracted
R4549 T8828 T8828 ROOT Reverse,Reverse
R4550 T8829 T8837 nsubjpass transcription,performed
R4551 T8830 T8829 prep of,transcription
R4552 T8831 T8832 nummod 2,μg
R4553 T8832 T8830 pobj μg,of
R4554 T8833 T8832 prep of,μg
R4555 T8834 T8835 amod total,mRNA
R4556 T8835 T8833 pobj mRNA,of
R4557 T8836 T8837 auxpass was,performed
R4558 T8837 T8828 ccomp performed,Reverse
R4559 T8838 T8837 prep at,performed
R4560 T8839 T8840 nummod 42,°
R4561 T8840 T8841 nummod °,C
R4562 T8841 T8838 pobj C,at
R4563 T8842 T8837 advcl using,performed
R4564 T8843 T8848 det the,system
R4565 T8844 T8848 nmod Superscript,system
R4566 T8845 T8848 compound ™,system
R4567 T8846 T8848 compound reverse,system
R4568 T8847 T8848 compound transcription,system
R4569 T8848 T8842 dobj system,using
R4570 T8849 T8848 punct (,system
R4571 T8850 T8848 appos Takara,system
R4572 T8851 T8850 punct ",",Takara
R4573 T8852 T8850 conj Shiga,Takara
R4574 T8853 T8852 punct ",",Shiga
R4575 T8854 T8852 npadvmod Japan,Shiga
R4576 T8855 T8852 punct ),Shiga
R4577 T8856 T8828 punct .,Reverse
R4578 T8857 T8858 compound PCR,amplification
R4579 T8858 T8863 nsubjpass amplification,performed
R4580 T8859 T8858 prep of,amplification
R4581 T8860 T8861 compound cDNA,aliquots
R4582 T8861 T8859 pobj aliquots,of
R4583 T8862 T8863 auxpass was,performed
R4584 T8863 T8863 ROOT performed,performed
R4585 T8864 T8863 prep by,performed
R4586 T8865 T8864 pcomp adding,by
R4587 T8866 T8868 nummod 2.5,dNTPs
R4588 T8867 T8868 compound mM,dNTPs
R4589 T8868 T8865 dobj dNTPs,adding
R4590 T8869 T8871 punct ",",U
R4591 T8870 T8871 nummod 2.5,U
R4592 T8871 T8868 appos U,dNTPs
R4593 T8872 T8871 prep of,U
R4594 T8873 T8875 compound Taq,polymerase
R4595 T8874 T8875 compound DNA,polymerase
R4596 T8875 T8872 pobj polymerase,of
R4597 T8876 T8877 punct (,Takara
R4598 T8877 T8875 appos Takara,polymerase
R4599 T8878 T8871 punct ),U
R4632 T8911 T8891 prep in,performed
R4633 T8912 T8914 det a,volume
R4634 T8913 T8914 amod total,volume
R4635 T8914 T8911 pobj volume,in
R4636 T8915 T8914 prep of,volume
R4637 T8916 T8917 nummod 25,μl
R4638 T8917 T8915 pobj μl,of
R4639 T8918 T8891 punct .,performed
R4640 T8919 T8921 det The,sense
R4641 T8920 T8921 amod following,sense
R4642 T8921 T8929 nsubjpass sense,used
R4700 T8979 T8948 appos C-3,antisense
R4701 T8980 T8979 case ',C-3
R4702 T8981 T8948 punct ;,antisense
R4703 T8982 T8983 compound GAPDH,antisense
R4704 T8983 T8948 appos antisense,antisense
R4705 T8984 T8983 punct ",",antisense
R4706 T8985 T8994 nummod 5,CC-3
R4707 T8986 T8994 punct ',CC-3
R4708 T8987 T8994 punct -,CC-3
R4709 T8988 T8994 compound CGT,CC-3
R4710 T8989 T8994 compound TCA,CC-3
R4711 T8990 T8994 compound GCT,CC-3
R4712 T8991 T8994 compound CAG,CC-3
R4713 T8992 T8994 compound GGA,CC-3
R4714 T8993 T8994 compound TGA,CC-3
R4715 T8994 T8948 appos CC-3,antisense
R4716 T8995 T8994 punct ',CC-3
R4717 T8996 T8929 punct .,used
R4718 T8997 T8999 nsubjpass Reactions,processed
R4740 T9019 T8999 dep s,processed
R4741 T9020 T9019 prep of,s
R4742 T9021 T9020 pobj denaturation,of
R4743 T9022 T8999 prep at,processed
R4744 T9023 T9024 nummod 94,°
R4745 T9024 T9025 nummod °,C
R4746 T9025 T9022 pobj C,at
R4747 T9026 T9025 punct ",",C
R4748 T9027 T9028 nummod 1,min
R4749 T9028 T9040 nsubj min,followed
R4750 T9029 T9028 prep of,min
R4751 T9030 T9029 pcomp annealing,of
R4752 T9031 T9030 prep at,annealing
R4753 T9032 T9034 nummod 56,C
R4754 T9033 T9034 nummod °,C
R4755 T9034 T9031 pobj C,at
R4756 T9035 T9034 prep for,C
R4757 T9036 T9035 pobj GAPDH,for
R4758 T9037 T9036 cc and,GAPDH
R4759 T9038 T9036 conj IL-17,GAPDH
R4760 T9039 T9034 punct ",",C
R4761 T9040 T8999 advcl followed,processed
R4762 T9041 T9040 prep by,followed
R4763 T9042 T9043 nummod 1,min
R4764 T9043 T9041 pobj min,by
R4765 T9044 T9043 prep of,min
R4766 T9045 T9044 pobj elongation,of
R4767 T9046 T9043 prep at,min
R4768 T9047 T9048 nummod 72,°
R4769 T9048 T9051 nummod °,rounds
R4770 T9049 T9050 compound C.,PCR
R4771 T9050 T9051 compound PCR,rounds
R4772 T9051 T9046 pobj rounds,at
R4773 T9052 T9053 auxpass were,repeated
R4774 T9053 T8999 conj repeated,processed
R4775 T9054 T9053 prep for,repeated
R4776 T9055 T9056 nummod 25,cycles
R4777 T9056 T9054 pobj cycles,for
R4778 T9057 T9063 acomp each,;
R4779 T9058 T9057 prep for,each
R4780 T9059 T9060 det both,GAPDH
R4781 T9060 T9058 pobj GAPDH,for
R4782 T9061 T9060 cc and,GAPDH
R4783 T9062 T9060 conj IL-17,GAPDH
R4784 T9063 T9066 punct ;,determined
R4785 T9064 T9066 nsubjpass this,determined
R4786 T9065 T9066 auxpass was,determined
R4787 T9066 T9066 ROOT determined,determined
R4788 T9067 T9066 prep as,determined
R4789 T9068 T9067 pcomp falling,as
R4790 T9069 T9068 prep within,falling
R4791 T9070 T9072 det the,phase
R4792 T9071 T9072 amod exponential,phase
R4793 T9072 T9069 pobj phase,within
R4794 T9073 T9072 prep of,phase
R4795 T9074 T9073 pobj amplification,of
R4796 T9075 T9068 prep for,falling
R4797 T9076 T9077 det each,molecule
R4798 T9077 T9075 pobj molecule,for
R4799 T9078 T9066 punct .,determined
R4800 T9079 T9080 det The,level
R4801 T9080 T9085 nsubjpass level,presented
R4802 T9081 T9080 prep of,level
R4803 T9082 T9083 compound mRNA,expression
R4804 T9083 T9081 pobj expression,of
R4805 T9084 T9085 auxpass was,presented
R4806 T9085 T9085 ROOT presented,presented
R4807 T9086 T9085 prep as,presented
R4808 T9087 T9088 det a,ratio
R4809 T9088 T9086 pobj ratio,as
R4810 T9089 T9088 prep of,ratio
R4811 T9090 T9092 compound IL-17,product
R4812 T9091 T9092 compound PCR,product
R4813 T9092 T9089 pobj product,of
R4814 T9093 T9088 prep over,ratio
R4815 T9094 T9095 compound GAPDH,product
R4816 T9095 T9093 pobj product,over
R4817 T9096 T9085 punct .,presented
R4600 T8879 T8871 cc and,U
R4601 T8880 T8881 nummod 0.25,μM
R4602 T8881 T8871 conj μM,U
R4603 T8882 T8881 prep of,μM
R4604 T8883 T8882 pobj sense,of
R4605 T8884 T8883 cc and,sense
R4606 T8885 T8886 amod antisense,primers
R4607 T8886 T8883 conj primers,sense
R4608 T8887 T8863 punct .,performed
R4609 T8888 T8889 det The,reaction
R4610 T8889 T8891 nsubjpass reaction,performed
R4611 T8890 T8891 auxpass was,performed
R4612 T8891 T8891 ROOT performed,performed
R4613 T8892 T8891 prep in,performed
R4614 T8893 T8894 compound PCR,buffer
R4615 T8894 T8892 pobj buffer,in
R4616 T8895 T8898 punct (,MgCl2
R4617 T8896 T8898 nummod 1.5,MgCl2
R4618 T8897 T8898 compound mM,MgCl2
R4619 T8898 T8894 appos MgCl2,buffer
R4620 T8899 T8898 punct ",",MgCl2
R4621 T8900 T8902 nummod 50,KCl
R4622 T8901 T8902 compound mM,KCl
R4623 T8902 T8898 appos KCl,MgCl2
R4624 T8903 T8902 punct ",",KCl
R4625 T8904 T8906 nummod 10,Tris-HCl
R4626 T8905 T8906 compound mM,Tris-HCl
R4627 T8906 T8902 conj Tris-HCl,KCl
R4628 T8907 T8906 punct ",",Tris-HCl
R4629 T8908 T8906 appos pH,Tris-HCl
R4630 T8909 T8908 nummod 8.3,pH
R4631 T8910 T8906 punct ),Tris-HCl
R4643 T8922 T8921 cc and,sense
R4644 T8923 T8924 amod antisense,primers
R4645 T8924 T8921 conj primers,sense
R4646 T8925 T8924 prep for,primers
R4647 T8926 T8927 det each,molecules
R4648 T8927 T8925 pobj molecules,for
R4649 T8928 T8929 auxpass were,used
R4650 T8929 T8929 ROOT used,used
R4651 T8930 T8932 punct :,sense
R4652 T8931 T8932 amod IL-17,sense
R4653 T8932 T8929 dobj sense,used
R4654 T8933 T8932 punct ",",sense
R4655 T8934 T8944 nummod 5,TTG-3
R4656 T8935 T8937 punct ',ATG
R4657 T8936 T8937 punct -,ATG
R4658 T8937 T8944 compound ATG,TTG-3
R4665 T8944 T8932 appos TTG-3,sense
R4666 T8945 T8944 case ',TTG-3
R4667 T8946 T8932 punct ;,sense
R4668 T8947 T8948 compound IL-17,antisense
R4669 T8948 T8932 conj antisense,sense
R4670 T8949 T8948 punct ",",antisense
R4671 T8950 T8948 appos 5,antisense
R4672 T8951 T8950 punct ',5
R4673 T8952 T8954 punct -,GGC
R4674 T8953 T8954 compound TTA,GGC
R4675 T8954 T8960 compound GGC,CGG-3
R4676 T8955 T8960 compound CAC,CGG-3
R4677 T8956 T8960 compound ATG,CGG-3
R4678 T8957 T8960 compound GTG,CGG-3
R4679 T8958 T8960 compound GAC,CGG-3
R4680 T8959 T8960 compound AAT,CGG-3
R4681 T8960 T8948 appos CGG-3,antisense
R4682 T8961 T8948 punct ',antisense
R4683 T8962 T8948 punct ;,antisense
R4684 T8963 T8964 amod glyceraldehyde-3-phosphate,dehydrogenase
R4685 T8964 T8948 appos dehydrogenase,antisense
R4686 T8965 T8966 punct (,GAPDH
R4687 T8966 T8964 appos GAPDH,dehydrogenase
R4688 T8967 T8966 punct ),GAPDH
R4689 T8968 T8948 conj sense,antisense
R4690 T8969 T8948 punct ",",antisense
R4691 T8970 T8948 appos 5,antisense
R4692 T8971 T8970 punct ',5
R4693 T8972 T8979 punct -,C-3
R4694 T8973 T8979 compound CGA,C-3
R4695 T8974 T8979 compound TGC,C-3
R4696 T8975 T8979 compound TGG,C-3
R4697 T8976 T8979 compound GCG,C-3
R4698 T8977 T8979 compound TGA,C-3
R4699 T8978 T8979 compound GTA,C-3
R4719 T8998 T8999 auxpass were,processed
R4720 T8999 T9066 ccomp processed,determined
R4721 T9000 T8999 prep in,processed
R4722 T9001 T9004 det a,cycler
R4723 T9002 T9004 nmod DNA,cycler
R4724 T9003 T9004 amod thermal,cycler
R4725 T9004 T9000 pobj cycler,in
R4726 T9005 T9007 punct (,Cetus
R4727 T9006 T9007 compound Perkin-Elmer,Cetus
R4728 T9007 T9004 appos Cetus,cycler
R4729 T9008 T9007 punct ",",Cetus
R4730 T9009 T9007 npadvmod Norwalk,Cetus
R4731 T9010 T9009 punct ",",Norwalk
R4732 T9011 T9009 conj CT,Norwalk
R4733 T9012 T9011 punct ",",CT
R4734 T9013 T9011 conj USA,CT
R4735 T9014 T9007 punct ),Cetus
R4736 T9015 T8999 prep through,processed
R4737 T9016 T9015 pobj cycles,through
R4738 T9017 T8999 prep for,processed
R4739 T9018 T9017 pobj 30,for

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T8697 1584-1591 Gene_expression denotes product
T8696 1578-1583 Protein denotes GAPDH
T8695 1395-1400 Protein denotes IL-17
T8694 1385-1390 Protein denotes GAPDH
T8693 1284-1289 Protein denotes IL-17
T8692 1274-1279 Protein denotes GAPDH
T8691 1055-1060 Protein denotes GAPDH
T8690 1008-1013 Protein denotes GAPDH
T8689 966-1006 Protein denotes glyceraldehyde-3-phosphate dehydrogenase
T8688 595-613 Protein denotes Taq DNA polymerase
T8687 148-156 Protein denotes anti-CD3
T8686 18-28 Protein denotes IL-17 mRNA
R4481 T8696 T8697 themeOf GAPDH,product

testone

Id Subject Object Predicate Lexical cue
T8193 1511-1526 Transcription denotes mRNA expression
T8192 1578-1583 Protein denotes GAPDH
T8191 1555-1560 Protein denotes IL-17
T8190 1395-1400 Protein denotes IL-17
T8189 1385-1390 Protein denotes GAPDH
T8188 1284-1289 Protein denotes IL-17
T8187 1274-1279 Protein denotes GAPDH
T8186 1055-1060 Protein denotes GAPDH
T8185 1008-1013 Protein denotes GAPDH
T8184 966-1006 Protein denotes glyceraldehyde-3-phosphate dehydrogenase
T8183 858-863 Protein denotes IL-17
T8182 595-598 Protein denotes Taq
T8181 18-23 Protein denotes IL-17
R4470 T8185 T8184 equivalentTo GAPDH,glyceraldehyde-3-phosphate dehydrogenase
R4471 T8191 T8193 themeOf IL-17,mRNA expression
R4472 T8192 T8193 themeOf GAPDH,mRNA expression