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PMC:1064895 / 10195-10453 JSONTXT

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biosemtest

Id Subject Object Predicate Lexical cue
T7491 129-135 UMLS/C1548982 denotes ain an
T7490 11-18 UMLS/C1548982 denotes ng, str
T7475 230-235 UMLS/C1719918 denotes deve
T7474 194-199 UMLS/C1719918 denotes ssolv
T7473 90-95 UMLS/C1719918 denotes s inc
T7458 5-10 UMLS/C0231290 denotes wash
T7456 79-88 UMLS/C0301869 denotes (Sigma)
T7453 115-122 UMLS/C1292425 denotes then wa
T7441 252-257 UMLS/C1880121 denotes ction
T7435 230-235 UMLS/C0227391 denotes deve
T7434 194-199 UMLS/C0227391 denotes ssolv
T7433 90-95 UMLS/C0227391 denotes s inc
T7421 252-257 UMLS/C0009399 denotes ction
T7369 252-257 UMLS/C1552079 denotes ction
T7368 79-88 UMLS/C0522529 denotes (Sigma)
T7367 115-122 UMLS/C1547059 denotes then wa
T7351 169-192 UMLS/C0134796 denotes enyl phosphate (Sigma)
T7348 56-78 UMLS/C0019941 denotes sh peroxidase conjugat
T7340 252-257 UMLS/C1550604 denotes ction
T7339 252-257 UMLS/C0009393 denotes ction
T7335 146-155 UMLS/C1439852 denotes with 1 m
T7334 101-110 UMLS/C1439852 denotes for 2 ho
T7329 252-257 UMLS/C0013343 denotes ction
T7320 201-210 UMLS/C1549535 denotes in dieth
T7299 252-257 UMLS/C1704457 denotes ction
T7297 237-239 UMLS/C0319022 denotes p
T7279 35-43 UMLS/C1979842 denotes e phosph
T7269 214-228 UMLS/C0057919 denotes amine (Sigma)
T7262 252-257 UMLS/C1705245 denotes ction
T7416 5-10 UMLS/C0687676 denotes wash
T7408 252-257 UMLS/C1547016 denotes ction

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7685 249-257 NN denotes reaction
T7684 243-248 NN denotes color
T7683 239-242 DT denotes the
T7682 231-238 VB denotes develop
T7681 228-230 TO denotes to
T7680 226-227 -RRB- denotes )
T7679 221-226 NN denotes Sigma
T7678 220-221 -LRB- denotes (
T7677 205-219 NN denotes diethanolamine
T7676 202-204 IN denotes in
T7675 192-201 VB denotes dissolved
T7674 190-191 -RRB- denotes )
T7673 185-190 NN denotes Sigma
T7672 184-185 -LRB- denotes (
T7671 174-183 NN denotes phosphate
T7670 160-173 NN denotes p-nitrophenyl
T7669 154-159 NN denotes mg/ml
T7668 152-153 CD denotes 1
T7667 147-151 IN denotes with
T7666 137-146 VB denotes incubated
T7665 133-136 CC denotes and
T7664 127-132 RB denotes again
T7663 120-126 VB denotes washed
T7662 115-119 RB denotes then
T7661 113-114 -COMMA- denotes ,
T7660 108-113 NN denotes hours
T7659 106-107 CD denotes 2
T7658 102-105 IN denotes for
T7657 92-101 VB denotes incubated
T7656 88-91 VB denotes was
T7655 86-87 -RRB- denotes )
T7654 81-86 NN denotes Sigma
T7653 80-81 -LRB- denotes (
T7652 70-79 NN denotes conjugate
T7651 59-69 NN denotes peroxidase
T7650 37-58 JJ denotes phosphate–horseradish
T7649 15-36 JJ denotes streptavidin–alkaline
T7648 13-14 -COMMA- denotes ,
T7647 6-13 VB denotes washing
T7646 0-5 IN denotes After
R4069 T7647 T7646 arg2Of washing,After
R4070 T7652 T7649 arg1Of conjugate,streptavidin–alkaline
R4071 T7652 T7650 arg1Of conjugate,phosphate–horseradish
R4072 T7652 T7651 arg1Of conjugate,peroxidase
R4073 T7652 T7653 arg1Of conjugate,(
R4074 T7652 T7656 arg1Of conjugate,was
R4075 T7652 T7657 arg2Of conjugate,incubated
R4076 T7652 T7663 arg1Of conjugate,washed
R4077 T7652 T7666 arg2Of conjugate,incubated
R4078 T7654 T7653 arg2Of Sigma,(
R4079 T7655 T7653 arg3Of ),(
R4080 T7657 T7656 arg2Of incubated,was
R4081 T7657 T7658 arg1Of incubated,for
R4082 T7657 T7661 arg1Of incubated,","
R4083 T7660 T7658 arg2Of hours,for
R4084 T7660 T7659 arg1Of hours,2
R4085 T7661 T7665 arg1Of ",",and
R4086 T7663 T7661 arg2Of washed,","
R4087 T7663 T7662 arg1Of washed,then
R4088 T7663 T7664 arg1Of washed,again
R4089 T7665 T7647 arg2Of and,washing
R4090 T7665 T7648 arg1Of and,","
R4091 T7666 T7665 arg2Of incubated,and
R4092 T7666 T7667 arg1Of incubated,with
R4093 T7669 T7667 arg2Of mg/ml,with
R4094 T7669 T7668 arg1Of mg/ml,1
R4095 T7671 T7647 arg1Of phosphate,washing
R4096 T7671 T7670 arg1Of phosphate,p-nitrophenyl
R4097 T7671 T7672 arg1Of phosphate,(
R4098 T7671 T7675 arg2Of phosphate,dissolved
R4099 T7673 T7672 arg2Of Sigma,(
R4100 T7674 T7672 arg3Of ),(
R4101 T7675 T7646 arg1Of dissolved,After
R4102 T7675 T7676 arg1Of dissolved,in
R4103 T7675 T7681 modOf dissolved,to
R4104 T7677 T7676 arg2Of diethanolamine,in
R4105 T7677 T7678 arg1Of diethanolamine,(
R4106 T7679 T7678 arg2Of Sigma,(
R4107 T7680 T7678 arg3Of ),(
R4108 T7682 T7681 arg1Of develop,to
R4109 T7685 T7682 arg2Of reaction,develop
R4110 T7685 T7683 arg1Of reaction,the
R4111 T7685 T7684 arg1Of reaction,color

sentences

Id Subject Object Predicate Lexical cue
T7497 0-258 Sentence denotes After washing, streptavidin–alkaline phosphate–horseradish peroxidase conjugate (Sigma) was incubated for 2 hours, then washed again and incubated with 1 mg/ml p-nitrophenyl phosphate (Sigma) dissolved in diethanolamine (Sigma) to develop the color reaction.
T77 0-258 Sentence denotes After washing, streptavidin–alkaline phosphate–horseradish peroxidase conjugate (Sigma) was incubated for 2 hours, then washed again and incubated with 1 mg/ml p-nitrophenyl phosphate (Sigma) dissolved in diethanolamine (Sigma) to develop the color reaction.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8151 221-226 Protein denotes Sigma
T8148 15-69 Protein denotes streptavidin–alkaline phosphate–horseradish peroxidase
T8147 174-191 Entity denotes phosphate (Sigma)
T8140 81-86 Protein denotes Sigma
T8138 205-227 Entity denotes diethanolamine (Sigma)
T8133 185-190 Protein denotes Sigma
T8132 70-87 Entity denotes conjugate (Sigma)
T8128 157-227 Entity denotes ml p-nitrophenyl phosphate (Sigma) dissolved in diethanolamine (Sigma)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8033 257-258 . denotes .
T8032 249-257 NN denotes reaction
T8031 243-248 NN denotes color
T8030 239-242 DT denotes the
T8029 231-238 VB denotes develop
T8028 228-230 TO denotes to
T8014 147-151 IN denotes with
T8013 137-146 VBN denotes incubated
T8012 133-136 CC denotes and
T8011 127-132 RB denotes again
T8010 120-126 VBD denotes washed
T8009 115-119 RB denotes then
T8008 113-114 , denotes ,
T8007 108-113 NNS denotes hours
T8006 106-107 CD denotes 2
T8005 102-105 IN denotes for
T8004 92-101 VBN denotes incubated
T8003 88-91 VBD denotes was
T8002 86-87 -RRB- denotes )
T8001 81-86 NNP denotes Sigma
T8000 80-81 -LRB- denotes (
T7999 70-79 NN denotes conjugate
T7998 59-69 JJ denotes peroxidase
T7997 47-58 JJ denotes horseradish
T7996 37-46 NN denotes phosphate
T7995 28-36 JJ denotes alkaline
T7994 15-27 NNP denotes streptavidin
T7993 13-14 , denotes ,
T7992 6-13 VBG denotes washing
T7991 0-5 IN denotes After
T8027 226-227 -RRB- denotes )
T8026 221-226 NNP denotes Sigma
T8025 220-221 -LRB- denotes (
T8024 205-219 NN denotes diethanolamine
T8023 202-204 IN denotes in
T8022 192-201 VBN denotes dissolved
T8021 190-191 -RRB- denotes )
T8020 185-190 NNP denotes Sigma
T8019 184-185 -LRB- denotes (
T8018 174-183 NN denotes phosphate
T8017 160-173 NN denotes p-nitrophenyl
T8016 154-159 NN denotes mg/ml
T8015 152-153 CD denotes 1
R4342 T7991 T8004 prep After,incubated
R4343 T7992 T7991 pcomp washing,After
R4344 T7993 T8004 punct ",",incubated
R4345 T7994 T8004 nsubjpass streptavidin,incubated
R4346 T7995 T7996 amod alkaline,phosphate
R4347 T7996 T8003 nsubj phosphate,was
R4348 T7997 T7999 amod horseradish,conjugate
R4349 T7998 T7999 amod peroxidase,conjugate
R4350 T7999 T7996 appos conjugate,phosphate
R4351 T8000 T8001 punct (,Sigma
R4352 T8001 T7999 appos Sigma,conjugate
R4353 T8002 T7999 punct ),conjugate
R4354 T8003 T8004 auxpass was,incubated
R4355 T8004 T8004 ROOT incubated,incubated
R4356 T8005 T8004 prep for,incubated
R4357 T8006 T8007 nummod 2,hours
R4358 T8007 T8005 pobj hours,for
R4359 T8008 T8010 punct ",",washed
R4360 T8009 T8010 advmod then,washed
R4361 T8010 T8004 dep washed,incubated
R4362 T8011 T8010 advmod again,washed
R4363 T8012 T8010 cc and,washed
R4364 T8013 T8010 conj incubated,washed
R4365 T8014 T8013 prep with,incubated
R4366 T8015 T8016 nummod 1,mg/ml
R4367 T8016 T8018 nmod mg/ml,phosphate
R4368 T8017 T8018 compound p-nitrophenyl,phosphate
R4369 T8018 T8014 pobj phosphate,with
R4370 T8019 T8020 punct (,Sigma
R4371 T8020 T8018 appos Sigma,phosphate
R4372 T8021 T8013 punct ),incubated
R4373 T8022 T8010 conj dissolved,washed
R4374 T8023 T8022 prep in,dissolved
R4375 T8024 T8023 pobj diethanolamine,in
R4376 T8025 T8026 punct (,Sigma
R4377 T8026 T8024 appos Sigma,diethanolamine
R4378 T8027 T8024 punct ),diethanolamine
R4379 T8028 T8029 aux to,develop
R4380 T8029 T8022 advcl develop,dissolved
R4381 T8030 T8032 det the,reaction
R4382 T8031 T8032 compound color,reaction
R4383 T8032 T8029 dobj reaction,develop
R4384 T8033 T8004 punct .,incubated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7799 59-69 Protein denotes peroxidase