PMC:1064873 / 8629-8819
Annnotations
LappsTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7327 | 108-113 | Protein | denotes | DNase |
| T7326 | 92-103 | Protein | denotes | collagenase |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 15535835-9182920-4156886 | 27-29 | 9182920 | denotes | 27 |
biosemtest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7466 | 118-124 | UMLS/C1442450 | denotes | 1 hour |
| T7463 | 50-57 | UMLS/C2347026 | denotes | samples |
| T7455 | 168-172 | UMLS/C1136359 | denotes | ell |
| T7454 | 50-57 | UMLS/C0870078 | denotes | samples |
| T7451 | 135-140 | UMLS/C0231290 | denotes | fter |
| T7449 | 63-73 | UMLS/C0332255 | denotes | fragmented |
| T7442 | 168-172 | UMLS/C1948049 | denotes | ell |
| T7438 | 168-172 | UMLS/C0007634 | denotes | ell |
| T7436 | 16-25 | UMLS/C1552738 | denotes | described |
| T7432 | 92-103 | UMLS/C0162745 | denotes | collagenase |
| T7429 | 78-86 | UMLS/C0012237 | denotes | digested |
| T7428 | 50-57 | UMLS/C0370003 | denotes | samples |
| T7426 | 150-156 | UMLS/C0040300 | denotes | issue |
| T7422 | 135-140 | UMLS/C0687676 | denotes | fter |
| T7421 | 92-103 | UP/P08897 | denotes | collagenase |
| T7417 | 63-73 | UMLS/C1708096 | denotes | fragmented |
| T7412 | 92-103 | UP/P33437 | denotes | collagenase |
| T7391 | 168-172 | UMLS/C1704653 | denotes | ell |
| T7390 | 141-149 | UMLS/C0849355 | denotes | emoving |
| T7388 | 41-46 | UMLS/C0443224 | denotes | fresh |
| T7380 | 63-73 | UMLS/C0486805 | denotes | fragmented |
| T7373 | 168-172 | UMLS/C1269647 | denotes | ell |
| T7371 | 108-113 | UMLS/C0011519 | denotes | DNase |
| T7370 | 108-113 | UMLS/C0011522 | denotes | DNase |
| T7368 | 157-163 | UMLS/C0440266 | denotes | ebris, |
| T7363 | 63-73 | UMLS/C0332472 | denotes | fragmented |
| T7361 | 63-73 | UMLS/C0392767 | denotes | fragmented |
| T7354 | 78-86 | UMLS/C0868946 | denotes | digested |
| T7353 | 150-156 | UMLS/C1547928 | denotes | issue |
| T7346 | 50-57 | UMLS/C0441621 | denotes | samples |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7613 | 184-186 | IN | denotes | in |
| T7612 | 172-183 | NN | denotes | suspensions |
| T7611 | 167-171 | NN | denotes | cell |
| T7610 | 164-166 | JJ | denotes | ST |
| T7609 | 162-163 | -COMMA- | denotes | , |
| T7608 | 156-162 | NN | denotes | debris |
| T7607 | 149-155 | NN | denotes | tissue |
| T7606 | 140-148 | VB | denotes | removing |
| T7605 | 134-139 | IN | denotes | After |
| T7604 | 128-133 | NNP | denotes | 37°C. |
| T7603 | 125-127 | IN | denotes | at |
| T7602 | 120-124 | NN | denotes | hour |
| T7601 | 118-119 | CD | denotes | 1 |
| T7600 | 114-117 | IN | denotes | for |
| T7599 | 108-113 | NN | denotes | DNase |
| T7598 | 104-107 | CC | denotes | and |
| T7597 | 92-103 | NN | denotes | collagenase |
| T7596 | 87-91 | IN | denotes | with |
| T7595 | 78-86 | VB | denotes | digested |
| T7594 | 74-77 | CC | denotes | and |
| T7593 | 63-73 | VB | denotes | fragmented |
| T7592 | 58-62 | VB | denotes | were |
| T7591 | 50-57 | NN | denotes | samples |
| T7590 | 47-49 | NN | denotes | ST |
| T7589 | 41-46 | JJ | denotes | fresh |
| T7588 | 39-40 | -COMMA- | denotes | , |
| T7587 | 32-39 | RB | denotes | Briefly |
| T7586 | 29-30 | -RRB- | denotes | ] |
| T7585 | 27-29 | CD | denotes | 27 |
| T7584 | 26-27 | -LRB- | denotes | [ |
| T7583 | 16-25 | VB | denotes | described |
| T7582 | 5-15 | RB | denotes | previously |
| T7581 | 2-4 | IN | denotes | as |
| T7580 | 0-1 | -COMMA- | denotes | , |
| R3684 | T7583 | T7582 | arg1Of | described,previously |
| R3685 | T7585 | T7581 | arg2Of | 27,as |
| R3686 | T7585 | T7583 | arg1Of | 27,described |
| R3687 | T7585 | T7584 | arg2Of | 27,[ |
| R3688 | T7586 | T7584 | arg3Of | ],[ |
| R3689 | T7591 | T7589 | arg1Of | samples,fresh |
| R3690 | T7591 | T7590 | arg1Of | samples,ST |
| R3691 | T7591 | T7592 | arg1Of | samples,were |
| R3692 | T7591 | T7593 | arg2Of | samples,fragmented |
| R3693 | T7591 | T7595 | arg2Of | samples,digested |
| R3694 | T7591 | T7606 | arg1Of | samples,removing |
| R3695 | T7593 | T7594 | arg1Of | fragmented,and |
| R3696 | T7594 | T7587 | arg1Of | and,Briefly |
| R3697 | T7594 | T7588 | arg1Of | and,"," |
| R3698 | T7594 | T7592 | arg2Of | and,were |
| R3699 | T7594 | T7605 | arg1Of | and,After |
| R3700 | T7595 | T7594 | arg2Of | digested,and |
| R3701 | T7595 | T7596 | arg1Of | digested,with |
| R3702 | T7595 | T7600 | arg1Of | digested,for |
| R3703 | T7597 | T7598 | arg1Of | collagenase,and |
| R3704 | T7598 | T7596 | arg2Of | and,with |
| R3705 | T7599 | T7598 | arg2Of | DNase,and |
| R3706 | T7602 | T7600 | arg2Of | hour,for |
| R3707 | T7602 | T7601 | arg1Of | hour,1 |
| R3708 | T7602 | T7603 | arg1Of | hour,at |
| R3709 | T7604 | T7603 | arg2Of | 37°C.,at |
| R3710 | T7606 | T7605 | arg2Of | removing,After |
| R3711 | T7608 | T7606 | arg2Of | debris,removing |
| R3712 | T7608 | T7607 | arg1Of | debris,tissue |
| R3714 | T7612 | T7610 | arg1Of | suspensions,ST |
| R3715 | T7612 | T7611 | arg1Of | suspensions,cell |
| R3716 | T7612 | T7613 | arg1Of | suspensions,in |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7341 | 149-155 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T50 | 32-133 | Sentence | denotes | Briefly, fresh ST samples were fragmented and digested with collagenase and DNase for 1 hour at 37°C. |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7940 | 47-49 | Protein | denotes | ST |
| T7939 | 92-103 | Protein | denotes | collagenase |
| T7936 | 164-183 | Entity | denotes | ST cell suspensions |
| T7931 | 108-113 | Protein | denotes | DNase |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7818 | 184-186 | IN | denotes | in |
| T7817 | 172-183 | NNS | denotes | suspensions |
| T7816 | 167-171 | NN | denotes | cell |
| T7815 | 164-166 | NNP | denotes | ST |
| T7814 | 162-163 | , | denotes | , |
| T7813 | 156-162 | NN | denotes | debris |
| T7812 | 149-155 | NN | denotes | tissue |
| T7811 | 140-148 | VBG | denotes | removing |
| T7810 | 134-139 | IN | denotes | After |
| T7809 | 132-133 | . | denotes | . |
| T7808 | 131-132 | NNP | denotes | C |
| T7807 | 130-131 | CD | denotes | ° |
| T7806 | 128-130 | CD | denotes | 37 |
| T7805 | 125-127 | IN | denotes | at |
| T7804 | 120-124 | NN | denotes | hour |
| T7803 | 118-119 | CD | denotes | 1 |
| T7802 | 114-117 | IN | denotes | for |
| T7801 | 108-113 | NNP | denotes | DNase |
| T7800 | 104-107 | CC | denotes | and |
| T7799 | 92-103 | NN | denotes | collagenase |
| T7798 | 87-91 | IN | denotes | with |
| T7797 | 78-86 | VBN | denotes | digested |
| T7796 | 74-77 | CC | denotes | and |
| T7795 | 63-73 | VBN | denotes | fragmented |
| T7794 | 58-62 | VBD | denotes | were |
| T7793 | 50-57 | NNS | denotes | samples |
| T7792 | 47-49 | NNP | denotes | ST |
| T7791 | 41-46 | JJ | denotes | fresh |
| T7790 | 39-40 | , | denotes | , |
| T7789 | 32-39 | RB | denotes | Briefly |
| T7788 | 30-31 | . | denotes | . |
| T7787 | 29-30 | NNP | denotes | ] |
| T7786 | 27-29 | CD | denotes | 27 |
| T7785 | 26-27 | NNP | denotes | [ |
| T7784 | 16-25 | VBN | denotes | described |
| T7783 | 5-15 | RB | denotes | previously |
| T7782 | 2-4 | IN | denotes | as |
| T7781 | 0-1 | , | denotes | , |
| R3883 | T7782 | T7784 | mark | as,described |
| R3884 | T7783 | T7784 | advmod | previously,described |
| R3886 | T7785 | T7787 | nmod | [,] |
| R3887 | T7786 | T7787 | nummod | 27,] |
| R3888 | T7787 | T7784 | dobj | ],described |
| R3890 | T7789 | T7795 | advmod | Briefly,fragmented |
| R3891 | T7790 | T7795 | punct | ",",fragmented |
| R3892 | T7791 | T7793 | amod | fresh,samples |
| R3893 | T7792 | T7793 | compound | ST,samples |
| R3894 | T7793 | T7795 | nsubjpass | samples,fragmented |
| R3895 | T7794 | T7795 | auxpass | were,fragmented |
| R3896 | T7795 | T7795 | ROOT | fragmented,fragmented |
| R3897 | T7796 | T7795 | cc | and,fragmented |
| R3898 | T7797 | T7795 | conj | digested,fragmented |
| R3899 | T7798 | T7797 | prep | with,digested |
| R3900 | T7799 | T7798 | pobj | collagenase,with |
| R3901 | T7800 | T7799 | cc | and,collagenase |
| R3902 | T7801 | T7799 | conj | DNase,collagenase |
| R3903 | T7802 | T7797 | prep | for,digested |
| R3904 | T7803 | T7804 | nummod | 1,hour |
| R3905 | T7804 | T7802 | pobj | hour,for |
| R3906 | T7805 | T7797 | prep | at,digested |
| R3907 | T7806 | T7807 | nummod | 37,° |
| R3908 | T7807 | T7805 | pobj | °,at |
| R3909 | T7808 | T7805 | pobj | C,at |
| R3910 | T7809 | T7795 | punct | .,fragmented |
| R3911 | T7810 | T7817 | prep | After,suspensions |
| R3912 | T7811 | T7810 | pcomp | removing,After |
| R3913 | T7812 | T7813 | compound | tissue,debris |
| R3914 | T7813 | T7811 | dobj | debris,removing |
| R3915 | T7814 | T7817 | punct | ",",suspensions |
| R3916 | T7815 | T7817 | compound | ST,suspensions |
| R3917 | T7816 | T7817 | compound | cell,suspensions |
| R3919 | T7818 | T7817 | prep | in,suspensions |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7499 | 108-113 | Protein | denotes | DNase |
| T7498 | 92-103 | Protein | denotes | collagenase |