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PMC:1064873 / 842-967 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T422 16-23 OCCURRENCE denotes induced
T403 91-93 country_code denotes in
T251 103-104 CD denotes 4
T250 101-103 NNP denotes CD
T249 94-100 JJ denotes normal
T248 91-93 IN denotes in
T247 75-90 NN denotes phosphorylation
T246 73-74 CD denotes 3
T245 59-72 NN denotes transcription
T244 56-58 IN denotes of
T243 46-55 NN denotes activator
T242 42-45 CC denotes and
T241 31-41 NN denotes transducer
T240 24-30 NN denotes signal
T239 16-23 VBD denotes induced
T238 7-15 NNS denotes patients
T237 4-6 NNP denotes RA
T257 121-124 VBD denotes was
T256 115-120 WDT denotes which
T255 113-114 , denotes ,
T254 108-113 NNS denotes cells
T253 106-107 NN denotes T
T252 104-105 NN denotes +

biosemtest

Id Subject Object Predicate Lexical cue
T863 94-100 UMLS/C0205307 denotes normal
T829 7-15 UMLS/C1705908 denotes patients
T820 16-23 UMLS/C0205263 denotes induced
T800 94-100 UMLS/C2347086 denotes normal
T704 106-113 UMLS/C0039194 denotes T cells
T656 24-74 UP/Q19S50 denotes signal transducer and activator of transcription 3
T584 7-15 UMLS/C0030705 denotes patients
T564 7-15 UMLS/C1578479 denotes patients
T557 7-15 UMLS/C1578483 denotes patients
T553 7-15 UMLS/C1578480 denotes patients
T549 7-15 UMLS/C1578481 denotes patients
T544 7-15 UMLS/C1578486 denotes patients
T539 7-15 UMLS/C1578484 denotes patients
T534 7-15 UMLS/C1578485 denotes patients
T476 24-74 UP/P52631 denotes signal transducer and activator of transcription 3
T473 94-100 UMLS/C1550457 denotes normal
T471 24-74 UP/P42227 denotes signal transducer and activator of transcription 3
T464 24-74 UP/P40763 denotes signal transducer and activator of transcription 3
T457 75-90 UMLS/C0031715 denotes phosphorylation
T451 24-74 UP/Q6DV79 denotes signal transducer and activator of transcription 3
T448 94-100 UMLS/C1551394 denotes normal
T772 94-100 UMLS/C0439166 denotes normal
T754 24-74 UP/P61635 denotes signal transducer and activator of transcription 3
T751 7-15 UMLS/C1550655 denotes patients
T745 24-74 UMLS/C0253050 denotes signal transducer and activator of transcription 3
T735 94-100 UMLS/C1873497 denotes normal
T486 94-100 UMLS/C1704701 denotes normal

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1308 121-124 VB denotes was
T1307 115-120 WDT denotes which
T1306 113-114 -COMMA- denotes ,
T1305 108-113 NN denotes cells
T1304 106-107 NN denotes T
T1303 101-105 JJ denotes CD4+
T1302 94-100 JJ denotes normal
T1301 91-93 IN denotes in
T1300 75-90 NN denotes phosphorylation
T1299 73-74 CD denotes 3
T1298 59-72 NN denotes transcription
T1297 56-58 IN denotes of
T1296 46-55 NN denotes activator
T1295 42-45 CC denotes and
T1294 31-41 NN denotes transducer
T1293 24-30 NN denotes signal
T1292 16-23 VB denotes induced
T1291 7-15 NN denotes patients
T1290 4-6 NN denotes RA
R190 T1291 T1290 arg1Of patients,RA
R191 T1292 T1301 arg1Of induced,in
R192 T1294 T1295 arg1Of transducer,and
R193 T1296 T1295 arg2Of activator,and
R194 T1300 T1292 arg2Of phosphorylation,induced
R195 T1300 T1293 arg1Of phosphorylation,signal
R196 T1300 T1294 arg1Of phosphorylation,transducer
R197 T1300 T1296 arg1Of phosphorylation,activator
R198 T1300 T1297 arg1Of phosphorylation,of
R199 T1300 T1298 arg1Of phosphorylation,transcription
R200 T1300 T1299 arg1Of phosphorylation,3
R201 T1305 T1301 arg2Of cells,in
R202 T1305 T1302 arg1Of cells,normal
R203 T1305 T1303 arg1Of cells,CD4+
R204 T1305 T1304 arg1Of cells,T
R205 T1305 T1306 arg1Of cells,","
R206 T1305 T1307 arg1Of cells,which
R207 T1305 T1308 arg1Of cells,was

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T982 24-74 Protein denotes signal transducer and activator of transcription 3
T983 101-104 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1044 101-104 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-BP

Id Subject Object Predicate Lexical cue
T911 59-72 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T909 75-90 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T1018 108-113 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

simple1

Id Subject Object Predicate Lexical cue
T1137 24-74 Protein denotes signal transducer and activator of transcription 3
T1138 101-104 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1935 101-104 Protein denotes CD4
T1934 24-74 Protein denotes signal transducer and activator of transcription 3
T1959 75-90 Phosphorylation denotes phosphorylation
T1958 16-23 Positive_regulation denotes induced
R634 T1934 T1958 themeOf signal transducer and activator of transcription 3,induced
R635 T1934 T1959 themeOf signal transducer and activator of transcription 3,phosphorylation
R642 T1959 T1958 themeOf phosphorylation,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1455 16-23 Positive_regulation denotes induced
T1454 75-90 Phosphorylation denotes phosphorylation
T1431 101-104 Protein denotes CD4
T1430 24-74 Protein denotes signal transducer and activator of transcription 3
R323 T1430 T1455 themeOf signal transducer and activator of transcription 3,induced
R324 T1430 T1454 themeOf signal transducer and activator of transcription 3,phosphorylation
R329 T1454 T1455 themeOf phosphorylation,induced

DLUT931

Id Subject Object Predicate Lexical cue
T1501 16-23 Positive_regulation denotes induced
T1500 75-90 Phosphorylation denotes phosphorylation
T1476 101-104 Protein denotes CD4
T1475 24-74 Protein denotes signal transducer and activator of transcription 3
R338 T1475 T1500 themeOf signal transducer and activator of transcription 3,phosphorylation
R349 T1500 T1501 themeOf phosphorylation,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1892 4-6 Protein denotes RA
T1877 94-113 Entity denotes normal CD4+ T cells
T1876 24-74 Protein denotes signal transducer and activator of transcription 3
T1914 24-113 Phosphorylation denotes signal transducer and activator of transcription 3 phosphorylation in normal CD4+ T cells
R615 T1876 T1914 themeOf signal transducer and activator of transcription 3,signal transducer and activator of transcription 3 phosphorylation in normal CD4+ T cells

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1711 121-124 VBD denotes was
T1710 115-120 WDT denotes which
T1709 113-114 , denotes ,
T1708 108-113 NNS denotes cells
T1707 106-107 NNP denotes T
T1706 104-105 CD denotes +
T1705 101-104 NNP denotes CD4
T1704 94-100 JJ denotes normal
T1703 91-93 IN denotes in
T1702 75-90 NN denotes phosphorylation
T1701 73-74 CD denotes 3
T1700 59-72 NN denotes transcription
T1699 56-58 IN denotes of
T1698 46-55 NN denotes activator
T1697 42-45 CC denotes and
T1696 31-41 NN denotes transducer
T1695 24-30 NN denotes signal
T1694 16-23 VBD denotes induced
T1693 7-15 NNS denotes patients
T1692 4-6 NNP denotes RA
R465 T1692 T1693 compound RA,patients
R467 T1694 T1694 ROOT induced,induced
R468 T1695 T1696 compound signal,transducer
R469 T1696 T1694 dobj transducer,induced
R470 T1697 T1696 cc and,transducer
R471 T1698 T1696 conj activator,transducer
R472 T1699 T1698 prep of,activator
R473 T1700 T1699 pobj transcription,of
R474 T1701 T1702 nummod 3,phosphorylation
R475 T1702 T1696 appos phosphorylation,transducer
R476 T1703 T1702 prep in,phosphorylation
R477 T1704 T1708 amod normal,cells
R478 T1705 T1708 compound CD4,cells
R479 T1706 T1708 nummod +,cells
R480 T1707 T1708 compound T,cells
R481 T1708 T1703 pobj cells,in
R482 T1709 T1708 punct ",",cells

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1108 101-104 Protein denotes CD4

testone

Id Subject Object Predicate Lexical cue
T69 75-90 Phosphorylation denotes phosphorylation
T48 101-104 Protein denotes CD4
T47 24-74 Protein denotes signal transducer and activator of transcription 3
R7 T47 T69 themeOf signal transducer and activator of transcription 3,phosphorylation