PMC:1064873 / 8230-9280
Annnotations
LappsTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7328 | 980-984 | Protein | denotes | CD4+ |
| T7327 | 507-512 | Protein | denotes | DNase |
| T7326 | 491-502 | Protein | denotes | collagenase |
| T7325 | 357-361 | Protein | denotes | CD4+ |
| T7324 | 238-246 | Protein | denotes | anti-CD4 |
| T7323 | 173-177 | Protein | denotes | CD4+ |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 15535835-9182920-4156886 | 426-428 | 9182920 | denotes | 27 |
biosemtest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7466 | 517-523 | UMLS/C1442450 | denotes | 1 hour |
| T7465 | 343-355 | UMLS/C0039401 | denotes | instructions |
| T7464 | 663-675 | UMLS/C2348609 | denotes | upplemented |
| T7463 | 449-456 | UMLS/C2347026 | denotes | samples |
| T7462 | 392-399 | UMLS/C2347026 | denotes | samples |
| T7461 | 343-355 | UMLS/C1442085 | denotes | instructions |
| T7460 | 572-594 | UMLS/C1515100 | denotes | uspensions in culture |
| T7459 | 328-342 | UMLS/C1546933 | denotes | manufacturer's |
| T7458 | 939-942 | UMLS/C1552937 | denotes | n. |
| T7457 | 687-692 | UMLS/C0019215 | denotes | EPES |
| T7456 | 957-962 | UMLS/C1136359 | denotes | lls w |
| T7455 | 567-571 | UMLS/C1136359 | denotes | ell |
| T7454 | 449-456 | UMLS/C0870078 | denotes | samples |
| T7453 | 392-399 | UMLS/C0870078 | denotes | samples |
| T7452 | 751-761 | UMLS/C0030842 | denotes | enicillin, |
| T7451 | 534-539 | UMLS/C0231290 | denotes | fter |
| T7450 | 73-86 | UMLS/C0178913 | denotes | blood samples |
| T7449 | 462-472 | UMLS/C0332255 | denotes | fragmented |
| T7448 | 125-132 | UMLS/C0178587 | denotes | density |
| T7447 | 375-383 | UMLS/C1764827 | denotes | isolated |
| T7445 | 375-383 | UMLS/C1548221 | denotes | isolated |
| T7444 | 587-601 | UMLS/C0010454 | denotes | ulture medium |
| T7443 | 957-962 | UMLS/C1948049 | denotes | lls w |
| T7442 | 567-571 | UMLS/C1948049 | denotes | ell |
| T7441 | 613-619 | UMLS/C0439536 | denotes | edium; |
| T7440 | 251-257 | UMLS/C0453946 | denotes | coated |
| T7439 | 957-962 | UMLS/C0007634 | denotes | lls w |
| T7438 | 567-571 | UMLS/C0007634 | denotes | ell |
| T7437 | 939-942 | UMLS/C0439232 | denotes | n. |
| T7436 | 415-424 | UMLS/C1552738 | denotes | described |
| T7435 | 939-942 | UMLS/C0702093 | denotes | n. |
| T7434 | 343-355 | UMLS/C0220931 | denotes | instructions |
| T7433 | 343-355 | UMLS/C1292796 | denotes | instructions |
| T7432 | 491-502 | UMLS/C0162745 | denotes | collagenase |
| T7431 | 133-142 | UMLS/C0439182 | denotes | gradients |
| T7430 | 328-342 | UMLS/C1705426 | denotes | manufacturer's |
| T7429 | 477-485 | UMLS/C0012237 | denotes | digested |
| T7428 | 449-456 | UMLS/C0370003 | denotes | samples |
| T7427 | 392-399 | UMLS/C0370003 | denotes | samples |
| T7426 | 549-555 | UMLS/C0040300 | denotes | issue |
| T7425 | 251-257 | UMLS/C1704806 | denotes | coated |
| T7424 | 258-272 | UMLS/C1328924 | denotes | magnetic beads |
| T7423 | 90-104 | UMLS/C0007703 | denotes | centrifugation |
| T7422 | 534-539 | UMLS/C0687676 | denotes | fter |
| T7421 | 491-502 | UP/P08897 | denotes | collagenase |
| T7420 | 311-320 | UMLS/C0680240 | denotes | according |
| T7419 | 777-789 | UMLS/C0038425 | denotes | treptomycin; |
| T7418 | 251-257 | UMLS/C1697272 | denotes | coated |
| T7417 | 462-472 | UMLS/C1708096 | denotes | fragmented |
| T7416 | 896-902 | UMLS/C0005971 | denotes | ates ( |
| T7415 | 251-257 | UMLS/C1705944 | denotes | coated |
| T7414 | 751-761 | UMLS/C0220892 | denotes | enicillin, |
| T7413 | 47-55 | UMLS/C1521827 | denotes | prepared |
| T7412 | 491-502 | UP/P33437 | denotes | collagenase |
| T7411 | 968-977 | UMLS/C1512335 | denotes | rvested a |
| T7410 | 375-383 | UMLS/C1546680 | denotes | isolated |
| T7409 | 1000-1008 | UMLS/C1998793 | denotes | rified b |
| T7408 | 191-199 | UMLS/C1998793 | denotes | purified |
| T7407 | 328-342 | UMLS/C0947322 | denotes | manufacturer's |
| T7405 | 301-308 | UMLS/C0017480 | denotes | Germany |
| T7404 | 663-675 | UMLS/C1549514 | denotes | upplemented |
| T7403 | 205-209 | UMLS/C1321301 | denotes | PBMC |
| T7402 | 36-40 | UMLS/C1321301 | denotes | PBMC |
| T7401 | 0-34 | UMLS/C1321301 | denotes | Peripheral blood mononuclear cells |
| T7400 | 846-858 | UMLS/C0039421 | denotes | echnologies) |
| T7399 | 796-808 | UMLS/C0039421 | denotes | echnologies) |
| T7398 | 626-638 | UMLS/C0039421 | denotes | echnologies, |
| T7397 | 251-257 | UMLS/C1552080 | denotes | coated |
| T7396 | 613-619 | UMLS/C0009458 | denotes | edium; |
| T7395 | 841-845 | UMLS/C0376558 | denotes | ife |
| T7394 | 791-795 | UMLS/C0376558 | denotes | ife |
| T7393 | 621-625 | UMLS/C0376558 | denotes | ife |
| T7392 | 957-962 | UMLS/C1704653 | denotes | lls w |
| T7391 | 567-571 | UMLS/C1704653 | denotes | ell |
| T7390 | 540-548 | UMLS/C0849355 | denotes | emoving |
| T7389 | 715-739 | UMLS/C0311461 | denotes | onessential amino acids, |
| T7388 | 440-445 | UMLS/C0443224 | denotes | fresh |
| T7387 | 105-109 | UMLS/C0205136 | denotes | over |
| T7386 | 164-170 | UMLS/C0038995 | denotes | Sweden |
| T7385 | 328-342 | UMLS/C1548599 | denotes | manufacturer's |
| T7384 | 375-383 | UMLS/C0370215 | denotes | isolated |
| T7383 | 663-675 | UMLS/C1947943 | denotes | upplemented |
| T7382 | 927-930 | UMLS/C0041703 | denotes | A) |
| T7381 | 658-661 | UMLS/C0041703 | denotes | SA) |
| T7380 | 462-472 | UMLS/C0486805 | denotes | fragmented |
| T7378 | 73-86 | UMLS/C0005834 | denotes | blood samples |
| T7377 | 865-874 | UMLS/C1439852 | denotes | ncubated |
| T7374 | 957-962 | UMLS/C1269647 | denotes | lls w |
| T7373 | 567-571 | UMLS/C1269647 | denotes | ell |
| T7372 | 613-619 | UMLS/C1561547 | denotes | edium; |
| T7371 | 507-512 | UMLS/C0011519 | denotes | DNase |
| T7370 | 507-512 | UMLS/C0011522 | denotes | DNase |
| T7369 | 896-902 | UMLS/C0407295 | denotes | ates ( |
| T7368 | 556-562 | UMLS/C0440266 | denotes | ebris, |
| T7367 | 343-355 | UMLS/C0302828 | denotes | instructions |
| T7366 | 375-383 | UMLS/C0205409 | denotes | isolated |
| T7364 | 699-710 | UMLS/C0017797 | denotes | -glutamine, |
| T7363 | 462-472 | UMLS/C0332472 | denotes | fragmented |
| T7362 | 251-257 | UMLS/C1522408 | denotes | coated |
| T7361 | 462-472 | UMLS/C0392767 | denotes | fragmented |
| T7360 | 321-323 | UMLS/C0319022 | denotes | to |
| T7359 | 896-902 | UMLS/C1139930 | denotes | ates ( |
| T7358 | 663-675 | UMLS/C0242295 | denotes | upplemented |
| T7357 | 251-257 | UMLS/C0325028 | denotes | coated |
| T7356 | 133-142 | UMLS/C0812409 | denotes | gradients |
| T7354 | 477-485 | UMLS/C0868946 | denotes | digested |
| T7353 | 549-555 | UMLS/C1547928 | denotes | issue |
| T7352 | 1012-1030 | UMLS/C2347644 | denotes | sitive selection a |
| T7351 | 213-231 | UMLS/C2347644 | denotes | positive selection |
| T7350 | 987-994 | UMLS/C0039194 | denotes | cells w |
| T7349 | 362-369 | UMLS/C0039194 | denotes | T cells |
| T7348 | 178-185 | UMLS/C0039194 | denotes | T cells |
| T7346 | 449-456 | UMLS/C0441621 | denotes | samples |
| T7345 | 392-399 | UMLS/C0441621 | denotes | samples |
| T7344 | 251-257 | UMLS/C0999543 | denotes | coated |
| T7343 | 741-750 | UMLS/C2346524 | denotes | 00 IU/ml |
| T7342 | 613-619 | UMLS/C1705217 | denotes | edium; |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7701 | 1040-1049 | VB | denotes | described |
| T7700 | 1032-1039 | RB | denotes | already |
| T7699 | 1029-1031 | IN | denotes | as |
| T7698 | 1019-1028 | NN | denotes | selection |
| T7697 | 1010-1018 | JJ | denotes | positive |
| T7696 | 1007-1009 | IN | denotes | by |
| T7695 | 998-1006 | VB | denotes | purified |
| T7694 | 993-997 | VB | denotes | were |
| T7693 | 987-992 | NN | denotes | cells |
| T7692 | 985-986 | NN | denotes | T |
| T7691 | 980-984 | JJ | denotes | CD4+ |
| T7690 | 976-979 | CC | denotes | and |
| T7689 | 966-975 | VB | denotes | harvested |
| T7688 | 961-965 | VB | denotes | were |
| T7687 | 955-960 | NN | denotes | cells |
| T7686 | 942-954 | JJ | denotes | Non-adherent |
| T7685 | 937-940 | NN | denotes | min |
| T7684 | 934-936 | CD | denotes | 45 |
| T7683 | 930-933 | IN | denotes | for |
| T7682 | 928-929 | -RRB- | denotes | ) |
| T7681 | 925-928 | NNP | denotes | USA |
| T7680 | 923-924 | -COMMA- | denotes | , |
| T7679 | 921-923 | NNP | denotes | MA |
| T7678 | 919-920 | -COMMA- | denotes | , |
| T7677 | 910-919 | NNP | denotes | Cambridge |
| T7676 | 908-909 | -COMMA- | denotes | , |
| T7675 | 902-908 | NNP | denotes | Coster |
| T7674 | 901-902 | -LRB- | denotes | ( |
| T7673 | 894-900 | NN | denotes | plates |
| T7672 | 885-893 | JJ | denotes | six-well |
| T7671 | 882-884 | IN | denotes | in |
| T7670 | 877-881 | NN | denotes | 37°C |
| T7669 | 874-876 | IN | denotes | at |
| T7668 | 864-873 | VB | denotes | incubated |
| T7667 | 859-863 | VB | denotes | were |
| T7666 | 857-858 | -RRB- | denotes | ) |
| T7665 | 845-857 | NNP | denotes | Technologies |
| T7664 | 840-844 | NNP | denotes | Life |
| T7663 | 839-840 | -LRB- | denotes | ( |
| T7662 | 835-838 | NN | denotes | FCS |
| T7661 | 818-834 | JJ | denotes | heat-inactivated |
| T7660 | 816-817 | NN | denotes | % |
| T7659 | 814-816 | CD | denotes | 10 |
| T7658 | 809-813 | IN | denotes | with |
| T7657 | 807-808 | -RRB- | denotes | ) |
| T7656 | 795-807 | NNP | denotes | Technologies |
| T7655 | 790-794 | NNP | denotes | Life |
| T7654 | 788-789 | -COLON- | denotes | ; |
| T7653 | 776-788 | NN | denotes | streptomycin |
| T7652 | 770-775 | NN | denotes | mg/ml |
| T7651 | 766-769 | CD | denotes | 100 |
| T7650 | 762-765 | CC | denotes | and |
| T7649 | 760-761 | -COMMA- | denotes | , |
| T7648 | 750-760 | NN | denotes | penicillin |
| T7647 | 744-749 | NN | denotes | IU/ml |
| T7646 | 740-743 | CD | denotes | 100 |
| T7645 | 738-739 | -COMMA- | denotes | , |
| T7644 | 733-738 | NN | denotes | acids |
| T7643 | 727-732 | NN | denotes | amino |
| T7642 | 714-726 | JJ | denotes | nonessential |
| T7641 | 712-713 | NN | denotes | % |
| T7640 | 711-712 | CD | denotes | 2 |
| T7639 | 709-710 | -COMMA- | denotes | , |
| T7638 | 698-709 | NN | denotes | L-glutamine |
| T7637 | 695-697 | NN | denotes | mM |
| T7636 | 693-694 | CD | denotes | 2 |
| T7635 | 692-693 | -LRB- | denotes | ( |
| T7634 | 686-691 | NN | denotes | HEPES |
| T7633 | 683-685 | NN | denotes | mM |
| T7632 | 680-682 | CD | denotes | 25 |
| T7631 | 675-679 | IN | denotes | with |
| T7630 | 662-674 | VB | denotes | supplemented |
| T7629 | 660-661 | -RRB- | denotes | ) |
| T7628 | 657-660 | NNP | denotes | USA |
| T7627 | 655-656 | -COMMA- | denotes | , |
| T7626 | 653-655 | NNP | denotes | MD |
| T7625 | 651-652 | -COMMA- | denotes | , |
| T7554 | 247-257 | JJ | denotes | mAb-coated |
| T7553 | 238-246 | JJ | denotes | anti-CD4 |
| T7552 | 232-237 | VB | denotes | using |
| T7551 | 222-231 | NN | denotes | selection |
| T7550 | 213-221 | JJ | denotes | positive |
| T7549 | 210-212 | IN | denotes | by |
| T7548 | 205-209 | NN | denotes | PBMC |
| T7547 | 200-204 | IN | denotes | from |
| T7546 | 191-199 | VB | denotes | purified |
| T7545 | 186-190 | VB | denotes | were |
| T7544 | 180-185 | NN | denotes | cells |
| T7543 | 178-179 | NN | denotes | T |
| T7542 | 173-177 | JJ | denotes | CD4+ |
| T7541 | 170-171 | -RRB- | denotes | ) |
| T7540 | 164-170 | NNP | denotes | Sweden |
| T7539 | 162-163 | -COMMA- | denotes | , |
| T7538 | 155-162 | NNP | denotes | Uppsala |
| T7537 | 153-154 | -COMMA- | denotes | , |
| T7536 | 144-153 | NNP | denotes | Pharmacia |
| T7535 | 143-144 | -LRB- | denotes | ( |
| T7534 | 133-142 | NN | denotes | gradients |
| T7533 | 125-132 | NN | denotes | density |
| T7532 | 110-124 | JJ | denotes | Ficoll-Hypaque |
| T7531 | 105-109 | IN | denotes | over |
| T7530 | 90-104 | NN | denotes | centrifugation |
| T7529 | 87-89 | IN | denotes | by |
| T7528 | 79-86 | NN | denotes | samples |
| T7527 | 73-78 | NN | denotes | blood |
| T7526 | 61-72 | VB | denotes | heparinized |
| T7525 | 56-60 | IN | denotes | from |
| T7524 | 47-55 | VB | denotes | prepared |
| T7523 | 42-46 | VB | denotes | were |
| T7522 | 40-41 | -RRB- | denotes | ) |
| T7521 | 36-40 | NN | denotes | PBMC |
| T7520 | 35-36 | -LRB- | denotes | ( |
| T7519 | 29-34 | NN | denotes | cells |
| T7518 | 17-28 | JJ | denotes | mononuclear |
| T7517 | 11-16 | NN | denotes | blood |
| T7516 | 0-10 | JJ | denotes | Peripheral |
| T7624 | 639-651 | NNP | denotes | Gaithersburg |
| T7623 | 637-638 | -COMMA- | denotes | , |
| T7622 | 625-637 | NNP | denotes | Technologies |
| T7621 | 620-624 | NNP | denotes | Life |
| T7620 | 618-619 | -COLON- | denotes | ; |
| T7619 | 612-618 | NN | denotes | medium |
| T7618 | 607-611 | CD | denotes | 1640 |
| T7617 | 602-606 | NN | denotes | RPMI |
| T7616 | 601-602 | -LRB- | denotes | ( |
| T7615 | 594-600 | NN | denotes | medium |
| T7614 | 586-593 | NN | denotes | culture |
| T7613 | 583-585 | IN | denotes | in |
| T7612 | 571-582 | NN | denotes | suspensions |
| T7611 | 566-570 | NN | denotes | cell |
| T7610 | 563-565 | JJ | denotes | ST |
| T7609 | 561-562 | -COMMA- | denotes | , |
| T7608 | 555-561 | NN | denotes | debris |
| T7607 | 548-554 | NN | denotes | tissue |
| T7606 | 539-547 | VB | denotes | removing |
| T7605 | 533-538 | IN | denotes | After |
| T7604 | 527-532 | NNP | denotes | 37°C. |
| T7603 | 524-526 | IN | denotes | at |
| T7602 | 519-523 | NN | denotes | hour |
| T7601 | 517-518 | CD | denotes | 1 |
| T7600 | 513-516 | IN | denotes | for |
| T7599 | 507-512 | NN | denotes | DNase |
| T7598 | 503-506 | CC | denotes | and |
| T7597 | 491-502 | NN | denotes | collagenase |
| T7596 | 486-490 | IN | denotes | with |
| T7595 | 477-485 | VB | denotes | digested |
| T7594 | 473-476 | CC | denotes | and |
| T7593 | 462-472 | VB | denotes | fragmented |
| T7592 | 457-461 | VB | denotes | were |
| T7591 | 449-456 | NN | denotes | samples |
| T7590 | 446-448 | NN | denotes | ST |
| T7589 | 440-445 | JJ | denotes | fresh |
| T7588 | 438-439 | -COMMA- | denotes | , |
| T7587 | 431-438 | RB | denotes | Briefly |
| T7586 | 428-429 | -RRB- | denotes | ] |
| T7585 | 426-428 | CD | denotes | 27 |
| T7584 | 425-426 | -LRB- | denotes | [ |
| T7583 | 415-424 | VB | denotes | described |
| T7582 | 404-414 | RB | denotes | previously |
| T7581 | 401-403 | IN | denotes | as |
| T7580 | 399-400 | -COMMA- | denotes | , |
| T7579 | 392-399 | NN | denotes | samples |
| T7578 | 389-391 | NN | denotes | ST |
| T7577 | 384-388 | IN | denotes | from |
| T7576 | 375-383 | VB | denotes | isolated |
| T7575 | 370-374 | VB | denotes | were |
| T7574 | 364-369 | NN | denotes | cells |
| T7573 | 362-363 | NN | denotes | T |
| T7572 | 357-361 | JJ | denotes | CD4+ |
| T7571 | 343-355 | NN | denotes | instructions |
| T7570 | 340-342 | POS | denotes | 's |
| T7569 | 328-340 | NN | denotes | manufacturer |
| T7568 | 324-327 | DT | denotes | the |
| T7567 | 321-323 | TO | denotes | to |
| T7566 | 311-320 | VB | denotes | according |
| T7565 | 309-310 | -COMMA- | denotes | , |
| T7564 | 308-309 | -RRB- | denotes | ) |
| T7563 | 301-308 | NNP | denotes | Germany |
| T7562 | 299-300 | -COMMA- | denotes | , |
| T7561 | 291-299 | NNP | denotes | Gladbach |
| T7560 | 289-290 | -COMMA- | denotes | , |
| T7559 | 283-289 | NNP | denotes | Biotec |
| T7558 | 274-282 | NNP | denotes | Miltenyi |
| T7557 | 273-274 | -LRB- | denotes | ( |
| T7556 | 267-272 | NN | denotes | beads |
| T7555 | 258-266 | JJ | denotes | magnetic |
| R3618 | T7519 | T7516 | arg1Of | cells,Peripheral |
| R3619 | T7519 | T7517 | arg1Of | cells,blood |
| R3620 | T7519 | T7518 | arg1Of | cells,mononuclear |
| R3621 | T7519 | T7520 | arg1Of | cells,( |
| R3622 | T7519 | T7523 | arg1Of | cells,were |
| R3623 | T7519 | T7524 | arg2Of | cells,prepared |
| R3624 | T7521 | T7520 | arg2Of | PBMC,( |
| R3625 | T7522 | T7520 | arg3Of | ),( |
| R3626 | T7524 | T7523 | arg2Of | prepared,were |
| R3627 | T7524 | T7525 | arg1Of | prepared,from |
| R3628 | T7528 | T7525 | arg2Of | samples,from |
| R3629 | T7528 | T7526 | arg2Of | samples,heparinized |
| R3630 | T7528 | T7527 | arg1Of | samples,blood |
| R3631 | T7528 | T7529 | arg1Of | samples,by |
| R3632 | T7530 | T7529 | arg2Of | centrifugation,by |
| R3633 | T7530 | T7531 | arg1Of | centrifugation,over |
| R3634 | T7534 | T7531 | arg2Of | gradients,over |
| R3635 | T7534 | T7532 | arg1Of | gradients,Ficoll-Hypaque |
| R3636 | T7534 | T7533 | arg1Of | gradients,density |
| R3637 | T7534 | T7535 | arg1Of | gradients,( |
| R3638 | T7536 | T7537 | arg1Of | Pharmacia,"," |
| R3639 | T7537 | T7535 | arg2Of | ",",( |
| R3640 | T7537 | T7539 | arg1Of | ",","," |
| R3641 | T7538 | T7537 | arg2Of | Uppsala,"," |
| R3642 | T7540 | T7539 | arg2Of | Sweden,"," |
| R3643 | T7541 | T7535 | arg3Of | ),( |
| R3644 | T7544 | T7542 | arg1Of | cells,CD4+ |
| R3645 | T7544 | T7543 | arg1Of | cells,T |
| R3646 | T7544 | T7545 | arg1Of | cells,were |
| R3647 | T7544 | T7546 | arg2Of | cells,purified |
| R3648 | T7546 | T7545 | arg2Of | purified,were |
| R3649 | T7546 | T7547 | arg1Of | purified,from |
| R3650 | T7546 | T7565 | arg1Of | purified,"," |
| R3651 | T7546 | T7566 | arg1Of | purified,according |
| R3652 | T7548 | T7547 | arg2Of | PBMC,from |
| R3653 | T7551 | T7546 | arg1Of | selection,purified |
| R3654 | T7551 | T7549 | arg2Of | selection,by |
| R3655 | T7551 | T7550 | arg1Of | selection,positive |
| R3656 | T7551 | T7552 | arg1Of | selection,using |
| R3657 | T7555 | T7553 | arg1Of | magnetic,anti-CD4 |
| R3658 | T7555 | T7554 | arg1Of | magnetic,mAb-coated |
| R3659 | T7556 | T7552 | arg2Of | beads,using |
| R3660 | T7556 | T7555 | arg1Of | beads,magnetic |
| R3661 | T7556 | T7557 | arg1Of | beads,( |
| R3662 | T7559 | T7557 | arg2Of | Biotec,( |
| R3663 | T7559 | T7558 | arg1Of | Biotec,Miltenyi |
| R3664 | T7559 | T7560 | arg1Of | Biotec,"," |
| R3665 | T7561 | T7560 | arg2Of | Gladbach,"," |
| R3666 | T7561 | T7562 | arg1Of | Gladbach,"," |
| R3667 | T7563 | T7562 | arg2Of | Germany,"," |
| R3668 | T7564 | T7557 | arg3Of | ),( |
| R3669 | T7567 | T7566 | arg2Of | to,according |
| R3670 | T7569 | T7568 | arg1Of | manufacturer,the |
| R3671 | T7569 | T7570 | arg2Of | manufacturer,'s |
| R3672 | T7571 | T7567 | arg2Of | instructions,to |
| R3673 | T7571 | T7570 | arg1Of | instructions,'s |
| R3674 | T7574 | T7572 | arg1Of | cells,CD4+ |
| R3675 | T7574 | T7573 | arg1Of | cells,T |
| R3676 | T7574 | T7575 | arg1Of | cells,were |
| R3677 | T7574 | T7576 | arg2Of | cells,isolated |
| R3678 | T7576 | T7575 | arg2Of | isolated,were |
| R3679 | T7576 | T7577 | arg1Of | isolated,from |
| R3680 | T7579 | T7577 | arg2Of | samples,from |
| R3681 | T7579 | T7578 | arg1Of | samples,ST |
| R3682 | T7579 | T7580 | arg1Of | samples,"," |
| R3683 | T7579 | T7581 | arg1Of | samples,as |
| R3684 | T7583 | T7582 | arg1Of | described,previously |
| R3685 | T7585 | T7581 | arg2Of | 27,as |
| R3686 | T7585 | T7583 | arg1Of | 27,described |
| R3687 | T7585 | T7584 | arg2Of | 27,[ |
| R3688 | T7586 | T7584 | arg3Of | ],[ |
| R3689 | T7591 | T7589 | arg1Of | samples,fresh |
| R3690 | T7591 | T7590 | arg1Of | samples,ST |
| R3691 | T7591 | T7592 | arg1Of | samples,were |
| R3692 | T7591 | T7593 | arg2Of | samples,fragmented |
| R3693 | T7591 | T7595 | arg2Of | samples,digested |
| R3694 | T7591 | T7606 | arg1Of | samples,removing |
| R3695 | T7593 | T7594 | arg1Of | fragmented,and |
| R3696 | T7594 | T7587 | arg1Of | and,Briefly |
| R3697 | T7594 | T7588 | arg1Of | and,"," |
| R3698 | T7594 | T7592 | arg2Of | and,were |
| R3699 | T7594 | T7605 | arg1Of | and,After |
| R3700 | T7595 | T7594 | arg2Of | digested,and |
| R3701 | T7595 | T7596 | arg1Of | digested,with |
| R3702 | T7595 | T7600 | arg1Of | digested,for |
| R3703 | T7597 | T7598 | arg1Of | collagenase,and |
| R3704 | T7598 | T7596 | arg2Of | and,with |
| R3705 | T7599 | T7598 | arg2Of | DNase,and |
| R3706 | T7602 | T7600 | arg2Of | hour,for |
| R3707 | T7602 | T7601 | arg1Of | hour,1 |
| R3708 | T7602 | T7603 | arg1Of | hour,at |
| R3709 | T7604 | T7603 | arg2Of | 37°C.,at |
| R3710 | T7606 | T7605 | arg2Of | removing,After |
| R3711 | T7608 | T7606 | arg2Of | debris,removing |
| R3712 | T7608 | T7607 | arg1Of | debris,tissue |
| R3713 | T7608 | T7667 | modOf | debris,were |
| R3714 | T7612 | T7610 | arg1Of | suspensions,ST |
| R3715 | T7612 | T7611 | arg1Of | suspensions,cell |
| R3716 | T7612 | T7613 | arg1Of | suspensions,in |
| R3717 | T7612 | T7616 | arg1Of | suspensions,( |
| R3718 | T7612 | T7630 | arg2Of | suspensions,supplemented |
| R3719 | T7612 | T7658 | arg1Of | suspensions,with |
| R3720 | T7612 | T7667 | arg1Of | suspensions,were |
| R3721 | T7612 | T7668 | arg2Of | suspensions,incubated |
| R3722 | T7615 | T7613 | arg2Of | medium,in |
| R3723 | T7615 | T7614 | arg1Of | medium,culture |
| R3724 | T7619 | T7617 | arg1Of | medium,RPMI |
| R3725 | T7619 | T7618 | arg1Of | medium,1640 |
| R3726 | T7619 | T7620 | arg1Of | medium,; |
| R3727 | T7620 | T7616 | arg2Of | ;,( |
| R3728 | T7620 | T7623 | arg1Of | ;,"," |
| R3729 | T7620 | T7627 | arg1Of | ;,"," |
| R3730 | T7620 | T7628 | arg1Of | ;,USA |
| R3731 | T7622 | T7620 | arg2Of | Technologies,; |
| R3732 | T7622 | T7621 | arg1Of | Technologies,Life |
| R3733 | T7624 | T7623 | arg2Of | Gaithersburg,"," |
| R3734 | T7624 | T7625 | arg1Of | Gaithersburg,"," |
| R3735 | T7626 | T7625 | arg2Of | MD,"," |
| R3736 | T7629 | T7616 | arg3Of | ),( |
| R3737 | T7630 | T7631 | arg1Of | supplemented,with |
| R3738 | T7632 | T7633 | arg1Of | 25,mM |
| R3739 | T7634 | T7631 | arg2Of | HEPES,with |
| R3740 | T7634 | T7632 | arg1Of | HEPES,25 |
| R3741 | T7634 | T7635 | arg1Of | HEPES,( |
| R3742 | T7638 | T7636 | arg1Of | L-glutamine,2 |
| R3743 | T7638 | T7637 | arg1Of | L-glutamine,mM |
| R3744 | T7638 | T7639 | arg1Of | L-glutamine,"," |
| R3745 | T7639 | T7645 | arg1Of | ",","," |
| R3746 | T7640 | T7641 | arg1Of | 2,% |
| R3747 | T7644 | T7639 | arg2Of | acids,"," |
| R3748 | T7644 | T7640 | arg1Of | acids,2 |
| R3749 | T7644 | T7642 | arg1Of | acids,nonessential |
| R3750 | T7644 | T7643 | arg1Of | acids,amino |
| R3751 | T7645 | T7650 | arg1Of | ",",and |
| R3752 | T7648 | T7645 | arg2Of | penicillin,"," |
| R3753 | T7648 | T7646 | arg1Of | penicillin,100 |
| R3754 | T7648 | T7647 | arg1Of | penicillin,IU/ml |
| R3755 | T7650 | T7635 | arg2Of | and,( |
| R3756 | T7650 | T7649 | arg1Of | and,"," |
| R3757 | T7653 | T7651 | arg1Of | streptomycin,100 |
| R3758 | T7653 | T7652 | arg1Of | streptomycin,mg/ml |
| R3759 | T7653 | T7654 | arg1Of | streptomycin,; |
| R3760 | T7654 | T7650 | arg2Of | ;,and |
| R3761 | T7656 | T7654 | arg2Of | Technologies,; |
| R3762 | T7656 | T7655 | arg1Of | Technologies,Life |
| R3763 | T7657 | T7635 | arg3Of | ),( |
| R3764 | T7659 | T7660 | arg1Of | 10,% |
| R3765 | T7662 | T7658 | arg2Of | FCS,with |
| R3766 | T7662 | T7659 | arg1Of | FCS,10 |
| R3767 | T7662 | T7661 | arg1Of | FCS,heat-inactivated |
| R3768 | T7662 | T7663 | arg1Of | FCS,( |
| R3769 | T7665 | T7663 | arg2Of | Technologies,( |
| R3770 | T7665 | T7664 | arg1Of | Technologies,Life |
| R3771 | T7666 | T7663 | arg3Of | ),( |
| R3772 | T7668 | T7609 | arg1Of | incubated,"," |
| R3773 | T7668 | T7667 | arg2Of | incubated,were |
| R3774 | T7668 | T7669 | arg1Of | incubated,at |
| R3775 | T7670 | T7669 | arg2Of | 37°C,at |
| R3776 | T7670 | T7671 | arg1Of | 37°C,in |
| R3777 | T7673 | T7671 | arg2Of | plates,in |
| R3778 | T7673 | T7672 | arg1Of | plates,six-well |
| R3779 | T7673 | T7674 | arg1Of | plates,( |
| R3780 | T7673 | T7683 | arg1Of | plates,for |
| R3781 | T7675 | T7676 | arg1Of | Coster,"," |
| R3782 | T7676 | T7678 | arg1Of | ",","," |
| R3783 | T7677 | T7676 | arg2Of | Cambridge,"," |
| R3784 | T7678 | T7674 | arg2Of | ",",( |
| R3785 | T7678 | T7680 | arg1Of | ",","," |
| R3786 | T7678 | T7681 | arg1Of | ",",USA |
| R3787 | T7679 | T7678 | arg2Of | MA,"," |
| R3788 | T7682 | T7674 | arg3Of | ),( |
| R3789 | T7685 | T7683 | arg2Of | min,for |
| R3790 | T7685 | T7684 | arg1Of | min,45 |
| R3791 | T7687 | T7686 | arg1Of | cells,Non-adherent |
| R3792 | T7687 | T7688 | arg1Of | cells,were |
| R3793 | T7687 | T7689 | arg2Of | cells,harvested |
| R3794 | T7689 | T7688 | arg2Of | harvested,were |
| R3795 | T7689 | T7690 | arg1Of | harvested,and |
| R3796 | T7693 | T7691 | arg1Of | cells,CD4+ |
| R3797 | T7693 | T7692 | arg1Of | cells,T |
| R3798 | T7693 | T7694 | arg1Of | cells,were |
| R3799 | T7693 | T7695 | arg2Of | cells,purified |
| R3800 | T7695 | T7690 | arg2Of | purified,and |
| R3801 | T7695 | T7694 | arg2Of | purified,were |
| R3802 | T7698 | T7695 | arg1Of | selection,purified |
| R3803 | T7698 | T7696 | arg2Of | selection,by |
| R3804 | T7698 | T7697 | arg1Of | selection,positive |
| R3805 | T7698 | T7699 | arg1Of | selection,as |
| R3806 | T7701 | T7699 | arg2Of | described,as |
| R3807 | T7701 | T7700 | arg1Of | described,already |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7482 | 980-983 | Protein | denotes | CD4 |
| T7481 | 357-360 | Protein | denotes | CD4 |
| T7480 | 243-246 | Protein | denotes | CD4 |
| T7479 | 173-176 | Protein | denotes | CD4 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7493 | 980-983 | http://www.uniprot.org/uniprot/P01730 | denotes | CD4 |
| T7492 | 357-360 | http://www.uniprot.org/uniprot/P01730 | denotes | CD4 |
| T7491 | 243-246 | http://www.uniprot.org/uniprot/P01730 | denotes | CD4 |
| T7490 | 173-176 | http://www.uniprot.org/uniprot/P01730 | denotes | CD4 |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7341 | 548-554 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissue |
| T7340 | 73-78 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T7339 | 11-16 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7488 | 987-992 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T7487 | 955-960 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T7486 | 364-369 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T7485 | 180-185 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T7484 | 29-34 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7472 | 942-1050 | Sentence | denotes | Non-adherent cells were harvested and CD4+ T cells were purified by positive selection as already described. |
| T7471 | 431-941 | Sentence | denotes | Briefly, fresh ST samples were fragmented and digested with collagenase and DNase for 1 hour at 37°C. After removing tissue debris, ST cell suspensions in culture medium (RPMI 1640 medium; Life Technologies, Gaithersburg, MD, USA) supplemented with 25 mM HEPES (2 mM L-glutamine, 2% nonessential amino acids, 100 IU/ml penicillin, and 100 mg/ml streptomycin; Life Technologies) with 10% heat-inactivated FCS (Life Technologies) were incubated at 37°C in six-well plates (Coster, Cambridge, MA, USA) for 45 min. |
| T7470 | 357-430 | Sentence | denotes | CD4+ T cells were isolated from ST samples, as previously described [27]. |
| T7469 | 173-356 | Sentence | denotes | CD4+ T cells were purified from PBMC by positive selection using anti-CD4 mAb-coated magnetic beads (Miltenyi Biotec, Gladbach, Germany), according to the manufacturer's instructions. |
| T7468 | 0-172 | Sentence | denotes | Peripheral blood mononuclear cells (PBMC) were prepared from heparinized blood samples by centrifugation over Ficoll-Hypaque density gradients (Pharmacia, Uppsala, Sweden). |
| T47 | 0-172 | Sentence | denotes | Peripheral blood mononuclear cells (PBMC) were prepared from heparinized blood samples by centrifugation over Ficoll-Hypaque density gradients (Pharmacia, Uppsala, Sweden). |
| T48 | 173-356 | Sentence | denotes | CD4+ T cells were purified from PBMC by positive selection using anti-CD4 mAb-coated magnetic beads (Miltenyi Biotec, Gladbach, Germany), according to the manufacturer's instructions. |
| T49 | 357-430 | Sentence | denotes | CD4+ T cells were isolated from ST samples, as previously described [27]. |
| T50 | 431-532 | Sentence | denotes | Briefly, fresh ST samples were fragmented and digested with collagenase and DNase for 1 hour at 37°C. |
| T51 | 533-941 | Sentence | denotes | After removing tissue debris, ST cell suspensions in culture medium (RPMI 1640 medium; Life Technologies, Gaithersburg, MD, USA) supplemented with 25 mM HEPES (2 mM L-glutamine, 2% nonessential amino acids, 100 IU/ml penicillin, and 100 mg/ml streptomycin; Life Technologies) with 10% heat-inactivated FCS (Life Technologies) were incubated at 37°C in six-well plates (Coster, Cambridge, MA, USA) for 45 min. |
| T52 | 942-1050 | Sentence | denotes | Non-adherent cells were harvested and CD4+ T cells were purified by positive selection as already described. |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7510 | 980-983 | Protein | denotes | CD4 |
| T7509 | 357-360 | Protein | denotes | CD4 |
| T7508 | 243-246 | Protein | denotes | CD4 |
| T7507 | 173-176 | Protein | denotes | CD4 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7953 | 980-983 | Protein | denotes | CD4 |
| T7952 | 357-360 | Protein | denotes | CD4 |
| T7951 | 243-246 | Protein | denotes | CD4 |
| T7950 | 173-176 | Protein | denotes | CD4 |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7706 | 980-983 | Protein | denotes | CD4 |
| T7705 | 357-360 | Protein | denotes | CD4 |
| T7704 | 243-246 | Protein | denotes | CD4 |
| T7703 | 173-176 | Protein | denotes | CD4 |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7916 | 980-983 | Protein | denotes | CD4 |
| T7915 | 357-360 | Protein | denotes | CD4 |
| T7914 | 243-246 | Protein | denotes | CD4 |
| T7913 | 173-176 | Protein | denotes | CD4 |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7948 | 942-975 | Binding | denotes | Non-adherent cells were harvested |
| T7947 | 0-41 | Entity | denotes | Peripheral blood mononuclear cells (PBMC) |
| T7946 | 727-739 | Entity | denotes | amino acids, |
| T7945 | 942-960 | Entity | denotes | Non-adherent cells |
| T7944 | 357-369 | Entity | denotes | CD4+ T cells |
| T7943 | 680-710 | Entity | denotes | 25 mM HEPES (2 mM L-glutamine, |
| T7941 | 274-289 | Protein | denotes | Miltenyi Biotec |
| T7940 | 446-448 | Protein | denotes | ST |
| T7939 | 491-502 | Protein | denotes | collagenase |
| T7938 | 693-709 | Entity | denotes | 2 mM L-glutamine |
| T7937 | 980-992 | Entity | denotes | CD4+ T cells |
| T7936 | 563-582 | Entity | denotes | ST cell suspensions |
| T7935 | 750-761 | Entity | denotes | penicillin, |
| T7934 | 173-185 | Entity | denotes | CD4+ T cells |
| T7933 | 36-40 | Entity | denotes | PBMC |
| T7932 | 389-391 | Protein | denotes | ST |
| T7931 | 507-512 | Protein | denotes | DNase |
| T7930 | 770-788 | Entity | denotes | mg/ml streptomycin |
| T7929 | 205-231 | Entity | denotes | PBMC by positive selection |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7911 | 1049-1050 | . | denotes | . |
| T7910 | 1040-1049 | VBN | denotes | described |
| T7909 | 1032-1039 | RB | denotes | already |
| T7908 | 1029-1031 | IN | denotes | as |
| T7907 | 1019-1028 | NN | denotes | selection |
| T7906 | 1010-1018 | JJ | denotes | positive |
| T7905 | 1007-1009 | IN | denotes | by |
| T7904 | 998-1006 | VBN | denotes | purified |
| T7903 | 993-997 | VBD | denotes | were |
| T7902 | 987-992 | NNS | denotes | cells |
| T7901 | 985-986 | NNP | denotes | T |
| T7900 | 983-984 | CD | denotes | + |
| T7899 | 980-983 | NNP | denotes | CD4 |
| T7898 | 976-979 | CC | denotes | and |
| T7897 | 966-975 | VBN | denotes | harvested |
| T7896 | 961-965 | VBD | denotes | were |
| T7895 | 955-960 | NNS | denotes | cells |
| T7894 | 942-954 | JJ | denotes | Non-adherent |
| T7893 | 940-941 | . | denotes | . |
| T7892 | 937-940 | NN | denotes | min |
| T7891 | 934-936 | CD | denotes | 45 |
| T7890 | 930-933 | IN | denotes | for |
| T7889 | 928-929 | -RRB- | denotes | ) |
| T7888 | 925-928 | NNP | denotes | USA |
| T7887 | 923-924 | , | denotes | , |
| T7886 | 921-923 | NNP | denotes | MA |
| T7885 | 919-920 | , | denotes | , |
| T7884 | 910-919 | NNP | denotes | Cambridge |
| T7883 | 908-909 | , | denotes | , |
| T7882 | 902-908 | NNP | denotes | Coster |
| T7881 | 901-902 | -LRB- | denotes | ( |
| T7880 | 894-900 | NNS | denotes | plates |
| T7879 | 885-893 | JJ | denotes | six-well |
| T7878 | 882-884 | IN | denotes | in |
| T7877 | 880-881 | NNP | denotes | C |
| T7876 | 879-880 | CD | denotes | ° |
| T7875 | 877-879 | CD | denotes | 37 |
| T7874 | 874-876 | IN | denotes | at |
| T7873 | 864-873 | VBN | denotes | incubated |
| T7872 | 859-863 | VBD | denotes | were |
| T7871 | 857-858 | -RRB- | denotes | ) |
| T7870 | 845-857 | NNPS | denotes | Technologies |
| T7869 | 840-844 | NNP | denotes | Life |
| T7868 | 839-840 | -LRB- | denotes | ( |
| T7867 | 835-838 | NNP | denotes | FCS |
| T7866 | 818-834 | JJ | denotes | heat-inactivated |
| T7865 | 816-817 | NN | denotes | % |
| T7864 | 814-816 | CD | denotes | 10 |
| T7863 | 809-813 | IN | denotes | with |
| T7862 | 807-808 | -RRB- | denotes | ) |
| T7861 | 795-807 | NNPS | denotes | Technologies |
| T7860 | 790-794 | NNP | denotes | Life |
| T7859 | 788-789 | : | denotes | ; |
| T7858 | 776-788 | NN | denotes | streptomycin |
| T7857 | 770-775 | JJ | denotes | mg/ml |
| T7856 | 766-769 | CD | denotes | 100 |
| T7855 | 762-765 | CC | denotes | and |
| T7854 | 760-761 | , | denotes | , |
| T7853 | 750-760 | NN | denotes | penicillin |
| T7852 | 744-749 | NNP | denotes | IU/ml |
| T7851 | 740-743 | CD | denotes | 100 |
| T7850 | 738-739 | , | denotes | , |
| T7849 | 733-738 | NNS | denotes | acids |
| T7848 | 727-732 | JJ | denotes | amino |
| T7847 | 714-726 | JJ | denotes | nonessential |
| T7846 | 712-713 | NN | denotes | % |
| T7845 | 711-712 | CD | denotes | 2 |
| T7840 | 692-693 | -LRB- | denotes | ( |
| T7839 | 686-691 | NNP | denotes | HEPES |
| T7838 | 683-685 | NNP | denotes | mM |
| T7837 | 680-682 | CD | denotes | 25 |
| T7836 | 675-679 | IN | denotes | with |
| T7835 | 662-674 | VBN | denotes | supplemented |
| T7834 | 660-661 | -RRB- | denotes | ) |
| T7833 | 657-660 | NNP | denotes | USA |
| T7832 | 655-656 | , | denotes | , |
| T7831 | 653-655 | NNP | denotes | MD |
| T7830 | 651-652 | , | denotes | , |
| T7829 | 639-651 | NNP | denotes | Gaithersburg |
| T7828 | 637-638 | , | denotes | , |
| T7827 | 625-637 | NNPS | denotes | Technologies |
| T7826 | 620-624 | NNP | denotes | Life |
| T7825 | 618-619 | : | denotes | ; |
| T7824 | 612-618 | NN | denotes | medium |
| T7823 | 607-611 | CD | denotes | 1640 |
| T7822 | 602-606 | NNP | denotes | RPMI |
| T7821 | 601-602 | -LRB- | denotes | ( |
| T7820 | 594-600 | NN | denotes | medium |
| T7819 | 586-593 | NN | denotes | culture |
| T7818 | 583-585 | IN | denotes | in |
| T7817 | 571-582 | NNS | denotes | suspensions |
| T7816 | 566-570 | NN | denotes | cell |
| T7815 | 563-565 | NNP | denotes | ST |
| T7814 | 561-562 | , | denotes | , |
| T7813 | 555-561 | NN | denotes | debris |
| T7812 | 548-554 | NN | denotes | tissue |
| T7811 | 539-547 | VBG | denotes | removing |
| T7810 | 533-538 | IN | denotes | After |
| T7809 | 531-532 | . | denotes | . |
| T7808 | 530-531 | NNP | denotes | C |
| T7807 | 529-530 | CD | denotes | ° |
| T7806 | 527-529 | CD | denotes | 37 |
| T7805 | 524-526 | IN | denotes | at |
| T7804 | 519-523 | NN | denotes | hour |
| T7803 | 517-518 | CD | denotes | 1 |
| T7802 | 513-516 | IN | denotes | for |
| T7801 | 507-512 | NNP | denotes | DNase |
| T7800 | 503-506 | CC | denotes | and |
| T7799 | 491-502 | NN | denotes | collagenase |
| T7798 | 486-490 | IN | denotes | with |
| T7797 | 477-485 | VBN | denotes | digested |
| T7796 | 473-476 | CC | denotes | and |
| T7795 | 462-472 | VBN | denotes | fragmented |
| T7794 | 457-461 | VBD | denotes | were |
| T7793 | 449-456 | NNS | denotes | samples |
| T7792 | 446-448 | NNP | denotes | ST |
| T7791 | 440-445 | JJ | denotes | fresh |
| T7790 | 438-439 | , | denotes | , |
| T7789 | 431-438 | RB | denotes | Briefly |
| T7788 | 429-430 | . | denotes | . |
| T7787 | 428-429 | NNP | denotes | ] |
| T7786 | 426-428 | CD | denotes | 27 |
| T7785 | 425-426 | NNP | denotes | [ |
| T7784 | 415-424 | VBN | denotes | described |
| T7783 | 404-414 | RB | denotes | previously |
| T7782 | 401-403 | IN | denotes | as |
| T7781 | 399-400 | , | denotes | , |
| T7780 | 392-399 | NNS | denotes | samples |
| T7779 | 389-391 | NNP | denotes | ST |
| T7778 | 384-388 | IN | denotes | from |
| T7777 | 375-383 | VBN | denotes | isolated |
| T7776 | 370-374 | VBD | denotes | were |
| T7775 | 364-369 | NNS | denotes | cells |
| T7774 | 362-363 | NNP | denotes | T |
| T7773 | 360-361 | CD | denotes | + |
| T7772 | 357-360 | CD | denotes | CD4 |
| T7771 | 355-356 | . | denotes | . |
| T7770 | 343-355 | NNS | denotes | instructions |
| T7769 | 340-342 | POS | denotes | 's |
| T7768 | 328-340 | NN | denotes | manufacturer |
| T7767 | 324-327 | DT | denotes | the |
| T7766 | 321-323 | TO | denotes | to |
| T7765 | 311-320 | VBG | denotes | according |
| T7764 | 309-310 | , | denotes | , |
| T7763 | 308-309 | -RRB- | denotes | ) |
| T7762 | 301-308 | NNP | denotes | Germany |
| T7761 | 299-300 | , | denotes | , |
| T7760 | 291-299 | NNP | denotes | Gladbach |
| T7759 | 289-290 | , | denotes | , |
| T7758 | 283-289 | NNP | denotes | Biotec |
| T7757 | 274-282 | NNP | denotes | Miltenyi |
| T7756 | 273-274 | -LRB- | denotes | ( |
| T7755 | 267-272 | NNS | denotes | beads |
| T7754 | 258-266 | JJ | denotes | magnetic |
| T7753 | 247-257 | JJ | denotes | mAb-coated |
| T7752 | 238-246 | JJ | denotes | anti-CD4 |
| T7751 | 232-237 | VBG | denotes | using |
| T7750 | 222-231 | NN | denotes | selection |
| T7749 | 213-221 | JJ | denotes | positive |
| T7748 | 210-212 | IN | denotes | by |
| T7747 | 205-209 | NNP | denotes | PBMC |
| T7746 | 200-204 | IN | denotes | from |
| T7745 | 191-199 | VBN | denotes | purified |
| T7744 | 186-190 | VBD | denotes | were |
| T7743 | 180-185 | NNS | denotes | cells |
| T7742 | 178-179 | NNP | denotes | T |
| T7741 | 176-177 | CD | denotes | + |
| T7740 | 173-176 | CD | denotes | CD4 |
| T7739 | 171-172 | . | denotes | . |
| T7738 | 170-171 | -RRB- | denotes | ) |
| T7737 | 164-170 | NNP | denotes | Sweden |
| T7736 | 162-163 | , | denotes | , |
| T7735 | 155-162 | NNP | denotes | Uppsala |
| T7734 | 153-154 | , | denotes | , |
| T7733 | 144-153 | NNP | denotes | Pharmacia |
| T7732 | 143-144 | -LRB- | denotes | ( |
| T7731 | 133-142 | NNS | denotes | gradients |
| T7730 | 125-132 | NN | denotes | density |
| T7729 | 110-124 | JJ | denotes | Ficoll-Hypaque |
| T7728 | 105-109 | IN | denotes | over |
| T7727 | 90-104 | NN | denotes | centrifugation |
| T7726 | 87-89 | IN | denotes | by |
| T7725 | 79-86 | NNS | denotes | samples |
| T7724 | 73-78 | NN | denotes | blood |
| T7723 | 61-72 | VBN | denotes | heparinized |
| T7722 | 56-60 | IN | denotes | from |
| T7721 | 47-55 | VBN | denotes | prepared |
| T7720 | 42-46 | VBD | denotes | were |
| T7719 | 40-41 | -RRB- | denotes | ) |
| T7718 | 36-40 | NNP | denotes | PBMC |
| T7717 | 35-36 | -LRB- | denotes | ( |
| T7716 | 29-34 | NNS | denotes | cells |
| T7715 | 17-28 | NN | denotes | mononuclear |
| T7714 | 11-16 | NN | denotes | blood |
| T7713 | 0-10 | JJ | denotes | Peripheral |
| T7844 | 709-710 | , | denotes | , |
| T7843 | 698-709 | NNP | denotes | L-glutamine |
| T7842 | 695-697 | NNP | denotes | mM |
| T7841 | 693-694 | CD | denotes | 2 |
| R3814 | T7713 | T7716 | amod | Peripheral,cells |
| R3815 | T7714 | T7716 | compound | blood,cells |
| R3816 | T7715 | T7716 | compound | mononuclear,cells |
| R3818 | T7717 | T7718 | punct | (,PBMC |
| R3819 | T7718 | T7716 | appos | PBMC,cells |
| R3820 | T7719 | T7716 | punct | ),cells |
| R3821 | T7720 | T7721 | auxpass | were,prepared |
| R3822 | T7721 | T7721 | ROOT | prepared,prepared |
| R3823 | T7722 | T7721 | prep | from,prepared |
| R3824 | T7723 | T7725 | amod | heparinized,samples |
| R3825 | T7724 | T7725 | compound | blood,samples |
| R3826 | T7725 | T7722 | pobj | samples,from |
| R3827 | T7726 | T7721 | agent | by,prepared |
| R3828 | T7727 | T7726 | pobj | centrifugation,by |
| R3829 | T7728 | T7727 | prep | over,centrifugation |
| R3830 | T7729 | T7730 | amod | Ficoll-Hypaque,density |
| R3831 | T7730 | T7731 | compound | density,gradients |
| R3832 | T7731 | T7728 | pobj | gradients,over |
| R3833 | T7732 | T7738 | punct | (,) |
| R3834 | T7733 | T7738 | nmod | Pharmacia,) |
| R3835 | T7734 | T7733 | punct | ",",Pharmacia |
| R3836 | T7735 | T7733 | conj | Uppsala,Pharmacia |
| R3837 | T7736 | T7735 | punct | ",",Uppsala |
| R3838 | T7737 | T7735 | conj | Sweden,Uppsala |
| R3839 | T7738 | T7727 | punct | ),centrifugation |
| R3840 | T7739 | T7721 | punct | .,prepared |
| R3841 | T7740 | T7743 | nummod | CD4,cells |
| R3842 | T7741 | T7743 | nummod | +,cells |
| R3843 | T7742 | T7743 | compound | T,cells |
| R3844 | T7743 | T7745 | nsubjpass | cells,purified |
| R3845 | T7744 | T7745 | auxpass | were,purified |
| R3846 | T7745 | T7745 | ROOT | purified,purified |
| R3847 | T7746 | T7745 | prep | from,purified |
| R3848 | T7747 | T7746 | pobj | PBMC,from |
| R3849 | T7748 | T7745 | agent | by,purified |
| R3850 | T7749 | T7750 | amod | positive,selection |
| R3851 | T7750 | T7748 | pobj | selection,by |
| R3852 | T7751 | T7745 | advcl | using,purified |
| R3853 | T7752 | T7755 | amod | anti-CD4,beads |
| R3854 | T7753 | T7755 | amod | mAb-coated,beads |
| R3855 | T7754 | T7755 | amod | magnetic,beads |
| R3856 | T7755 | T7751 | dobj | beads,using |
| R3857 | T7756 | T7755 | punct | (,beads |
| R3858 | T7757 | T7758 | compound | Miltenyi,Biotec |
| R3859 | T7758 | T7755 | appos | Biotec,beads |
| R3860 | T7759 | T7758 | punct | ",",Biotec |
| R3861 | T7760 | T7758 | conj | Gladbach,Biotec |
| R3862 | T7761 | T7760 | punct | ",",Gladbach |
| R3863 | T7762 | T7760 | conj | Germany,Gladbach |
| R3864 | T7763 | T7755 | punct | ),beads |
| R3865 | T7764 | T7745 | punct | ",",purified |
| R3866 | T7765 | T7745 | prep | according,purified |
| R3867 | T7766 | T7765 | prep | to,according |
| R3868 | T7767 | T7768 | det | the,manufacturer |
| R3869 | T7768 | T7770 | poss | manufacturer,instructions |
| R3870 | T7769 | T7768 | case | 's,manufacturer |
| R3871 | T7770 | T7766 | pobj | instructions,to |
| R3872 | T7771 | T7745 | punct | .,purified |
| R3873 | T7772 | T7775 | nummod | CD4,cells |
| R3874 | T7773 | T7775 | nummod | +,cells |
| R3875 | T7774 | T7775 | compound | T,cells |
| R3876 | T7775 | T7777 | nsubjpass | cells,isolated |
| R3877 | T7776 | T7777 | auxpass | were,isolated |
| R3878 | T7777 | T7777 | ROOT | isolated,isolated |
| R3879 | T7778 | T7777 | prep | from,isolated |
| R3880 | T7779 | T7780 | compound | ST,samples |
| R3881 | T7780 | T7778 | pobj | samples,from |
| R3882 | T7781 | T7777 | punct | ",",isolated |
| R3883 | T7782 | T7784 | mark | as,described |
| R3884 | T7783 | T7784 | advmod | previously,described |
| R3885 | T7784 | T7777 | advcl | described,isolated |
| R3886 | T7785 | T7787 | nmod | [,] |
| R3887 | T7786 | T7787 | nummod | 27,] |
| R3888 | T7787 | T7784 | dobj | ],described |
| R3889 | T7788 | T7777 | punct | .,isolated |
| R3890 | T7789 | T7795 | advmod | Briefly,fragmented |
| R3891 | T7790 | T7795 | punct | ",",fragmented |
| R3892 | T7791 | T7793 | amod | fresh,samples |
| R3893 | T7792 | T7793 | compound | ST,samples |
| R3894 | T7793 | T7795 | nsubjpass | samples,fragmented |
| R3895 | T7794 | T7795 | auxpass | were,fragmented |
| R3896 | T7795 | T7795 | ROOT | fragmented,fragmented |
| R3897 | T7796 | T7795 | cc | and,fragmented |
| R3898 | T7797 | T7795 | conj | digested,fragmented |
| R3899 | T7798 | T7797 | prep | with,digested |
| R3900 | T7799 | T7798 | pobj | collagenase,with |
| R3901 | T7800 | T7799 | cc | and,collagenase |
| R3902 | T7801 | T7799 | conj | DNase,collagenase |
| R3903 | T7802 | T7797 | prep | for,digested |
| R3904 | T7803 | T7804 | nummod | 1,hour |
| R3905 | T7804 | T7802 | pobj | hour,for |
| R3906 | T7805 | T7797 | prep | at,digested |
| R3907 | T7806 | T7807 | nummod | 37,° |
| R3908 | T7807 | T7805 | pobj | °,at |
| R3909 | T7808 | T7805 | pobj | C,at |
| R3910 | T7809 | T7795 | punct | .,fragmented |
| R3911 | T7810 | T7817 | prep | After,suspensions |
| R3912 | T7811 | T7810 | pcomp | removing,After |
| R3913 | T7812 | T7813 | compound | tissue,debris |
| R3914 | T7813 | T7811 | dobj | debris,removing |
| R3915 | T7814 | T7817 | punct | ",",suspensions |
| R3916 | T7815 | T7817 | compound | ST,suspensions |
| R3917 | T7816 | T7817 | compound | cell,suspensions |
| R3918 | T7817 | T7835 | ccomp | suspensions,supplemented |
| R3919 | T7818 | T7817 | prep | in,suspensions |
| R3920 | T7819 | T7820 | compound | culture,medium |
| R3921 | T7820 | T7818 | pobj | medium,in |
| R3922 | T7821 | T7824 | punct | (,medium |
| R3923 | T7822 | T7824 | nmod | RPMI,medium |
| R3924 | T7823 | T7822 | nummod | 1640,RPMI |
| R3925 | T7824 | T7817 | appos | medium,suspensions |
| R3926 | T7825 | T7835 | punct | ;,supplemented |
| R3927 | T7826 | T7827 | compound | Life,Technologies |
| R3928 | T7827 | T7835 | nsubj | Technologies,supplemented |
| R3929 | T7828 | T7827 | punct | ",",Technologies |
| R3930 | T7829 | T7827 | conj | Gaithersburg,Technologies |
| R3931 | T7830 | T7829 | punct | ",",Gaithersburg |
| R3932 | T7831 | T7829 | conj | MD,Gaithersburg |
| R3933 | T7832 | T7831 | punct | ",",MD |
| R3934 | T7833 | T7831 | conj | USA,MD |
| R3935 | T7834 | T7827 | punct | ),Technologies |
| R3936 | T7835 | T7835 | ROOT | supplemented,supplemented |
| R3937 | T7836 | T7835 | prep | with,supplemented |
| R3938 | T7837 | T7839 | nummod | 25,HEPES |
| R3939 | T7838 | T7839 | compound | mM,HEPES |
| R3940 | T7839 | T7849 | nmod | HEPES,acids |
| R3941 | T7840 | T7843 | punct | (,L-glutamine |
| R3942 | T7841 | T7843 | nummod | 2,L-glutamine |
| R3943 | T7842 | T7843 | compound | mM,L-glutamine |
| R3944 | T7843 | T7839 | appos | L-glutamine,HEPES |
| R3945 | T7844 | T7843 | punct | ",",L-glutamine |
| R3946 | T7845 | T7846 | nummod | 2,% |
| R3947 | T7846 | T7849 | nmod | %,acids |
| R3948 | T7847 | T7849 | amod | nonessential,acids |
| R3949 | T7848 | T7849 | amod | amino,acids |
| R3950 | T7849 | T7836 | pobj | acids,with |
| R3951 | T7850 | T7849 | punct | ",",acids |
| R3952 | T7851 | T7853 | nummod | 100,penicillin |
| R3953 | T7852 | T7853 | compound | IU/ml,penicillin |
| R3954 | T7853 | T7849 | conj | penicillin,acids |
| R3955 | T7854 | T7853 | punct | ",",penicillin |
| R3956 | T7855 | T7853 | cc | and,penicillin |
| R3957 | T7856 | T7858 | nummod | 100,streptomycin |
| R3958 | T7857 | T7858 | amod | mg/ml,streptomycin |
| R3959 | T7858 | T7853 | conj | streptomycin,penicillin |
| R3960 | T7859 | T7861 | punct | ;,Technologies |
| R3961 | T7860 | T7861 | compound | Life,Technologies |
| R3962 | T7861 | T7835 | npadvmod | Technologies,supplemented |
| R3963 | T7862 | T7861 | punct | ),Technologies |
| R3964 | T7863 | T7861 | prep | with,Technologies |
| R3965 | T7864 | T7865 | nummod | 10,% |
| R3966 | T7865 | T7863 | pobj | %,with |
| R3967 | T7866 | T7867 | amod | heat-inactivated,FCS |
| R3968 | T7867 | T7873 | nsubjpass | FCS,incubated |
| R3969 | T7868 | T7870 | punct | (,Technologies |
| R3970 | T7869 | T7870 | compound | Life,Technologies |
| R3971 | T7870 | T7867 | appos | Technologies,FCS |
| R3972 | T7871 | T7870 | punct | ),Technologies |
| R3973 | T7872 | T7873 | auxpass | were,incubated |
| R3974 | T7873 | T7873 | ROOT | incubated,incubated |
| R3975 | T7874 | T7873 | prep | at,incubated |
| R3976 | T7875 | T7876 | nummod | 37,° |
| R3977 | T7876 | T7877 | nummod | °,C |
| R3978 | T7877 | T7874 | pobj | C,at |
| R3979 | T7878 | T7877 | prep | in,C |
| R3980 | T7879 | T7880 | amod | six-well,plates |
| R3981 | T7880 | T7878 | pobj | plates,in |
| R3982 | T7881 | T7877 | punct | (,C |
| R3983 | T7882 | T7877 | appos | Coster,C |
| R3984 | T7883 | T7882 | punct | ",",Coster |
| R3985 | T7884 | T7882 | npadvmod | Cambridge,Coster |
| R3986 | T7885 | T7884 | punct | ",",Cambridge |
| R3987 | T7886 | T7884 | conj | MA,Cambridge |
| R3988 | T7887 | T7886 | punct | ",",MA |
| R3989 | T7888 | T7886 | npadvmod | USA,MA |
| R3990 | T7889 | T7886 | punct | ),MA |
| R3991 | T7890 | T7884 | prep | for,Cambridge |
| R3992 | T7891 | T7892 | nummod | 45,min |
| R3993 | T7892 | T7890 | pobj | min,for |
| R3994 | T7893 | T7882 | punct | .,Coster |
| R3995 | T7894 | T7895 | amod | Non-adherent,cells |
| R3996 | T7895 | T7897 | nsubjpass | cells,harvested |
| R3997 | T7896 | T7897 | auxpass | were,harvested |
| R3998 | T7897 | T7897 | ROOT | harvested,harvested |
| R3999 | T7898 | T7897 | cc | and,harvested |
| R4000 | T7899 | T7902 | compound | CD4,cells |
| R4001 | T7900 | T7902 | nummod | +,cells |
| R4002 | T7901 | T7902 | compound | T,cells |
| R4003 | T7902 | T7904 | nsubjpass | cells,purified |
| R4004 | T7903 | T7904 | auxpass | were,purified |
| R4005 | T7904 | T7897 | conj | purified,harvested |
| R4006 | T7905 | T7904 | agent | by,purified |
| R4007 | T7906 | T7907 | amod | positive,selection |
| R4008 | T7907 | T7905 | pobj | selection,by |
| R4009 | T7908 | T7910 | mark | as,described |
| R4010 | T7909 | T7910 | advmod | already,described |
| R4011 | T7910 | T7904 | advcl | described,purified |
| R4012 | T7911 | T7904 | punct | .,purified |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7500 | 980-984 | Protein | denotes | CD4+ |
| T7499 | 507-512 | Protein | denotes | DNase |
| T7498 | 491-502 | Protein | denotes | collagenase |
| T7497 | 357-361 | Protein | denotes | CD4+ |
| T7496 | 243-246 | Protein | denotes | CD4 |
| T7495 | 173-177 | Protein | denotes | CD4+ |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7338 | 980-983 | Protein | denotes | CD4 |
| T7337 | 357-360 | Protein | denotes | CD4 |
| T7336 | 243-246 | Protein | denotes | CD4 |
| T7335 | 173-176 | Protein | denotes | CD4 |
| T7333 | 980-983 | Protein | denotes | CD4 |
| T7332 | 357-360 | Protein | denotes | CD4 |
| T7331 | 243-246 | Protein | denotes | CD4 |
| T7330 | 173-176 | Protein | denotes | CD4 |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7321 | 980-983 | Protein | denotes | CD4 |
| T7320 | 357-360 | Protein | denotes | CD4 |
| T7319 | 243-246 | Protein | denotes | CD4 |
| T7318 | 173-176 | Protein | denotes | CD4 |