PMC:1064873 / 7821-8173
Annnotations
LappsTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6554 | 2-5 | Protein | denotes | CRP |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 15535835-7306232-4156885 | 163-165 | 7306232 | denotes | 26 |
biosemtest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6855 | 254-260 | UMLS/C1519269 | denotes | ontrol |
| T6849 | 264-272 | UMLS/C2587213 | denotes | T sample |
| T6848 | 10-13 | UMLS/C1413716 | denotes | l ( |
| T6846 | 277-284 | UMLS/C2347026 | denotes | e obtai |
| T6844 | 10-13 | UMLS/C0006560 | denotes | l ( |
| T6839 | 224-227 | UMLS/C0338831 | denotes | 45. |
| T6837 | 277-284 | UMLS/C0870078 | denotes | e obtai |
| T6834 | 153-161 | UMLS/C1555900 | denotes | emission |
| T6827 | 4-9 | UMLS/C1151254 | denotes | P lev |
| T6822 | 247-252 | UMLS/C0439234 | denotes | ed as |
| T6820 | 153-161 | UMLS/C1611832 | denotes | emission |
| T6818 | 264-272 | UMLS/C0332298 | denotes | T sample |
| T6816 | 313-321 | UMLS/C1705908 | denotes | dergoing |
| T6815 | 45-53 | UMLS/C1705908 | denotes | ith inac |
| T6802 | 153-161 | UMLS/C1608518 | denotes | emission |
| T6799 | 10-13 | UMLS/C1826658 | denotes | l ( |
| T6794 | 140-148 | UMLS/C0243161 | denotes | or clini |
| T6789 | 153-161 | UMLS/C0205210 | denotes | emission |
| T6787 | 104-111 | UMLS/C0557806 | denotes | Rheuma |
| T6785 | 115-127 | UMLS/C0035452 | denotes | gy prelimina |
| T6780 | 264-272 | UMLS/C0243148 | denotes | T sample |
| T6779 | 224-227 | UMLS/C1690528 | denotes | 45. |
| T6777 | 95-103 | UMLS/C0596070 | denotes | ollege o |
| T6773 | 10-13 | UMLS/C1879974 | denotes | l ( |
| T6767 | 39-44 | UMLS/C0205454 | denotes | ents |
| T6765 | 4-9 | UMLS/C1550100 | denotes | P lev |
| T6763 | 304-309 | UMLS/C0205449 | denotes | tient |
| T6762 | 219-223 | UMLS/C0205451 | denotes | age, |
| T6758 | 313-321 | UMLS/C1550655 | denotes | dergoing |
| T6757 | 45-53 | UMLS/C1550655 | denotes | ith inac |
| T6748 | 264-272 | UMLS/C1547100 | denotes | T sample |
| T6737 | 277-284 | UMLS/C0441621 | denotes | e obtai |
| T6735 | 162-171 | UMLS/C0544452 | denotes | [26]. Six |
| T6734 | 59-75 | UMLS/C0544452 | denotes | isease, who sati |
| T6733 | 128-139 | UMLS/C0439611 | denotes | y criteria |
| T6732 | 229-232 | UMLS/C1114365 | denotes | ± 1 |
| T6728 | 14-19 | UMLS/C0456079 | denotes | 10 m |
| T6726 | 264-272 | UMLS/C1550141 | denotes | T sample |
| T6723 | 4-9 | UMLS/C0229671 | denotes | P lev |
| T6720 | 4-9 | UMLS/C1546774 | denotes | P lev |
| T6718 | 115-127 | UMLS/C0334889 | denotes | gy prelimina |
| T6716 | 14-19 | UMLS/C0441889 | denotes | 10 m |
| T6714 | 247-252 | UMLS/C0439508 | denotes | ed as |
| T6710 | 290-298 | UMLS/C1706701 | denotes | om three |
| T6709 | 229-232 | UMLS/C0001811 | denotes | ± 1 |
| T6707 | 229-232 | UMLS/C0001779 | denotes | ± 1 |
| T6702 | 81-90 | UMLS/C0242428 | denotes | the Ameri |
| T6700 | 229-232 | UMLS/C0001792 | denotes | ± 1 |
| T6698 | 290-298 | UMLS/C1301820 | denotes | om three |
| T6697 | 277-284 | UMLS/C0370003 | denotes | e obtai |
| T6693 | 224-227 | UMLS/C1281583 | denotes | 45. |
| T6690 | 224-227 | UMLS/C0086418 | denotes | 45. |
| T6687 | 224-227 | UMLS/C0018563 | denotes | 45. |
| T6683 | 264-272 | UMLS/C0009932 | denotes | T sample |
| T6681 | 224-227 | UMLS/C0030736 | denotes | 45. |
| T6678 | 313-321 | UMLS/C0030705 | denotes | dergoing |
| T6677 | 45-53 | UMLS/C0030705 | denotes | ith inac |
| T6670 | 186-204 | UMLS/C1708335 | denotes | lunteers (11 women |
| T6669 | 10-13 | UMLS/C0201657 | denotes | l ( |
| T6663 | 313-321 | UMLS/C1578479 | denotes | dergoing |
| T6662 | 45-53 | UMLS/C1578479 | denotes | ith inac |
| T6654 | 313-321 | UMLS/C1578483 | denotes | dergoing |
| T6653 | 45-53 | UMLS/C1578483 | denotes | ith inac |
| T6645 | 247-252 | UMLS/C1561543 | denotes | ed as |
| T6642 | 313-321 | UMLS/C1578480 | denotes | dergoing |
| T6641 | 45-53 | UMLS/C1578480 | denotes | ith inac |
| T6633 | 313-321 | UMLS/C1578481 | denotes | dergoing |
| T6632 | 45-53 | UMLS/C1578481 | denotes | ith inac |
| T6624 | 313-321 | UMLS/C1578486 | denotes | dergoing |
| T6623 | 45-53 | UMLS/C1578486 | denotes | ith inac |
| T6615 | 313-321 | UMLS/C1578484 | denotes | dergoing |
| T6614 | 45-53 | UMLS/C1578484 | denotes | ith inac |
| T6606 | 313-321 | UMLS/C1578485 | denotes | dergoing |
| T6605 | 45-53 | UMLS/C1578485 | denotes | ith inac |
| T6592 | 224-227 | UMLS/C0949399 | denotes | 45. |
| T6590 | 219-223 | UMLS/C1533153 | denotes | age, |
| T6584 | 247-252 | UMLS/C1561544 | denotes | ed as |
| T6580 | 10-13 | UMLS/C1413766 | denotes | l ( |
| T6558 | 264-272 | UMLS/C1882979 | denotes | T sample |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7076 | 346-349 | DT | denotes | All |
| T7075 | 333-344 | NN | denotes | replacement |
| T7074 | 328-332 | NN | denotes | knee |
| T7073 | 322-327 | JJ | denotes | total |
| T7072 | 311-321 | VB | denotes | undergoing |
| T7071 | 302-310 | NN | denotes | patients |
| T7070 | 299-301 | NN | denotes | RA |
| T7069 | 293-298 | CD | denotes | three |
| T7068 | 288-292 | IN | denotes | from |
| T7067 | 279-287 | VB | denotes | obtained |
| T7066 | 274-278 | VB | denotes | were |
| T7065 | 266-273 | NN | denotes | samples |
| T7064 | 263-265 | NN | denotes | ST |
| T7063 | 253-261 | NN | denotes | controls |
| T7062 | 250-252 | IN | denotes | as |
| T7061 | 243-249 | VB | denotes | served |
| T7060 | 241-242 | -RRB- | denotes | ) |
| T7059 | 236-241 | NN | denotes | years |
| T7058 | 231-235 | CD | denotes | 11.2 |
| T7057 | 229-230 | CC | denotes | ± |
| T7056 | 224-228 | CD | denotes | 45.8 |
| T7055 | 222-223 | -COMMA- | denotes | , |
| T7054 | 219-222 | NN | denotes | age |
| T7053 | 217-218 | -COLON- | denotes | ; |
| T7052 | 214-217 | NN | denotes | men |
| T7051 | 209-213 | CD | denotes | five |
| T7050 | 205-208 | CC | denotes | and |
| T7049 | 199-204 | NN | denotes | women |
| T7048 | 196-198 | CD | denotes | 11 |
| T7047 | 195-196 | -LRB- | denotes | ( |
| T7046 | 184-194 | NN | denotes | volunteers |
| T7045 | 176-183 | JJ | denotes | healthy |
| T7044 | 168-175 | CD | denotes | Sixteen |
| T7043 | 165-166 | -RRB- | denotes | ] |
| T7042 | 163-165 | CD | denotes | 26 |
| T7041 | 162-163 | -LRB- | denotes | [ |
| T7040 | 152-161 | NN | denotes | remission |
| T7039 | 143-151 | JJ | denotes | clinical |
| T7038 | 139-142 | IN | denotes | for |
| T7037 | 130-138 | NN | denotes | criteria |
| T7036 | 118-129 | JJ | denotes | preliminary |
| T7035 | 105-117 | NNP | denotes | Rheumatology |
| T7034 | 102-104 | IN | denotes | of |
| T7033 | 94-101 | NNP | denotes | College |
| T7032 | 85-93 | NNP | denotes | American |
| T7031 | 81-84 | DT | denotes | the |
| T7030 | 71-80 | VB | denotes | satisfied |
| T7029 | 67-70 | WP | denotes | who |
| T7028 | 65-66 | -COMMA- | denotes | , |
| T7027 | 58-65 | NN | denotes | disease |
| T7026 | 49-57 | JJ | denotes | inactive |
| T7025 | 44-48 | IN | denotes | with |
| T7024 | 35-43 | NN | denotes | patients |
| T7023 | 29-34 | CD | denotes | eight |
| T7022 | 25-28 | CC | denotes | and |
| T7021 | 23-24 | -COLON- | denotes | ; |
| T7020 | 22-23 | -RRB- | denotes | ) |
| T7019 | 18-22 | NN | denotes | mg/l |
| T7018 | 15-17 | CD | denotes | 10 |
| T7017 | 13-14 | NN | denotes | ≥ |
| T7016 | 12-13 | -LRB- | denotes | ( |
| T7015 | 6-11 | NN | denotes | level |
| T7014 | 2-5 | NN | denotes | CRP |
| R3333 | T7015 | T7014 | arg1Of | level,CRP |
| R3334 | T7015 | T7016 | arg1Of | level,( |
| R3335 | T7019 | T7016 | arg2Of | mg/l,( |
| R3336 | T7019 | T7017 | arg1Of | mg/l,≥ |
| R3337 | T7019 | T7018 | arg1Of | mg/l,10 |
| R3338 | T7020 | T7016 | arg3Of | ),( |
| R3340 | T7022 | T7021 | arg1Of | and,; |
| R3341 | T7022 | T7029 | arg1Of | and,who |
| R3342 | T7022 | T7030 | arg1Of | and,satisfied |
| R3343 | T7024 | T7022 | arg2Of | patients,and |
| R3344 | T7024 | T7023 | arg1Of | patients,eight |
| R3345 | T7024 | T7025 | arg1Of | patients,with |
| R3346 | T7024 | T7028 | arg1Of | patients,"," |
| R3347 | T7027 | T7025 | arg2Of | disease,with |
| R3348 | T7027 | T7026 | arg1Of | disease,inactive |
| R3349 | T7033 | T7032 | arg1Of | College,American |
| R3350 | T7033 | T7034 | arg1Of | College,of |
| R3351 | T7035 | T7034 | arg2Of | Rheumatology,of |
| R3352 | T7037 | T7030 | arg2Of | criteria,satisfied |
| R3353 | T7037 | T7031 | arg1Of | criteria,the |
| R3354 | T7037 | T7033 | arg1Of | criteria,College |
| R3355 | T7037 | T7036 | arg1Of | criteria,preliminary |
| R3356 | T7037 | T7038 | arg1Of | criteria,for |
| R3357 | T7040 | T7038 | arg2Of | remission,for |
| R3358 | T7040 | T7039 | arg1Of | remission,clinical |
| R3359 | T7040 | T7041 | arg1Of | remission,[ |
| R3360 | T7042 | T7041 | arg2Of | 26,[ |
| R3361 | T7043 | T7041 | arg3Of | ],[ |
| R3362 | T7046 | T7044 | arg1Of | volunteers,Sixteen |
| R3363 | T7046 | T7045 | arg1Of | volunteers,healthy |
| R3364 | T7046 | T7047 | arg1Of | volunteers,( |
| R3365 | T7046 | T7061 | arg1Of | volunteers,served |
| R3366 | T7049 | T7048 | arg1Of | women,11 |
| R3367 | T7049 | T7050 | arg1Of | women,and |
| R3368 | T7050 | T7047 | arg2Of | and,( |
| R3369 | T7050 | T7053 | arg1Of | and,; |
| R3370 | T7052 | T7050 | arg2Of | men,and |
| R3371 | T7052 | T7051 | arg1Of | men,five |
| R3372 | T7054 | T7053 | arg2Of | age,; |
| R3373 | T7054 | T7055 | arg1Of | age,"," |
| R3374 | T7056 | T7057 | arg1Of | 45.8,± |
| R3375 | T7058 | T7057 | arg2Of | 11.2,± |
| R3376 | T7059 | T7055 | arg2Of | years,"," |
| R3377 | T7059 | T7056 | arg1Of | years,45.8 |
| R3378 | T7059 | T7058 | arg1Of | years,11.2 |
| R3379 | T7060 | T7047 | arg3Of | ),( |
| R3380 | T7061 | T7062 | arg1Of | served,as |
| R3381 | T7063 | T7062 | arg2Of | controls,as |
| R3382 | T7065 | T7064 | arg1Of | samples,ST |
| R3383 | T7065 | T7066 | arg1Of | samples,were |
| R3384 | T7065 | T7067 | arg2Of | samples,obtained |
| R3385 | T7067 | T7066 | arg2Of | obtained,were |
| R3386 | T7067 | T7068 | arg1Of | obtained,from |
| R3387 | T7071 | T7068 | arg2Of | patients,from |
| R3388 | T7071 | T7069 | arg1Of | patients,three |
| R3389 | T7071 | T7070 | arg1Of | patients,RA |
| R3390 | T7071 | T7072 | arg1Of | patients,undergoing |
| R3391 | T7075 | T7072 | arg2Of | replacement,undergoing |
| R3392 | T7075 | T7073 | arg1Of | replacement,total |
| R3393 | T7075 | T7074 | arg1Of | replacement,knee |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6557 | 328-332 | http://purl.obolibrary.org/obo/UBERON_0001465 | denotes | knee |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6866 | 219-222 | http://purl.obolibrary.org/obo/GO_0007568 | denotes | age |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6863 | 263-345 | Sentence | denotes | ST samples were obtained from three RA patients undergoing total knee replacement. |
| T6862 | 168-262 | Sentence | denotes | Sixteen healthy volunteers (11 women and five men; age, 45.8 ± 11.2 years) served as controls. |
| T43 | 168-262 | Sentence | denotes | Sixteen healthy volunteers (11 women and five men; age, 45.8 ± 11.2 years) served as controls. |
| T44 | 263-345 | Sentence | denotes | ST samples were obtained from three RA patients undergoing total knee replacement. |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7311 | 2-5 | Protein | denotes | CRP |
| T7302 | 263-265 | Protein | denotes | ST |
| T7301 | 299-301 | Protein | denotes | RA |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7232 | 23-24 | : | denotes | ; |
| T7231 | 22-23 | -RRB- | denotes | ) |
| T7230 | 18-22 | NN | denotes | mg/l |
| T7229 | 15-17 | CD | denotes | 10 |
| T7228 | 13-14 | FW | denotes | ≥ |
| T7227 | 12-13 | -LRB- | denotes | ( |
| T7226 | 6-11 | NN | denotes | level |
| T7225 | 2-5 | NNP | denotes | CRP |
| T7290 | 346-349 | DT | denotes | All |
| T7289 | 344-345 | . | denotes | . |
| T7288 | 333-344 | NN | denotes | replacement |
| T7287 | 328-332 | NN | denotes | knee |
| T7286 | 322-327 | JJ | denotes | total |
| T7285 | 311-321 | VBG | denotes | undergoing |
| T7265 | 217-218 | : | denotes | ; |
| T7264 | 214-217 | NNS | denotes | men |
| T7263 | 209-213 | CD | denotes | five |
| T7262 | 205-208 | CC | denotes | and |
| T7261 | 199-204 | NNS | denotes | women |
| T7260 | 196-198 | CD | denotes | 11 |
| T7259 | 195-196 | -LRB- | denotes | ( |
| T7258 | 184-194 | NNS | denotes | volunteers |
| T7257 | 176-183 | JJ | denotes | healthy |
| T7256 | 168-175 | CD | denotes | Sixteen |
| T7255 | 166-167 | . | denotes | . |
| T7254 | 165-166 | NNP | denotes | ] |
| T7253 | 163-165 | CD | denotes | 26 |
| T7252 | 162-163 | NNP | denotes | [ |
| T7251 | 152-161 | NN | denotes | remission |
| T7250 | 143-151 | JJ | denotes | clinical |
| T7249 | 139-142 | IN | denotes | for |
| T7248 | 130-138 | NNS | denotes | criteria |
| T7247 | 118-129 | JJ | denotes | preliminary |
| T7246 | 105-117 | NNP | denotes | Rheumatology |
| T7245 | 102-104 | IN | denotes | of |
| T7244 | 94-101 | NNP | denotes | College |
| T7243 | 85-93 | JJ | denotes | American |
| T7242 | 81-84 | DT | denotes | the |
| T7241 | 71-80 | VBD | denotes | satisfied |
| T7240 | 67-70 | WP | denotes | who |
| T7239 | 65-66 | , | denotes | , |
| T7238 | 58-65 | NN | denotes | disease |
| T7237 | 49-57 | JJ | denotes | inactive |
| T7236 | 44-48 | IN | denotes | with |
| T7235 | 35-43 | NNS | denotes | patients |
| T7234 | 29-34 | CD | denotes | eight |
| T7233 | 25-28 | CC | denotes | and |
| T7284 | 302-310 | NNS | denotes | patients |
| T7283 | 299-301 | NNP | denotes | RA |
| T7282 | 293-298 | CD | denotes | three |
| T7281 | 288-292 | IN | denotes | from |
| T7280 | 279-287 | VBN | denotes | obtained |
| T7279 | 274-278 | VBD | denotes | were |
| T7278 | 266-273 | NNS | denotes | samples |
| T7277 | 263-265 | NNP | denotes | ST |
| T7276 | 261-262 | . | denotes | . |
| T7275 | 253-261 | NNS | denotes | controls |
| T7274 | 250-252 | IN | denotes | as |
| T7273 | 243-249 | VBD | denotes | served |
| T7272 | 241-242 | -RRB- | denotes | ) |
| T7271 | 236-241 | NNS | denotes | years |
| T7270 | 231-235 | CD | denotes | 11.2 |
| T7269 | 229-230 | NN | denotes | ± |
| T7268 | 224-228 | CD | denotes | 45.8 |
| T7267 | 222-223 | , | denotes | , |
| T7266 | 219-222 | NN | denotes | age |
| R3542 | T7225 | T7226 | compound | CRP,level |
| R3544 | T7227 | T7228 | punct | (,≥ |
| R3545 | T7228 | T7230 | nmod | ≥,mg/l |
| R3546 | T7229 | T7230 | nummod | 10,mg/l |
| R3547 | T7230 | T7226 | appos | mg/l,level |
| R3548 | T7231 | T7226 | punct | ),level |
| R3551 | T7234 | T7235 | nummod | eight,patients |
| R3553 | T7236 | T7235 | prep | with,patients |
| R3554 | T7237 | T7238 | amod | inactive,disease |
| R3555 | T7238 | T7236 | pobj | disease,with |
| R3556 | T7239 | T7238 | punct | ",",disease |
| R3557 | T7240 | T7241 | nsubj | who,satisfied |
| R3559 | T7242 | T7244 | det | the,College |
| R3560 | T7243 | T7244 | compound | American,College |
| R3561 | T7244 | T7241 | dobj | College,satisfied |
| R3562 | T7245 | T7244 | prep | of,College |
| R3563 | T7246 | T7248 | amod | Rheumatology,criteria |
| R3564 | T7247 | T7248 | amod | preliminary,criteria |
| R3565 | T7248 | T7245 | pobj | criteria,of |
| R3566 | T7249 | T7248 | prep | for,criteria |
| R3567 | T7250 | T7251 | amod | clinical,remission |
| R3568 | T7251 | T7249 | pobj | remission,for |
| R3569 | T7252 | T7254 | nmod | [,] |
| R3570 | T7253 | T7254 | nummod | 26,] |
| R3571 | T7254 | T7244 | appos | ],College |
| R3573 | T7256 | T7258 | nummod | Sixteen,volunteers |
| R3574 | T7257 | T7258 | amod | healthy,volunteers |
| R3575 | T7258 | T7273 | nsubj | volunteers,served |
| R3576 | T7259 | T7258 | punct | (,volunteers |
| R3577 | T7260 | T7261 | nummod | 11,women |
| R3578 | T7261 | T7258 | appos | women,volunteers |
| R3579 | T7262 | T7261 | cc | and,women |
| R3580 | T7263 | T7264 | nummod | five,men |
| R3581 | T7264 | T7261 | conj | men,women |
| R3582 | T7265 | T7258 | punct | ;,volunteers |
| R3583 | T7266 | T7258 | appos | age,volunteers |
| R3584 | T7267 | T7266 | punct | ",",age |
| R3585 | T7268 | T7269 | nummod | 45.8,± |
| R3586 | T7269 | T7266 | appos | ±,age |
| R3590 | T7273 | T7273 | ROOT | served,served |
| R3591 | T7274 | T7273 | prep | as,served |
| R3592 | T7275 | T7274 | pobj | controls,as |
| R3593 | T7276 | T7273 | punct | .,served |
| R3594 | T7277 | T7278 | compound | ST,samples |
| R3595 | T7278 | T7280 | nsubjpass | samples,obtained |
| R3596 | T7279 | T7280 | auxpass | were,obtained |
| R3597 | T7280 | T7280 | ROOT | obtained,obtained |
| R3598 | T7281 | T7280 | prep | from,obtained |
| R3599 | T7282 | T7284 | nummod | three,patients |
| R3600 | T7283 | T7284 | compound | RA,patients |
| R3601 | T7284 | T7281 | pobj | patients,from |
| R3602 | T7285 | T7284 | acl | undergoing,patients |
| R3603 | T7286 | T7288 | amod | total,replacement |
| R3604 | T7287 | T7288 | compound | knee,replacement |
| R3605 | T7288 | T7285 | dobj | replacement,undergoing |
| R3606 | T7289 | T7280 | punct | .,obtained |
| R3587 | T7270 | T7271 | nummod | 11.2,years |
| R3588 | T7271 | T7269 | appos | years,± |
| R3589 | T7272 | T7258 | punct | ),volunteers |