PMC:1064873 / 6880-7088
Annnotations
LappsTest
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biosemtest
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pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T3536","span":{"begin":100,"end":103},"obj":"Protein"},{"id":"T3535","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T3534","span":{"begin":54,"end":59},"obj":"Protein"},{"id":"T3533","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T3532","span":{"begin":0,"end":5},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"STAT3 phosphorylation by IL-10, and the expression of SOCS1 and SOCS3 mRNA in peripheral blood (PB) CD4+ T cells from RA patients.\n\nMaterials and methods\n\nPatients and samples\nThe total patient population con"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3698","span":{"begin":0,"end":5},"obj":"http://www.uniprot.org/uniprot/P40763"},{"id":"T3689","span":{"begin":25,"end":30},"obj":"http://www.uniprot.org/uniprot/P22301"},{"id":"T3864","span":{"begin":54,"end":59},"obj":"http://www.uniprot.org/uniprot/O15524"},{"id":"T3847","span":{"begin":100,"end":103},"obj":"http://www.uniprot.org/uniprot/P01730"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"STAT3 phosphorylation by IL-10, and the expression of SOCS1 and SOCS3 mRNA in peripheral blood (PB) CD4+ T cells from RA patients.\n\nMaterials and methods\n\nPatients and samples\nThe total patient population con"}
UBERON-AE
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GO-BP
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GO-CC
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GO-MF
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sentences
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simple1
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BioNLP16_DUT
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BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T4913","span":{"begin":40,"end":50},"obj":"Gene_expression"},{"id":"T4911","span":{"begin":6,"end":21},"obj":"Phosphorylation"},{"id":"T4887","span":{"begin":100,"end":103},"obj":"Protein"},{"id":"T4886","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T4885","span":{"begin":54,"end":59},"obj":"Protein"},{"id":"T4884","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T4883","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R1951","pred":"themeOf","subj":"T4883","obj":"T4911"},{"id":"R1960","pred":"themeOf","subj":"T4885","obj":"T4913"},{"id":"R1962","pred":"themeOf","subj":"T4886","obj":"T4913"}],"text":"STAT3 phosphorylation by IL-10, and the expression of SOCS1 and SOCS3 mRNA in peripheral blood (PB) CD4+ T cells from RA patients.\n\nMaterials and methods\n\nPatients and samples\nThe total patient population con"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T5933","span":{"begin":40,"end":50},"obj":"Gene_expression"},{"id":"T5932","span":{"begin":6,"end":21},"obj":"Phosphorylation"},{"id":"T5899","span":{"begin":100,"end":103},"obj":"Protein"},{"id":"T5898","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T5897","span":{"begin":54,"end":59},"obj":"Protein"},{"id":"T5896","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T5895","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R2938","pred":"themeOf","subj":"T5895","obj":"T5932"},{"id":"R2944","pred":"themeOf","subj":"T5897","obj":"T5933"},{"id":"R2945","pred":"themeOf","subj":"T5898","obj":"T5933"}],"text":"STAT3 phosphorylation by IL-10, and the expression of SOCS1 and SOCS3 mRNA in peripheral blood (PB) CD4+ T cells from RA patients.\n\nMaterials and methods\n\nPatients and samples\nThe total patient population con"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T6284","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T6181","span":{"begin":113,"end":120},"obj":"Protein"},{"id":"T6223","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T6280","span":{"begin":22,"end":30},"obj":"Protein"},{"id":"T6266","span":{"begin":105,"end":112},"obj":"Entity"},{"id":"T6261","span":{"begin":54,"end":59},"obj":"Protein"},{"id":"T6328","span":{"begin":100,"end":103},"obj":"Protein"},{"id":"T6324","span":{"begin":96,"end":98},"obj":"Protein"},{"id":"T6367","span":{"begin":36,"end":69},"obj":"Gene_expression"},{"id":"T6366","span":{"begin":36,"end":69},"obj":"Gene_expression"}],"relations":[{"id":"R3112","pred":"themeOf","subj":"T6223","obj":"T6366"},{"id":"R3116","pred":"themeOf","subj":"T6261","obj":"T6367"}],"text":"STAT3 phosphorylation by IL-10, and the expression of SOCS1 and SOCS3 mRNA in peripheral blood (PB) CD4+ T cells from RA patients.\n\nMaterials and methods\n\nPatients and samples\nThe total patient population con"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T7087","span":{"begin":194,"end":204},"obj":"NN"},{"id":"T7086","span":{"begin":186,"end":193},"obj":"JJ"},{"id":"T7085","span":{"begin":180,"end":185},"obj":"JJ"},{"id":"T7084","span":{"begin":176,"end":179},"obj":"DT"},{"id":"T7083","span":{"begin":168,"end":175},"obj":"NNS"},{"id":"T7082","span":{"begin":164,"end":167},"obj":"CC"},{"id":"T7081","span":{"begin":155,"end":163},"obj":"NNS"},{"id":"T5824","span":{"begin":129,"end":130},"obj":"."},{"id":"T5823","span":{"begin":121,"end":129},"obj":"NNS"},{"id":"T5822","span":{"begin":118,"end":120},"obj":"NNP"},{"id":"T5821","span":{"begin":113,"end":117},"obj":"IN"},{"id":"T5820","span":{"begin":107,"end":112},"obj":"NNS"},{"id":"T5819","span":{"begin":105,"end":106},"obj":"NNP"},{"id":"T5818","span":{"begin":103,"end":104},"obj":"CD"},{"id":"T5817","span":{"begin":100,"end":103},"obj":"NNP"},{"id":"T5816","span":{"begin":98,"end":99},"obj":"-RRB-"},{"id":"T5815","span":{"begin":96,"end":98},"obj":"NNP"},{"id":"T5814","span":{"begin":95,"end":96},"obj":"-LRB-"},{"id":"T5813","span":{"begin":89,"end":94},"obj":"NN"},{"id":"T5812","span":{"begin":78,"end":88},"obj":"JJ"},{"id":"T5811","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T5810","span":{"begin":70,"end":74},"obj":"NNP"},{"id":"T5809","span":{"begin":64,"end":69},"obj":"CD"},{"id":"T5808","span":{"begin":60,"end":63},"obj":"CC"},{"id":"T5807","span":{"begin":54,"end":59},"obj":"CD"},{"id":"T5806","span":{"begin":51,"end":53},"obj":"IN"},{"id":"T5805","span":{"begin":40,"end":50},"obj":"NN"},{"id":"T5804","span":{"begin":36,"end":39},"obj":"DT"},{"id":"T5803","span":{"begin":32,"end":35},"obj":"CC"},{"id":"T5802","span":{"begin":30,"end":31},"obj":","},{"id":"T5801","span":{"begin":25,"end":30},"obj":"NNP"},{"id":"T5800","span":{"begin":22,"end":24},"obj":"IN"},{"id":"T5799","span":{"begin":6,"end":21},"obj":"NN"},{"id":"T5798","span":{"begin":0,"end":5},"obj":"CD"}],"relations":[{"id":"R2829","pred":"prep","subj":"T5806","obj":"T5805"},{"id":"R2835","pred":"pobj","subj":"T5807","obj":"T5806"},{"id":"R2840","pred":"cc","subj":"T5808","obj":"T5807"},{"id":"R2847","pred":"conj","subj":"T5809","obj":"T5807"},{"id":"R2851","pred":"appos","subj":"T5810","obj":"T5805"},{"id":"R2856","pred":"prep","subj":"T5811","obj":"T5799"},{"id":"R2859","pred":"amod","subj":"T5812","obj":"T5813"},{"id":"R2864","pred":"pobj","subj":"T5813","obj":"T5811"},{"id":"R2867","pred":"punct","subj":"T5814","obj":"T5815"},{"id":"R2872","pred":"nummod","subj":"T5798","obj":"T5799"},{"id":"R2874","pred":"prep","subj":"T5800","obj":"T5799"},{"id":"R2875","pred":"punct","subj":"T5816","obj":"T5815"},{"id":"R2876","pred":"pobj","subj":"T5801","obj":"T5800"},{"id":"R2877","pred":"punct","subj":"T5802","obj":"T5799"},{"id":"R2878","pred":"cc","subj":"T5803","obj":"T5799"},{"id":"R2879","pred":"nsubj","subj":"T5817","obj":"T5820"},{"id":"R2880","pred":"det","subj":"T5804","obj":"T5805"},{"id":"R2881","pred":"conj","subj":"T5805","obj":"T5799"},{"id":"R2882","pred":"nummod","subj":"T5818","obj":"T5820"},{"id":"R2883","pred":"compound","subj":"T5819","obj":"T5820"},{"id":"R2884","pred":"ROOT","subj":"T5820","obj":"T5820"},{"id":"R2885","pred":"prep","subj":"T5821","obj":"T5820"},{"id":"R2887","pred":"compound","subj":"T5822","obj":"T5823"},{"id":"R2889","pred":"pobj","subj":"T5823","obj":"T5821"},{"id":"R2894","pred":"punct","subj":"T5824","obj":"T5820"},{"id":"R3398","pred":"ROOT","subj":"T7081","obj":"T7081"},{"id":"R3399","pred":"cc","subj":"T7082","obj":"T7081"},{"id":"R3400","pred":"conj","subj":"T7083","obj":"T7081"},{"id":"R3401","pred":"det","subj":"T7084","obj":"T7087"},{"id":"R3402","pred":"amod","subj":"T7085","obj":"T7087"},{"id":"R3403","pred":"amod","subj":"T7086","obj":"T7087"}],"text":"STAT3 phosphorylation by IL-10, and the expression of SOCS1 and SOCS3 mRNA in peripheral blood (PB) CD4+ T cells from RA patients.\n\nMaterials and methods\n\nPatients and samples\nThe total patient population con"}
bionlp-st-ge-2016-test-tees
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test3
{"project":"test3","denotations":[{"id":"T2255","span":{"begin":100,"end":103},"obj":"Protein"},{"id":"T2254","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T2253","span":{"begin":54,"end":59},"obj":"Protein"},{"id":"T2252","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T2251","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T2426","span":{"begin":100,"end":103},"obj":"Protein"},{"id":"T2425","span":{"begin":64,"end":69},"obj":"Protein"},{"id":"T2424","span":{"begin":54,"end":59},"obj":"Protein"},{"id":"T2423","span":{"begin":40,"end":50},"obj":"Gene_expression"},{"id":"T2422","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T2421","span":{"begin":6,"end":21},"obj":"Phosphorylation"},{"id":"T2420","span":{"begin":0,"end":5},"obj":"Protein"}],"relations":[{"id":"R824","pred":"themeOf","subj":"T2420","obj":"T2421"},{"id":"R827","pred":"themeOf","subj":"T2424","obj":"T2423"},{"id":"R828","pred":"themeOf","subj":"T2425","obj":"T2423"}],"text":"STAT3 phosphorylation by IL-10, and the expression of SOCS1 and SOCS3 mRNA in peripheral blood (PB) CD4+ T cells from RA patients.\n\nMaterials and methods\n\nPatients and samples\nThe total patient population con"}
testone
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