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PMC:1064873 / 563-835 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T431 61-70 OCCURRENCE denotes increased
T425 150-159 OCCURRENCE denotes sustained
T402 266-268 state denotes IL
T401 263-265 country_code denotes ml
T400 260-262 country_code denotes ng
T399 239-241 country_code denotes by
T398 218-220 country_code denotes it
T397 160-162 country_code denotes in
T396 42-44 state denotes IL
T234 271-272 . denotes .
T233 269-271 CD denotes 10
T232 266-269 NNP denotes IL-
T231 263-265 NN denotes ml
T230 262-263 NN denotes /
T229 260-262 NN denotes ng
T228 258-259 CD denotes 1
T227 255-257 IN denotes of
T226 246-254 NN denotes presence
T225 242-245 DT denotes the
T224 239-241 IN denotes by
T223 229-238 JJ denotes augmented
T222 225-228 RB denotes not
T221 221-224 VBD denotes was
T220 218-220 PRP denotes it
T219 214-217 CC denotes but
T218 212-213 , denotes ,
T217 210-212 NNP denotes RA
T216 207-209 IN denotes of
T215 201-206 NNS denotes cells
T214 199-200 NN denotes T
T213 197-198 NN denotes +
T212 196-197 CD denotes 4
T211 194-196 NNP denotes CD
T210 187-193 NN denotes tissue
T209 178-186 NN denotes synovial
T208 174-177 CC denotes and
T207 168-173 NN denotes blood
T206 163-167 DT denotes both
T205 160-162 IN denotes in
T204 150-159 VBN denotes sustained
T203 146-149 VBD denotes was
T202 144-145 CD denotes 3
T201 130-143 NN denotes transcription
T200 127-129 IN denotes of
T199 117-126 NN denotes activator
T198 113-116 CC denotes and
T197 102-112 NN denotes transducer
T196 95-101 NN denotes signal
T195 92-94 IN denotes of
T194 76-91 NN denotes phosphorylation
T193 72-75 DT denotes The
T192 70-71 . denotes .
T191 61-70 VBN denotes increased
T190 57-60 VBD denotes was
T189 48-56 NN denotes receptor
T188 45-47 CD denotes 10
T187 42-45 NNP denotes IL-
T186 40-41 CD denotes 1
T185 35-39 NN denotes type
T184 31-34 DT denotes the
T183 28-30 IN denotes of
T182 17-27 NN denotes expression
T181 9-16 NN denotes surface
T180 3-8 PRP$ denotes their

biosemtest

Id Subject Object Predicate Lexical cue
T868 260-265 UMLS/C0439275 denotes ng/ml
T839 225-228 UMLS/C1518422 denotes not
T709 61-70 UMLS/C0442805 denotes increased
T703 199-206 UMLS/C0039194 denotes T cells
T699 61-70 UMLS/C0442808 denotes increased
T691 168-173 UMLS/C0229664 denotes blood
T684 42-56 UMLS/C0247771 denotes IL-10 receptor
T680 266-271 UMLS/C1149215 denotes IL-10
T655 95-145 UP/Q19S50 denotes signal transducer and activator of transcription 3
T648 17-27 UMLS/C0185117 denotes expression
T614 266-271 UMLS/C1522550 denotes IL-10
T607 266-271 UMLS/C1334098 denotes IL-10
T581 246-254 UMLS/C0392148 denotes presence
T561 17-27 UMLS/C0017262 denotes expression
T529 178-193 UMLS/C1267208 denotes synovial tissue
T526 168-173 UMLS/C0392895 denotes blood
T525 9-16 UMLS/C0205148 denotes surface
T475 95-145 UP/P52631 denotes signal transducer and activator of transcription 3
T470 95-145 UP/P42227 denotes signal transducer and activator of transcription 3
T463 95-145 UP/P40763 denotes signal transducer and activator of transcription 3
T456 76-91 UMLS/C0031715 denotes phosphorylation
T450 95-145 UP/Q6DV79 denotes signal transducer and activator of transcription 3
T777 229-238 UMLS/C0205217 denotes augmented
T776 61-70 UMLS/C0205217 denotes increased
T774 150-159 UMLS/C0443318 denotes sustained
T769 168-173 UMLS/C0005767 denotes blood
T766 168-173 UMLS/C0005768 denotes blood
T753 95-145 UP/P61635 denotes signal transducer and activator of transcription 3
T744 95-145 UMLS/C0253050 denotes signal transducer and activator of transcription 3
T729 246-254 UMLS/C0150312 denotes presence
T497 266-271 UMLS/C0085295 denotes IL-10
T484 214-217 UMLS/C0005341 denotes but

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1287 266-271 NN denotes IL-10
T1286 260-265 NN denotes ng/ml
T1285 258-259 CD denotes 1
T1284 255-257 IN denotes of
T1283 246-254 NN denotes presence
T1282 242-245 DT denotes the
T1281 239-241 IN denotes by
T1280 229-238 VB denotes augmented
T1279 225-228 RB denotes not
T1278 221-224 VB denotes was
T1277 218-220 PRP denotes it
T1276 214-217 CC denotes but
T1275 212-213 -COMMA- denotes ,
T1274 210-212 NN denotes RA
T1273 207-209 IN denotes of
T1272 201-206 NN denotes cells
T1271 199-200 NN denotes T
T1270 194-198 JJ denotes CD4+
T1269 187-193 NN denotes tissue
T1268 178-186 JJ denotes synovial
T1267 174-177 CC denotes and
T1266 168-173 NN denotes blood
T1265 163-167 CC denotes both
T1264 160-162 IN denotes in
T1263 150-159 JJ denotes sustained
T1262 146-149 VB denotes was
T1261 144-145 CD denotes 3
T1260 130-143 NN denotes transcription
T1259 127-129 IN denotes of
T1258 117-126 NN denotes activator
T1257 113-116 CC denotes and
T1256 102-112 NN denotes transducer
T1255 95-101 NN denotes signal
T1254 92-94 IN denotes of
T1253 76-91 NN denotes phosphorylation
T1252 72-75 DT denotes The
T1251 61-70 VB denotes increased
T1250 57-60 VB denotes was
T1249 48-56 NN denotes receptor
T1248 42-47 NN denotes IL-10
T1247 40-41 CD denotes 1
T1246 35-39 NN denotes type
T1245 31-34 DT denotes the
T1244 28-30 IN denotes of
T1243 17-27 NN denotes expression
T1242 9-16 NN denotes surface
T1241 3-8 PRP-DOLLAR- denotes their
R137 T1243 T1241 arg1Of expression,their
R138 T1243 T1242 arg1Of expression,surface
R139 T1243 T1244 arg1Of expression,of
R140 T1243 T1250 arg1Of expression,was
R141 T1243 T1251 arg2Of expression,increased
R142 T1249 T1244 arg2Of receptor,of
R143 T1249 T1245 arg1Of receptor,the
R144 T1249 T1246 arg1Of receptor,type
R145 T1249 T1247 arg1Of receptor,1
R146 T1249 T1248 arg1Of receptor,IL-10
R148 T1251 T1250 arg2Of increased,was
R149 T1253 T1252 arg1Of phosphorylation,The
R150 T1253 T1254 arg1Of phosphorylation,of
R151 T1253 T1262 arg1Of phosphorylation,was
R152 T1253 T1263 arg1Of phosphorylation,sustained
R153 T1256 T1257 arg1Of transducer,and
R154 T1258 T1257 arg2Of activator,and
R155 T1260 T1254 arg2Of transcription,of
R156 T1260 T1255 arg1Of transcription,signal
R157 T1260 T1256 arg1Of transcription,transducer
R158 T1260 T1258 arg1Of transcription,activator
R159 T1260 T1259 arg1Of transcription,of
R160 T1260 T1261 arg1Of transcription,3
R161 T1262 T1264 arg1Of was,in
R162 T1262 T1276 arg1Of was,but
R163 T1263 T1262 arg2Of sustained,was
R164 T1266 T1267 arg1Of blood,and
R165 T1267 T1264 arg2Of and,in
R166 T1267 T1265 arg1Of and,both
R167 T1272 T1267 arg2Of cells,and
R168 T1272 T1268 arg1Of cells,synovial
R169 T1272 T1269 arg1Of cells,tissue
R170 T1272 T1270 arg1Of cells,CD4+
R171 T1272 T1271 arg1Of cells,T
R172 T1272 T1273 arg1Of cells,of
R173 T1274 T1273 arg2Of RA,of
R174 T1276 T1275 arg1Of but,","
R175 T1277 T1278 arg1Of it,was
R176 T1277 T1280 arg2Of it,augmented
R177 T1280 T1276 arg2Of augmented,but
R178 T1280 T1278 arg2Of augmented,was
R179 T1280 T1279 arg1Of augmented,not
R180 T1280 T1281 arg1Of augmented,by
R181 T1283 T1281 arg2Of presence,by
R182 T1283 T1282 arg1Of presence,the
R183 T1283 T1284 arg1Of presence,of
R184 T1285 T1286 arg1Of 1,ng/ml
R185 T1287 T1284 arg2Of IL-10,of
R186 T1287 T1285 arg1Of IL-10,1

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T978 35-56 Protein denotes type 1 IL-10 receptor
T979 95-145 Protein denotes signal transducer and activator of transcription 3
T980 194-197 Protein denotes CD4
T981 266-271 Protein denotes IL-10

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1032 42-47 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1033 266-271 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1043 194-197 http://www.uniprot.org/uniprot/P01730 denotes CD4

UBERON-AE

Id Subject Object Predicate Lexical cue
T436 187-193 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
T435 168-173 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood

GO-BP

Id Subject Object Predicate Lexical cue
T910 130-143 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T908 76-91 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T907 42-56 http://purl.obolibrary.org/obo/GO_0004920 denotes IL-10 receptor

GO-CC

Id Subject Object Predicate Lexical cue
T1017 201-206 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T1010 42-56 http://purl.obolibrary.org/obo/GO_0004920 denotes IL-10 receptor
T1009 40-44 http://purl.obolibrary.org/obo/GO_0005149 denotes 1 IL
T1002 266-271 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10
T1001 42-47 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

sentences

Id Subject Object Predicate Lexical cue
T885 72-272 Sentence denotes The phosphorylation of signal transducer and activator of transcription 3 was sustained in both blood and synovial tissue CD4+ T cells of RA, but it was not augmented by the presence of 1 ng/ml IL-10.
T5 72-272 Sentence denotes The phosphorylation of signal transducer and activator of transcription 3 was sustained in both blood and synovial tissue CD4+ T cells of RA, but it was not augmented by the presence of 1 ng/ml IL-10.

simple1

Id Subject Object Predicate Lexical cue
T1133 35-56 Protein denotes type 1 IL-10 receptor
T1134 95-145 Protein denotes signal transducer and activator of transcription 3
T1135 194-197 Protein denotes CD4
T1136 266-271 Protein denotes IL-10

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1933 266-271 Protein denotes IL-10
T1932 194-197 Protein denotes CD4
T1931 95-145 Protein denotes signal transducer and activator of transcription 3
T1927 35-56 Protein denotes type 1 IL-10 receptor
T1957 76-91 Phosphorylation denotes phosphorylation
T1956 229-238 Positive_regulation denotes augmented
T1954 17-27 Gene_expression denotes expression
T1953 61-70 Positive_regulation denotes increased
R629 T1927 T1954 themeOf type 1 IL-10 receptor,expression
R631 T1931 T1956 themeOf signal transducer and activator of transcription 3,augmented
R632 T1931 T1957 themeOf signal transducer and activator of transcription 3,phosphorylation
R641 T1954 T1953 themeOf expression,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1453 76-91 Phosphorylation denotes phosphorylation
T1452 229-238 Positive_regulation denotes augmented
T1451 61-70 Positive_regulation denotes increased
T1449 17-27 Gene_expression denotes expression
T1429 266-271 Protein denotes IL-10
T1428 194-197 Protein denotes CD4
T1427 95-145 Protein denotes signal transducer and activator of transcription 3
T1423 35-56 Protein denotes type 1 IL-10 receptor
R319 T1423 T1449 themeOf type 1 IL-10 receptor,expression
R321 T1427 T1452 themeOf signal transducer and activator of transcription 3,augmented
R322 T1427 T1453 themeOf signal transducer and activator of transcription 3,phosphorylation
R328 T1449 T1451 themeOf expression,increased

DLUT931

Id Subject Object Predicate Lexical cue
T1499 229-238 Positive_regulation denotes augmented
T1498 76-91 Phosphorylation denotes phosphorylation
T1497 61-70 Positive_regulation denotes increased
T1496 17-27 Gene_expression denotes expression
T1474 266-271 Protein denotes IL-10
T1473 194-197 Protein denotes CD4
T1472 95-145 Protein denotes signal transducer and activator of transcription 3
T1468 35-56 Protein denotes type 1 IL-10 receptor
R334 T1468 T1496 themeOf type 1 IL-10 receptor,expression
R337 T1472 T1498 themeOf signal transducer and activator of transcription 3,phosphorylation
R347 T1496 T1497 themeOf expression,increased
R348 T1498 T1499 themeOf phosphorylation,augmented

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1910 72-145 Phosphorylation denotes The phosphorylation of signal transducer and activator of transcription 3
T1904 28-56 Protein denotes of the type 1 IL-10 receptor
T1902 92-145 Protein denotes of signal transducer and activator of transcription 3
T1894 42-47 Protein denotes IL-10
T1883 255-271 Protein denotes of 1 ng/ml IL-10
T1867 28-56 Protein denotes of the type 1 IL-10 receptor
T1861 210-212 Protein denotes RA
T1860 194-213 Entity denotes CD4+ T cells of RA,
R624 T1902 T1910 themeOf of signal transducer and activator of transcription 3,The phosphorylation of signal transducer and activator of transcription 3

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1689 271-272 . denotes .
T1688 266-271 NN denotes IL-10
T1687 260-265 NN denotes ng/ml
T1686 258-259 CD denotes 1
T1685 255-257 IN denotes of
T1684 246-254 NN denotes presence
T1683 242-245 DT denotes the
T1682 239-241 IN denotes by
T1681 229-238 VBN denotes augmented
T1680 225-228 RB denotes not
T1679 221-224 VBD denotes was
T1678 218-220 PRP denotes it
T1677 214-217 CC denotes but
T1676 212-213 , denotes ,
T1675 210-212 NNP denotes RA
T1674 207-209 IN denotes of
T1673 201-206 NNS denotes cells
T1672 199-200 NNP denotes T
T1671 197-198 NNP denotes +
T1670 194-197 NNP denotes CD4
T1669 187-193 NN denotes tissue
T1668 178-186 JJ denotes synovial
T1667 174-177 CC denotes and
T1666 168-173 NN denotes blood
T1665 163-167 DT denotes both
T1664 160-162 IN denotes in
T1663 150-159 VBN denotes sustained
T1662 146-149 VBD denotes was
T1661 144-145 CD denotes 3
T1660 130-143 NN denotes transcription
T1659 127-129 IN denotes of
T1658 117-126 NN denotes activator
T1657 113-116 CC denotes and
T1656 102-112 NN denotes transducer
T1655 95-101 NN denotes signal
T1654 92-94 IN denotes of
T1653 76-91 NN denotes phosphorylation
T1652 72-75 DT denotes The
T1651 70-71 . denotes .
T1650 61-70 VBN denotes increased
T1649 57-60 VBD denotes was
T1648 48-56 NN denotes receptor
T1647 42-47 NN denotes IL-10
T1646 40-41 CD denotes 1
T1645 35-39 NN denotes type
T1644 31-34 DT denotes the
T1643 28-30 IN denotes of
T1642 17-27 NN denotes expression
T1641 9-16 NN denotes surface
T1640 3-8 PRP$ denotes their
R413 T1640 T1642 poss their,expression
R414 T1641 T1642 compound surface,expression
R415 T1642 T1650 nsubjpass expression,increased
R416 T1643 T1642 prep of,expression
R417 T1644 T1645 det the,type
R418 T1645 T1648 nmod type,receptor
R419 T1646 T1647 nummod 1,IL-10
R420 T1647 T1648 compound IL-10,receptor
R421 T1648 T1643 pobj receptor,of
R422 T1649 T1650 auxpass was,increased
R425 T1652 T1653 det The,phosphorylation
R426 T1653 T1663 nsubjpass phosphorylation,sustained
R427 T1654 T1653 prep of,phosphorylation
R428 T1655 T1656 compound signal,transducer
R429 T1656 T1654 pobj transducer,of
R430 T1657 T1656 cc and,transducer
R431 T1658 T1656 conj activator,transducer
R432 T1659 T1658 prep of,activator
R433 T1660 T1659 pobj transcription,of
R434 T1661 T1660 nummod 3,transcription
R435 T1662 T1663 auxpass was,sustained
R436 T1663 T1663 ROOT sustained,sustained
R437 T1664 T1663 prep in,sustained
R438 T1665 T1666 det both,blood
R439 T1666 T1673 nmod blood,cells
R440 T1667 T1666 cc and,blood
R441 T1668 T1669 amod synovial,tissue
R442 T1669 T1666 conj tissue,blood
R443 T1670 T1673 compound CD4,cells
R444 T1671 T1673 compound +,cells
R445 T1672 T1673 compound T,cells
R446 T1673 T1664 pobj cells,in
R447 T1674 T1673 prep of,cells
R448 T1675 T1674 pobj RA,of
R449 T1676 T1663 punct ",",sustained
R450 T1677 T1663 cc but,sustained
R451 T1678 T1681 nsubjpass it,augmented
R452 T1679 T1681 auxpass was,augmented
R453 T1680 T1681 neg not,augmented
R454 T1681 T1663 conj augmented,sustained
R455 T1682 T1681 agent by,augmented
R456 T1683 T1684 det the,presence
R457 T1684 T1682 pobj presence,by
R458 T1685 T1684 prep of,presence
R459 T1686 T1688 nummod 1,IL-10
R460 T1687 T1688 compound ng/ml,IL-10
R461 T1688 T1685 pobj IL-10,of
R462 T1689 T1681 punct .,augmented

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1102 35-56 Protein denotes type 1 IL-10 receptor
T1106 17-27 Gene_expression denotes expression
T1107 61-70 Positive_regulation denotes increased
R658 T1102 T1106 themeOf type 1 IL-10 receptor,expression
R659 T1106 T1107 themeOf expression,increased

testone

Id Subject Object Predicate Lexical cue
T68 229-238 Positive_regulation denotes augmented
T67 61-70 Positive_regulation denotes increased
T66 17-27 Gene_expression denotes expression
T46 266-271 Protein denotes IL-10
T45 194-197 Protein denotes CD4
T44 95-145 Protein denotes signal transducer and activator of transcription 3
T43 35-56 Protein denotes type 1 IL-10 receptor
R5 T43 T66 themeOf type 1 IL-10 receptor,expression
R6 T46 T68 causeOf IL-10,augmented
R13 T66 T67 themeOf expression,increased