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PMC:1064873 / 5601-5867 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T2227 105-109 Protein denotes CD4+
T2226 33-37 Protein denotes CD86
T2225 24-28 Protein denotes CD80
T2224 10-14 Protein denotes CD28

2_test

Id Subject Object Predicate Lexical cue
15535835-8624620-4156879 59-61 8624620 denotes 18
15535835-8546719-4156879 59-61 8546719 denotes 18
15535835-10529123-4156879 59-61 10529123 denotes 18

biosemtest

Id Subject Object Predicate Lexical cue
T3108 256-265 UMLS/C0037083 denotes ling by m
T3097 29-33 UMLS/C1366561 denotes and
T3085 15-19 UMLS/C0075747 denotes liga
T3071 38-42 UMLS/C0527903 denotes in
T3066 151-154 UMLS/C0454788 denotes e c
T2977 38-42 UMLS/C1413243 denotes in
T2942 51-59 UMLS/C0333348 denotes med ST [
T2922 76-86 UMLS/C0549178 denotes nuing emer
T2915 15-19 UMLS/C1332709 denotes liga
T2898 151-154 UMLS/C0337876 denotes e c
T2814 223-234 UMLS/C1546634 denotes blasts thro
T2790 198-209 UMLS/C1550652 denotes phages and
T2777 143-149 UMLS/C1554106 denotes r, may
T2766 223-234 UMLS/C1550637 denotes blasts thro
T2739 136-139 UMLS/C0205388 denotes n n
T3198 15-19 UMLS/C1426202 denotes liga
T3196 198-209 UMLS/C0024432 denotes phages and
T3183 214-222 UMLS/C1550315 denotes ial fibr
T3161 169-179 UMLS/C0443318 denotes ining the
T3144 143-149 UMLS/C0449788 denotes r, may
T3123 115-122 UMLS/C0039194 denotes ls, eve
T2643 184-194 UMLS/C1879547 denotes ation of m
T2642 100-109 UMLS/C1879547 denotes ated CD4+
T2891 243-255 UMLS/C0699040 denotes surface sign
T2875 124-128 UMLS/C0587117 denotes thou
T2874 143-149 UMLS/C0237753 denotes r, may
T2858 256-265 UMLS/C1710082 denotes ling by m
T2853 20-27 UMLS/C1749457 denotes ds, CD8
T2850 29-33 UMLS/C0104998 denotes and
T2849 223-234 UMLS/C0016030 denotes blasts thro
T2510 143-149 UMLS/C1709287 denotes r, may
T2500 20-27 UMLS/C0023688 denotes ds, CD8
T2617 198-209 UMLS/C1546706 denotes phages and

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4615 261-263 IN denotes by
T4614 251-260 NN denotes signaling
T4613 243-250 NN denotes surface
T4612 238-242 NN denotes cell
T4611 230-237 IN denotes through
T4610 218-229 NN denotes fibroblasts
T4609 209-217 JJ denotes synovial
T4608 205-208 CC denotes and
T4607 193-204 NN denotes macrophages
T4606 190-192 IN denotes of
T4605 179-189 NN denotes activation
T4604 175-178 DT denotes the
T4603 164-174 VB denotes sustaining
T4602 161-163 IN denotes in
T4601 153-160 JJ denotes crucial
T4600 150-152 VB denotes be
T4599 146-149 MD denotes may
T4598 144-145 -COMMA- denotes ,
T4597 138-144 NN denotes number
T4596 135-137 IN denotes in
T4595 131-134 JJ denotes few
T4594 124-130 IN denotes though
T4593 119-123 RB denotes even
T4592 117-118 -COMMA- denotes ,
T4591 112-117 NN denotes cells
T4590 110-111 NN denotes T
T4589 105-109 JJ denotes CD4+
T4588 95-104 VB denotes activated
T4587 92-94 IN denotes of
T4586 82-91 NN denotes emergence
T4585 71-81 VB denotes continuing
T4584 67-70 DT denotes The
T4583 64-65 -RRB- denotes ]
T4582 59-64 CD denotes 18-20
T4581 58-59 -LRB- denotes [
T4580 55-57 NN denotes ST
T4579 46-54 JJ denotes inflamed
T4578 42-45 DT denotes the
T4577 39-41 IN denotes in
T4576 37-38 -COMMA- denotes ,
T4575 33-37 NN denotes CD86
T4574 29-32 CC denotes and
T4573 24-28 NN denotes CD80
T4572 22-23 -COMMA- denotes ,
T4571 15-22 NN denotes ligands
T4570 10-14 NN denotes CD28
T4569 5-9 DT denotes both
T4568 1-4 CC denotes and
R1628 T4571 T4568 arg2Of ligands,and
R1629 T4571 T4569 arg1Of ligands,both
R1630 T4571 T4570 arg1Of ligands,CD28
R1631 T4571 T4572 arg1Of ligands,","
R1632 T4573 T4574 arg1Of CD80,and
R1634 T4574 T4572 arg2Of and,","
R1636 T4575 T4574 arg2Of CD86,and
R1639 T4580 T4577 arg2Of ST,in
R1640 T4580 T4578 arg1Of ST,the
R1641 T4580 T4579 arg1Of ST,inflamed
R1642 T4580 T4581 arg1Of ST,[
R1643 T4582 T4581 arg2Of 18-20,[
R1644 T4583 T4581 arg3Of ],[
R1647 T4586 T4584 arg1Of emergence,The
R1648 T4586 T4585 arg1Of emergence,continuing
R1649 T4586 T4587 arg1Of emergence,of
R1650 T4586 T4599 arg1Of emergence,may
R1651 T4586 T4600 arg1Of emergence,be
R1652 T4586 T4601 arg1Of emergence,crucial
R1653 T4591 T4587 arg2Of cells,of
R1654 T4591 T4588 arg2Of cells,activated
R1655 T4591 T4589 arg1Of cells,CD4+
R1656 T4591 T4590 arg1Of cells,T
R1658 T4594 T4593 arg1Of though,even
R1659 T4594 T4596 arg1Of though,in
R1661 T4595 T4594 arg2Of few,though
R1662 T4597 T4596 arg2Of number,in
R1665 T4600 T4592 arg1Of be,","
R1666 T4600 T4594 arg1Of be,though
R1667 T4600 T4598 arg1Of be,","
R1668 T4600 T4599 arg2Of be,may
R1669 T4601 T4600 arg2Of crucial,be
R1670 T4601 T4602 arg1Of crucial,in
R1671 T4603 T4602 arg2Of sustaining,in
R1673 T4605 T4603 arg2Of activation,sustaining
R1674 T4605 T4604 arg1Of activation,the
R1675 T4605 T4606 arg1Of activation,of
R1676 T4605 T4611 arg1Of activation,through
R1677 T4605 T4615 arg1Of activation,by
R1679 T4607 T4608 arg1Of macrophages,and
R1680 T4608 T4606 arg2Of and,of
R1683 T4610 T4608 arg2Of fibroblasts,and
R1684 T4610 T4609 arg1Of fibroblasts,synovial
R1686 T4614 T4611 arg2Of signaling,through
R1687 T4614 T4612 arg1Of signaling,cell
R1688 T4614 T4613 arg1Of signaling,surface

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3514 105-108 Protein denotes CD4
T3513 33-37 Protein denotes CD86
T3512 24-28 Protein denotes CD80
T3511 10-14 Protein denotes CD28

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3855 33-37 http://www.uniprot.org/uniprot/P42081 denotes CD86
T3853 24-28 http://www.uniprot.org/uniprot/P33681 denotes CD80
T3849 10-14 http://www.uniprot.org/uniprot/P10747 denotes CD28
T3844 105-108 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-BP

Id Subject Object Predicate Lexical cue
T3301 179-204 http://purl.obolibrary.org/obo/GO_0042116 denotes activation of macrophages
T3283 251-260 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

GO-CC

Id Subject Object Predicate Lexical cue
T3595 238-250 http://purl.obolibrary.org/obo/GO_0009986 denotes cell surface
T3584 238-242 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

simple1

Id Subject Object Predicate Lexical cue
T3917 105-108 Protein denotes CD4
T3916 33-37 Protein denotes CD86
T3915 24-28 Protein denotes CD80
T3914 10-14 Protein denotes CD28

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6427 105-108 Protein denotes CD4
T6426 33-37 Protein denotes CD86
T6425 24-28 Protein denotes CD80
T6424 10-14 Protein denotes CD28

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4865 105-108 Protein denotes CD4
T4864 33-37 Protein denotes CD86
T4863 24-28 Protein denotes CD80
T4862 10-14 Protein denotes CD28

DLUT931

Id Subject Object Predicate Lexical cue
T5877 105-108 Protein denotes CD4
T5876 33-37 Protein denotes CD86
T5875 24-28 Protein denotes CD80
T5874 10-14 Protein denotes CD28

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6245 42-65 Protein denotes the inflamed ST [18-20]
T6185 238-250 Entity denotes cell surface
T6170 10-14 Protein denotes CD28
T6214 5-22 Entity denotes both CD28 ligands
T6206 209-229 Entity denotes synovial fibroblasts
T6278 193-204 Entity denotes macrophages
T6254 33-37 Protein denotes CD86
T6314 24-28 Protein denotes CD80
T6300 95-117 Entity denotes activated CD4+ T cells

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5603 153-160 JJ denotes crucial
T5602 150-152 VB denotes be
T5601 146-149 MD denotes may
T5600 144-145 , denotes ,
T5599 138-144 NN denotes number
T5598 135-137 IN denotes in
T5597 131-134 JJ denotes few
T5596 124-130 IN denotes though
T5595 119-123 RB denotes even
T5594 117-118 , denotes ,
T5593 112-117 NNS denotes cells
T5592 110-111 NNP denotes T
T5591 108-109 CD denotes +
T5590 105-108 NNP denotes CD4
T5589 95-104 VBN denotes activated
T5588 92-94 IN denotes of
T5587 82-91 NN denotes emergence
T5586 71-81 VBG denotes continuing
T5585 67-70 DT denotes The
T5584 65-66 . denotes .
T5583 64-65 NNP denotes ]
T5582 59-64 CD denotes 18-20
T5581 58-59 NNP denotes [
T5580 55-57 NNP denotes ST
T5579 46-54 JJ denotes inflamed
T5578 42-45 DT denotes the
T5577 39-41 IN denotes in
T5576 37-38 , denotes ,
T5575 33-37 NNP denotes CD86
T5574 29-32 CC denotes and
T5573 24-28 NNP denotes CD80
T5572 22-23 , denotes ,
T5571 15-22 NNS denotes ligands
T5570 10-14 CD denotes CD28
T5569 5-9 DT denotes both
T5568 1-4 CC denotes and
T5617 261-263 IN denotes by
T5616 251-260 VBG denotes signaling
T5615 243-250 NN denotes surface
T5614 238-242 NN denotes cell
T5613 230-237 IN denotes through
T5612 218-229 NNS denotes fibroblasts
T5611 209-217 JJ denotes synovial
T5610 205-208 CC denotes and
T5609 193-204 NNS denotes macrophages
T5608 190-192 IN denotes of
T5607 179-189 NN denotes activation
T5606 175-178 DT denotes the
T5605 164-174 VBG denotes sustaining
T5604 161-163 IN denotes in
R2633 T5569 T5571 det both,ligands
R2634 T5604 T5602 prep in,be
R2635 T5570 T5571 nummod CD28,ligands
R2636 T5605 T5604 pcomp sustaining,in
R2638 T5572 T5571 punct ",",ligands
R2639 T5573 T5571 conj CD80,ligands
R2640 T5574 T5573 cc and,CD80
R2641 T5606 T5607 det the,activation
R2642 T5575 T5573 conj CD86,CD80
R2643 T5576 T5571 punct ",",ligands
R2645 T5607 T5605 dobj activation,sustaining
R2646 T5578 T5583 det the,]
R2647 T5579 T5583 amod inflamed,]
R2648 T5608 T5607 prep of,activation
R2649 T5580 T5581 compound ST,[
R2650 T5581 T5583 nmod [,]
R2651 T5609 T5608 pobj macrophages,of
R2652 T5582 T5583 nummod 18-20,]
R2653 T5583 T5577 pobj ],in
R2655 T5610 T5609 cc and,macrophages
R2656 T5585 T5587 det The,emergence
R2657 T5586 T5587 amod continuing,emergence
R2658 T5587 T5602 nsubj emergence,be
R2659 T5611 T5612 amod synovial,fibroblasts
R2660 T5588 T5587 prep of,emergence
R2661 T5589 T5593 amod activated,cells
R2662 T5612 T5609 conj fibroblasts,macrophages
R2663 T5590 T5593 compound CD4,cells
R2664 T5591 T5593 nummod +,cells
R2665 T5613 T5605 prep through,sustaining
R2666 T5592 T5593 compound T,cells
R2667 T5593 T5588 pobj cells,of
R2668 T5594 T5587 punct ",",emergence
R2669 T5614 T5615 compound cell,surface
R2670 T5595 T5597 advmod even,few
R2671 T5596 T5597 advmod though,few
R2672 T5597 T5602 advcl few,be
R2673 T5615 T5613 pobj surface,through
R2674 T5598 T5597 prep in,few
R2675 T5599 T5598 pobj number,in
R2676 T5600 T5602 punct ",",be
R2677 T5616 T5605 conj signaling,sustaining
R2678 T5601 T5602 aux may,be
R2679 T5602 T5602 ROOT be,be
R2680 T5603 T5602 acomp crucial,be
R2681 T5617 T5616 prep by,signaling

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3789 105-108 Protein denotes CD4
T3781 33-37 Protein denotes CD86
T3780 24-28 Protein denotes CD80
T3779 10-22 Protein denotes CD28 ligands

test3

Id Subject Object Predicate Lexical cue
T2397 105-108 Protein denotes CD4
T2396 33-37 Protein denotes CD86
T2395 24-28 Protein denotes CD80
T2394 10-14 Protein denotes CD28
T2309 105-108 Protein denotes CD4
T2308 33-37 Protein denotes CD86
T2307 24-28 Protein denotes CD80
T2306 10-14 Protein denotes CD28

testone

Id Subject Object Predicate Lexical cue
T2123 105-108 Protein denotes CD4
T2122 33-37 Protein denotes CD86
T2121 24-28 Protein denotes CD80
T2120 10-14 Protein denotes CD28