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PMC:1064873 / 5231-6476 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T2236 1217-1221 Protein denotes CD86
T2235 1208-1212 Protein denotes CD80
T2234 1093-1130 Protein denotes cytotoxic T-cell-associated antigen 4
T2233 865-882 Protein denotes rheumatoid factor
T2232 792-796 Protein denotes CD4+
T2231 753-756 Protein denotes IFN
T2230 735-751 Protein denotes interferon gamma
T2229 665-669 Protein denotes CD11
T2228 656-660 Protein denotes CD69
T2227 475-479 Protein denotes CD4+
T2226 403-407 Protein denotes CD86
T2225 394-398 Protein denotes CD80
T2224 380-384 Protein denotes CD28
T2223 348-370 Protein denotes MHC class II molecules
T2222 208-243 Protein denotes MHC class II antigens HLA-DRB1*0404
T2221 0-4 Protein denotes CD4+

2_test

Id Subject Object Predicate Lexical cue
15535835-2446635-4156877 304-306 2446635 denotes 16
15535835-7738179-4156878 307-309 7738179 denotes 17
15535835-8624620-4156879 429-431 8624620 denotes 18
15535835-8546719-4156879 429-431 8546719 denotes 18
15535835-10529123-4156879 429-431 10529123 denotes 18
15535835-12776222-4156880 771-773 12776222 denotes 21
15535835-11259725-4156881 774-776 11259725 denotes 22
15535835-14614165-4156882 1241-1243 14614165 denotes 23

biosemtest

Id Subject Object Predicate Lexical cue
T3112 740-756 UP/O35735 denotes feron gamma (IFN
T3111 1099-1108 UMLS/C0677881 denotes xic T-cel
T3108 626-635 UMLS/C0037083 denotes ling by m
T3107 110-119 UMLS/C0037083 denotes ling, in
T3104 740-756 UP/P63310 denotes feron gamma (IFN
T3099 871-888 UP/P04206 denotes toid factor and o
T3097 399-403 UMLS/C1366561 denotes and
T3092 948-952 UMLS/C1704326 denotes n RA
T3090 740-756 UP/Q1WM28 denotes feron gamma (IFN
T3086 1184-1188 UMLS/C0075747 denotes n T
T3085 385-389 UMLS/C0075747 denotes liga
T3084 82-86 UMLS/C0075747 denotes medi
T3074 740-756 UP/O73915 denotes feron gamma (IFN
T3073 740-756 UP/Q9YGB9 denotes feron gamma (IFN
T3072 1223-1227 UMLS/C0527903 denotes ith
T3071 408-412 UMLS/C0527903 denotes in
T3070 740-756 UP/P79154 denotes feron gamma (IFN
T3069 740-756 UP/P01579 denotes feron gamma (IFN
T3068 1003-1012 UMLS/C0087111 denotes ent of ac
T3066 521-524 UMLS/C0454788 denotes e c
T3065 18-21 UMLS/C0454788 denotes e a
T3064 740-756 UP/P42160 denotes feron gamma (IFN
T3063 181-190 UMLS/C1317973 denotes rted by t
T3062 670-674 UMLS/C0054942 denotes as
T3058 918-929 UMLS/C1948029 denotes ction. Thei
T3056 913-917 UMLS/C1266909 denotes estr
T3055 691-698 UMLS/C1963578 denotes se of p
T3054 740-756 UP/Q8MKF5 denotes feron gamma (IFN
T3053 639-644 UMLS/C0876919 denotes of c
T3051 817-826 UMLS/C1948023 denotes ate B-cel
T3048 740-756 UP/P28333 denotes feron gamma (IFN
T3037 871-888 UMLS/C0201660 denotes toid factor and o
T3035 913-917 UMLS/C1266908 denotes estr
T3034 770-775 UMLS/C0384648 denotes [21,2
T3030 272-294 UMLS/C0012655 denotes se susceptibility and
T3028 1160-1165 UMLS/C0332206 denotes the e
T3026 1023-1030 UMLS/C0012634 denotes e by se
T3024 918-929 UMLS/C1261381 denotes ction. Thei
T3011 1016-1022 UMLS/C1561511 denotes disea
T3010 1016-1022 UMLS/C1561512 denotes disea
T3009 1016-1022 UMLS/C1561513 denotes disea
T2996 973-981 UMLS/C0332185 denotes ly prove
T2985 679-683 UMLS/C0205170 denotes as t
T2984 770-775 UMLS/C1623218 denotes [21,2
T2981 1016-1022 UMLS/C0205177 denotes disea
T2979 740-756 UP/Q865X1 denotes feron gamma (IFN
T2978 1223-1227 UMLS/C1413243 denotes ith
T2977 408-412 UMLS/C1413243 denotes in
T2976 1016-1022 UMLS/C2347179 denotes disea
T2961 913-917 UMLS/C0262950 denotes estr
T2959 661-665 UMLS/C1413235 denotes and
T2955 904-912 UMLS/C0086597 denotes ed bone
T2954 87-95 UMLS/C0086597 denotes ted cost
T2946 1016-1022 UMLS/C1561510 denotes disea
T2945 1016-1022 UMLS/C1561509 denotes disea
T2943 1016-1022 UMLS/C1561508 denotes disea
T2942 421-429 UMLS/C0333348 denotes med ST [
T2940 1016-1022 UMLS/C1561507 denotes disea
T2939 992-1002 UMLS/C1272703 denotes sful treat
T2929 1016-1022 UMLS/C1547419 denotes disea
T2922 446-456 UMLS/C0549178 denotes nuing emer
T2919 770-775 UMLS/C1825592 denotes [21,2
T2916 1184-1188 UMLS/C1332709 denotes n T
T2915 385-389 UMLS/C1332709 denotes liga
T2914 82-86 UMLS/C1332709 denotes medi
T2908 639-644 UMLS/C2348143 denotes of c
T2906 740-756 UP/P01581 denotes feron gamma (IFN
T2905 1233-1237 UMLS/C1299351 denotes vidi
T2904 1127-1136 UP/Q26721 denotes n 4 (CD15
T2901 299-307 UMLS/C0439793 denotes ity [16,
T2900 1003-1012 UMLS/C1522326 denotes ent of ac
T2898 521-524 UMLS/C0337876 denotes e c
T2835 1044-1054 UMLS/C1628982 denotes tion of T-
T2830 740-756 UP/Q9TV67 denotes feron gamma (IFN
T2828 740-756 UP/O77763 denotes feron gamma (IFN
T2826 740-756 UP/O57571 denotes feron gamma (IFN
T2815 913-917 UMLS/C1550616 denotes estr
T2814 593-604 UMLS/C1546634 denotes blasts thro
T2810 1003-1012 UMLS/C1533734 denotes ent of ac
T2800 1127-1136 UP/P0C873 denotes n 4 (CD15
T2797 1156-1159 UMLS/C0006823 denotes ock
T2796 811-816 UMLS/C0006823 denotes stimu
T2794 1127-1136 UP/P31522 denotes n 4 (CD15
T2791 1127-1136 UP/B1JS09 denotes n 4 (CD15
T2790 568-579 UMLS/C1550652 denotes phages and
T2781 253-266 UMLS/C0968669 denotes RB1*0401 with
T2777 513-519 UMLS/C1554106 denotes r, may
T2766 593-604 UMLS/C1550637 denotes blasts thro
T2760 1233-1237 UMLS/C1522410 denotes vidi
T2758 740-756 UP/P49708 denotes feron gamma (IFN
T2756 740-756 UP/Q9QXX2 denotes feron gamma (IFN
T2754 1044-1054 UMLS/C0021467 denotes tion of T-
T2749 1044-1054 UMLS/C0021469 denotes tion of T-
T2740 740-756 UP/Q4ZH68 denotes feron gamma (IFN
T2739 506-509 UMLS/C0205388 denotes n n
T2737 65-76 UMLS/C2699427 denotes nction with
T2736 740-756 UP/A4PIZ9 denotes feron gamma (IFN
T2735 1016-1022 UMLS/C1553875 denotes disea
T2734 1099-1108 UMLS/C1511636 denotes xic T-cel
T2731 788-796 UMLS/C1883712 denotes on, CD4+
T2727 948-952 UMLS/C1705809 denotes n RA
T2721 948-952 UMLS/C1705812 denotes n RA
T2717 948-952 UMLS/C1705810 denotes n RA
T2714 948-952 UMLS/C1705811 denotes n RA
T2705 181-190 UMLS/C0183683 denotes rted by t
T2702 639-644 UMLS/C1704970 denotes of c
T2701 913-917 UMLS/C1546560 denotes estr
T2680 948-952 UMLS/C0035820 denotes n RA
T2675 1116-1126 UMLS/C1706221 denotes ated antig
T2669 235-243 UMLS/C0122040 denotes RB1*0404
T2659 740-756 UP/P42162 denotes feron gamma (IFN
T2658 913-917 UMLS/C0391978 denotes estr
T2656 339-349 UMLS/C0185117 denotes ssion of M
T3229 148-152 UMLS/C0323983 denotes auto
T3226 639-644 UMLS/C0444504 denotes of c
T3224 834-844 UMLS/C1548180 denotes tion of au
T3220 52-60 UMLS/C0003320 denotes ens, in
T3209 740-756 UP/Q62574 denotes feron gamma (IFN
T3199 1184-1188 UMLS/C1426202 denotes n T
T3198 385-389 UMLS/C1426202 denotes liga
T3197 82-86 UMLS/C1426202 denotes medi
T3196 568-579 UMLS/C0024432 denotes phages and
T3189 181-190 UMLS/C0344211 denotes rted by t
T3187 740-756 UP/P63311 denotes feron gamma (IFN
T3183 584-592 UMLS/C1550315 denotes ial fibr
T3180 691-698 UMLS/C0439180 denotes se of p
T3179 893-903 UMLS/C0029431 denotes last-media
T3178 691-698 UMLS/C0680255 denotes se of p
T3175 740-756 UP/P07353 denotes feron gamma (IFN
T3170 740-756 UP/Q647G2 denotes feron gamma (IFN
T3169 740-756 UP/Q865Y4 denotes feron gamma (IFN
T3167 1238-1245 UMLS/C1510996 denotes y [23].
T3166 740-756 UP/Q5CCK0 denotes feron gamma (IFN
T3164 740-756 UP/P28341 denotes feron gamma (IFN
T3161 539-549 UMLS/C0443318 denotes ining the
T3160 871-888 UMLS/C0035448 denotes toid factor and o
T3158 1156-1159 UMLS/C0344312 denotes ock
T3157 811-816 UMLS/C0344312 denotes stimu
T3145 959-968 UMLS/C0039103 denotes tis was r
T3144 513-519 UMLS/C0449788 denotes r, may
T3141 153-171 UMLS/C0443146 denotes mmune process has
T3133 172-175 UMLS/C2348947 denotes een
T3132 740-756 UP/Q25BC0 denotes feron gamma (IFN
T3130 740-756 UP/P01580 denotes feron gamma (IFN
T3126 1192-1199 UMLS/C0039194 denotes s by bi
T3125 1109-1115 UMLS/C0039194 denotes -assoc
T3124 803-810 UMLS/C0039194 denotes s could
T3123 485-492 UMLS/C0039194 denotes ls, eve
T3122 10-17 UMLS/C0039194 denotes ls may
T3118 1214-1218 UMLS/C1366561 denotes nd C
T2652 740-756 UP/P17773 denotes feron gamma (IFN
T2643 554-564 UMLS/C1879547 denotes ation of m
T2642 470-479 UMLS/C1879547 denotes ated CD4+
T2641 25-34 UMLS/C1879547 denotes ated by a
T2635 740-756 UP/O57608 denotes feron gamma (IFN
T2627 740-756 UP/O57603 denotes feron gamma (IFN
T2897 18-21 UMLS/C0337876 denotes e a
T2896 740-756 UP/Q7TSP4 denotes feron gamma (IFN
T2895 740-756 UP/Q8SPW9 denotes feron gamma (IFN
T2894 848-862 UMLS/C0004358 denotes tibodies such
T2893 1194-1210 UMLS/C0699040 denotes by binding to CD
T2892 648-660 UMLS/C0699040 denotes surface CD69
T2891 613-625 UMLS/C0699040 denotes surface sign
T2884 132-144 UMLS/C0237881 denotes ficance of t
T2882 1116-1126 UMLS/C0332281 denotes ated antig
T2878 740-756 UP/P63309 denotes feron gamma (IFN
T2875 494-498 UMLS/C0587117 denotes thou
T2874 513-519 UMLS/C0237753 denotes r, may
T2873 740-756 UP/P46402 denotes feron gamma (IFN
T2866 827-833 UMLS/C0004561 denotes produ
T2864 1233-1237 UMLS/C0205250 denotes vidi
T2860 871-888 UP/P04207 denotes toid factor and o
T2858 626-635 UMLS/C1710082 denotes ling by m
T2857 110-119 UMLS/C1710082 denotes ling, in
T2853 390-397 UMLS/C1749457 denotes ds, CD8
T2851 1214-1218 UMLS/C0104998 denotes nd C
T2850 399-403 UMLS/C0104998 denotes and
T2849 593-604 UMLS/C0016030 denotes blasts thro
T2844 235-243 UMLS/C1415576 denotes RB1*0404
T2842 1081-1095 UMLS/C0162768 denotes protein of cy
T2619 740-756 UP/Q2PE75 denotes feron gamma (IFN
T2573 740-756 UP/Q866Y6 denotes feron gamma (IFN
T2571 722-731 UMLS/C1524094 denotes ines such
T2560 1233-1237 UMLS/C1561957 denotes vidi
T2558 1233-1237 UMLS/C1561958 denotes vidi
T2551 740-756 UP/Q5I6S9 denotes feron gamma (IFN
T2548 740-756 UP/Q865W6 denotes feron gamma (IFN
T2547 770-775 UMLS/C1522571 denotes [21,2
T2544 740-756 UP/P17803 denotes feron gamma (IFN
T2528 740-756 UMLS/C0021740 denotes feron gamma (IFN
T2526 353-375 UMLS/C0019630 denotes lass II molecules and
T2525 213-234 UMLS/C0019630 denotes lass II antigens HLA-
T2524 740-756 UMLS/C0021745 denotes feron gamma (IFN
T2523 740-756 UP/Q9TTB0 denotes feron gamma (IFN
T2519 339-349 UMLS/C0017262 denotes ssion of M
T2513 1160-1165 UMLS/C1706084 denotes the e
T2510 513-519 UMLS/C1709287 denotes r, may
T2508 661-665 UMLS/C0108800 denotes and
T2507 1058-1075 UMLS/C1155065 denotes activation with
T2504 1003-1012 UMLS/C1705169 denotes ent of ac
T2502 1160-1165 UMLS/C1533157 denotes the e
T2500 390-397 UMLS/C0023688 denotes ds, CD8
T2486 740-756 UP/P30123 denotes feron gamma (IFN
T2485 740-756 UP/O35497 denotes feron gamma (IFN
T2484 691-698 UMLS/C1283071 denotes se of p
T2483 982-988 UMLS/C0700164 denotes by su
T2480 1003-1012 UMLS/C0039798 denotes ent of ac
T2473 1211-1213 UMLS/C0319022 denotes 0
T2467 904-912 UMLS/C0127400 denotes ed bone
T2466 87-95 UMLS/C0127400 denotes ted cost
T2463 1160-1165 UMLS/C0028778 denotes the e
T2460 740-756 UP/P42161 denotes feron gamma (IFN
T2456 1160-1165 UMLS/C0233660 denotes the e
T2454 1170-1180 UMLS/C0425152 denotes ment of CD
T2452 982-988 UMLS/C0456369 denotes by su
T2448 1116-1126 UMLS/C0750490 denotes ated antig
T2447 639-644 UMLS/C2347634 denotes of c
T2446 132-144 UMLS/C0750502 denotes ficance of t
T2445 691-698 UMLS/C0391871 denotes se of p
T2443 722-731 UMLS/C0079189 denotes ines such
T2430 181-190 UMLS/C1521721 denotes rted by t
T2617 568-579 UMLS/C1546706 denotes phages and

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4721 1243-1244 -RRB- denotes ]
T4720 1241-1243 CD denotes 23
T4719 1240-1241 -LRB- denotes [
T4718 1232-1239 NN denotes avidity
T4717 1227-1231 JJ denotes high
T4716 1222-1226 IN denotes with
T4715 1217-1221 NN denotes CD86
T4714 1213-1216 CC denotes and
T4713 1208-1212 NN denotes CD80
T4712 1205-1207 TO denotes to
T4711 1197-1204 VB denotes binding
T4710 1194-1196 IN denotes by
T4709 1188-1193 NN denotes cells
T4708 1186-1187 NN denotes T
T4707 1183-1185 IN denotes on
T4706 1178-1182 NN denotes CD28
T4705 1175-1177 IN denotes of
T4704 1164-1174 NN denotes engagement
T4703 1160-1163 DT denotes the
T4702 1154-1159 VB denotes block
T4701 1150-1153 MD denotes can
T4700 1144-1149 WDT denotes which
T4699 1142-1143 -COMMA- denotes ,
T4698 1138-1142 NN denotes -IgG
T4697 1137-1138 -RRB- denotes )
T4696 1132-1137 NN denotes CD152
T4695 1131-1132 -LRB- denotes (
T4694 1129-1130 CD denotes 4
T4693 1121-1128 NN denotes antigen
T4692 1103-1120 JJ denotes T-cell-associated
T4691 1093-1102 JJ denotes cytotoxic
T4690 1090-1092 IN denotes of
T4689 1082-1089 NN denotes protein
T4688 1075-1081 NN denotes fusion
T4687 1070-1074 IN denotes with
T4686 1059-1069 NN denotes activation
T4685 1052-1058 NN denotes T-cell
T4684 1049-1051 IN denotes of
T4683 1038-1048 NN denotes inhibition
T4682 1028-1037 JJ denotes selective
T4681 1025-1027 IN denotes by
T4680 1017-1024 NN denotes disease
T4679 1010-1016 JJ denotes active
T4678 1007-1009 IN denotes of
T4677 997-1006 NN denotes treatment
T4676 986-996 JJ denotes successful
T4675 983-985 IN denotes by
T4674 976-982 VB denotes proved
T4673 967-975 RB denotes recently
T4672 963-966 VB denotes was
T4671 953-962 NN denotes synovitis
T4670 950-952 NN denotes RA
T4669 947-949 IN denotes in
T4668 942-946 NN denotes role
T4667 931-941 JJ denotes obligatory
T4666 925-930 PRP-DOLLAR- denotes Their
T4665 912-923 NN denotes destruction
T4664 907-911 NN denotes bone
T4663 887-906 JJ denotes osteoclast-mediated
T4662 883-886 CC denotes and
T4661 876-882 NN denotes factor
T4660 865-875 JJ denotes rheumatoid
T4659 862-864 IN denotes as
T4658 857-861 JJ denotes such
T4657 842-856 NN denotes autoantibodies
T4656 839-841 IN denotes of
T4655 828-838 NN denotes production
T4654 821-827 NN denotes B-cell
T4653 811-820 VB denotes stimulate
T4652 805-810 MD denotes could
T4651 799-804 NN denotes cells
T4650 797-798 NN denotes T
T4649 792-796 JJ denotes CD4+
T4648 790-791 -COMMA- denotes ,
T4647 782-790 NN denotes addition
T4646 779-781 IN denotes In
T4645 776-777 -RRB- denotes ]
T4644 771-776 CD denotes 21,22
T4643 770-771 -LRB- denotes [
T4642 764-769 NN denotes IL-17
T4641 760-763 CC denotes and
T4640 757-759 NN denotes
T4639 756-757 -RRB- denotes )
T4638 753-756 NN denotes IFN
T4637 752-753 -LRB- denotes (
T4636 746-751 NN denotes gamma
T4635 735-745 NN denotes interferon
T4634 732-734 IN denotes as
T4633 727-731 JJ denotes such
T4632 717-726 NN denotes cytokines
T4631 713-716 NN denotes Th1
T4630 697-712 JJ denotes proinflammatory
T4629 694-696 IN denotes of
T4628 686-693 NN denotes release
T4627 682-685 DT denotes the
T4626 679-681 IN denotes as
T4625 674-678 RB denotes well
T4624 671-673 RB denotes as
T4623 669-670 -COMMA- denotes ,
T4622 665-669 NN denotes CD11
T4621 661-664 CC denotes and
T4620 656-660 NN denotes CD69
T4619 648-655 NN denotes surface
T4618 643-647 NN denotes cell
T4617 640-642 IN denotes of
T4616 634-639 NN denotes means
T4615 631-633 IN denotes by
T4614 621-630 NN denotes signaling
T4613 613-620 NN denotes surface
T4612 608-612 NN denotes cell
T4611 600-607 IN denotes through
T4610 588-599 NN denotes fibroblasts
T4609 579-587 JJ denotes synovial
T4608 575-578 CC denotes and
T4607 563-574 NN denotes macrophages
T4606 560-562 IN denotes of
T4605 549-559 NN denotes activation
T4604 545-548 DT denotes the
T4603 534-544 VB denotes sustaining
T4602 531-533 IN denotes in
T4601 523-530 JJ denotes crucial
T4600 520-522 VB denotes be
T4599 516-519 MD denotes may
T4598 514-515 -COMMA- denotes ,
T4597 508-514 NN denotes number
T4596 505-507 IN denotes in
T4595 501-504 JJ denotes few
T4594 494-500 IN denotes though
T4593 489-493 RB denotes even
T4592 487-488 -COMMA- denotes ,
T4591 482-487 NN denotes cells
T4590 480-481 NN denotes T
T4589 475-479 JJ denotes CD4+
T4588 465-474 VB denotes activated
T4587 462-464 IN denotes of
T4586 452-461 NN denotes emergence
T4585 441-451 VB denotes continuing
T4584 437-440 DT denotes The
T4583 434-435 -RRB- denotes ]
T4582 429-434 CD denotes 18-20
T4581 428-429 -LRB- denotes [
T4580 425-427 NN denotes ST
T4579 416-424 JJ denotes inflamed
T4578 412-415 DT denotes the
T4577 409-411 IN denotes in
T4576 407-408 -COMMA- denotes ,
T4575 403-407 NN denotes CD86
T4574 399-402 CC denotes and
T4573 394-398 NN denotes CD80
T4572 392-393 -COMMA- denotes ,
T4571 385-392 NN denotes ligands
T4570 380-384 NN denotes CD28
T4569 375-379 DT denotes both
T4568 371-374 CC denotes and
T4567 361-370 NN denotes molecules
T4566 358-360 CD denotes II
T4565 352-357 NN denotes class
T4564 348-351 NN denotes MHC
T4563 345-347 IN denotes of
T4562 334-344 NN denotes expression
T4561 323-333 JJ denotes high-level
T4560 319-322 DT denotes the
T4559 316-318 IN denotes by
T4558 312-315 CC denotes and
T4557 310-311 -COMMA- denotes ,
T4556 309-310 -RRB- denotes ]
T4555 304-309 CD denotes 16,17
T4554 303-304 -LRB- denotes [
T4553 294-302 NN denotes severity
T4552 290-293 CC denotes and
T4551 275-289 NN denotes susceptibility
T4550 267-274 NN denotes disease
T4549 262-266 IN denotes with
T4548 248-261 NN denotes HLA-DRB1*0401
T4547 244-247 CC denotes and
T4546 230-243 NN denotes HLA-DRB1*0404
T4545 221-229 NN denotes antigens
T4544 218-220 CD denotes II
T4543 212-217 NN denotes class
T4542 208-211 NN denotes MHC
T4541 204-207 DT denotes the
T4540 201-203 IN denotes of
T4539 193-200 NN denotes linkage
T4538 189-192 DT denotes the
T4537 186-188 IN denotes by
T4536 176-185 VB denotes supported
T4535 171-175 VB denotes been
T4534 167-170 VB denotes has
T4533 159-166 NN denotes process
T4532 148-158 JJ denotes autoimmune
T4531 143-147 DT denotes this
T4530 140-142 IN denotes of
T4529 127-139 NN denotes significance
T4528 123-126 DT denotes The
T4527 119-121 NN denotes RA
T4526 116-118 IN denotes in
T4525 114-115 -COMMA- denotes ,
T4524 105-114 NN denotes signaling
T4523 91-104 JJ denotes costimulatory
T4522 77-90 JJ denotes CD28-mediated
T4521 72-76 IN denotes with
T4520 60-71 NN denotes conjunction
T4519 57-59 IN denotes in
T4518 55-56 -COMMA- denotes ,
T4517 47-55 NN denotes antigens
T4516 33-46 JJ denotes arthritogenic
T4515 30-32 IN denotes by
T4514 20-29 VB denotes activated
T4513 17-19 VB denotes be
T4512 13-16 MD denotes may
T4511 7-12 NN denotes cells
T4510 5-6 NN denotes T
T4509 0-4 JJ denotes CD4+
R1540 T4511 T4509 arg1Of cells,CD4+
R1541 T4511 T4510 arg1Of cells,T
R1542 T4511 T4512 arg1Of cells,may
R1543 T4511 T4513 arg1Of cells,be
R1544 T4511 T4514 arg2Of cells,activated
R1546 T4514 T4512 arg2Of activated,may
R1547 T4514 T4513 arg2Of activated,be
R1548 T4514 T4515 arg1Of activated,by
R1549 T4514 T4518 arg1Of activated,","
R1550 T4514 T4519 arg1Of activated,in
R1551 T4514 T4525 arg1Of activated,","
R1552 T4514 T4526 arg1Of activated,in
R1554 T4517 T4515 arg2Of antigens,by
R1555 T4517 T4516 arg1Of antigens,arthritogenic
R1557 T4520 T4519 arg2Of conjunction,in
R1558 T4520 T4521 arg1Of conjunction,with
R1561 T4524 T4521 arg2Of signaling,with
R1562 T4524 T4522 arg1Of signaling,CD28-mediated
R1563 T4524 T4523 arg1Of signaling,costimulatory
R1564 T4527 T4526 arg2Of RA,in
R1565 T4529 T4528 arg1Of significance,The
R1566 T4529 T4530 arg1Of significance,of
R1567 T4529 T4534 arg1Of significance,has
R1568 T4529 T4535 arg1Of significance,been
R1569 T4529 T4536 arg2Of significance,supported
R1570 T4533 T4530 arg2Of process,of
R1571 T4533 T4531 arg1Of process,this
R1572 T4533 T4532 arg1Of process,autoimmune
R1576 T4536 T4534 arg2Of supported,has
R1578 T4536 T4535 arg2Of supported,been
R1579 T4536 T4576 arg1Of supported,","
R1580 T4536 T4577 arg1Of supported,in
R1583 T4539 T4538 arg1Of linkage,the
R1584 T4539 T4540 arg1Of linkage,of
R1585 T4539 T4549 arg1Of linkage,with
R1586 T4539 T4559 arg1Of linkage,by
R1587 T4539 T4568 arg1Of linkage,and
R1591 T4545 T4542 arg1Of antigens,MHC
R1592 T4545 T4543 arg1Of antigens,class
R1593 T4545 T4544 arg1Of antigens,II
R1594 T4546 T4547 arg1Of HLA-DRB1*0404,and
R1595 T4547 T4540 arg2Of and,of
R1596 T4547 T4541 arg1Of and,the
R1597 T4547 T4545 arg1Of and,antigens
R1598 T4548 T4547 arg2Of HLA-DRB1*0401,and
R1600 T4549 T4558 arg1Of with,and
R1602 T4551 T4550 arg1Of susceptibility,disease
R1603 T4551 T4552 arg1Of susceptibility,and
R1604 T4552 T4549 arg2Of and,with
R1605 T4553 T4552 arg2Of severity,and
R1606 T4553 T4554 arg1Of severity,[
R1607 T4555 T4554 arg2Of "16,17",[
R1609 T4556 T4554 arg3Of ],[
R1612 T4558 T4557 arg1Of and,","
R1613 T4559 T4558 arg2Of by,and
R1614 T4562 T4559 arg2Of expression,by
R1615 T4562 T4560 arg1Of expression,the
R1616 T4562 T4561 arg1Of expression,high-level
R1617 T4562 T4563 arg1Of expression,of
R1620 T4567 T4563 arg2Of molecules,of
R1621 T4567 T4564 arg1Of molecules,MHC
R1622 T4567 T4565 arg1Of molecules,class
R1623 T4567 T4566 arg1Of molecules,II
R1624 T4568 T4536 arg1Of and,supported
R1625 T4568 T4537 arg2Of and,by
R1628 T4571 T4568 arg2Of ligands,and
R1629 T4571 T4569 arg1Of ligands,both
R1630 T4571 T4570 arg1Of ligands,CD28
R1631 T4571 T4572 arg1Of ligands,","
R1632 T4573 T4574 arg1Of CD80,and
R1634 T4574 T4572 arg2Of and,","
R1636 T4575 T4574 arg2Of CD86,and
R1639 T4580 T4577 arg2Of ST,in
R1640 T4580 T4578 arg1Of ST,the
R1641 T4580 T4579 arg1Of ST,inflamed
R1642 T4580 T4581 arg1Of ST,[
R1643 T4582 T4581 arg2Of 18-20,[
R1644 T4583 T4581 arg3Of ],[
R1647 T4586 T4584 arg1Of emergence,The
R1648 T4586 T4585 arg1Of emergence,continuing
R1649 T4586 T4587 arg1Of emergence,of
R1650 T4586 T4599 arg1Of emergence,may
R1651 T4586 T4600 arg1Of emergence,be
R1652 T4586 T4601 arg1Of emergence,crucial
R1653 T4591 T4587 arg2Of cells,of
R1654 T4591 T4588 arg2Of cells,activated
R1655 T4591 T4589 arg1Of cells,CD4+
R1656 T4591 T4590 arg1Of cells,T
R1658 T4594 T4593 arg1Of though,even
R1659 T4594 T4596 arg1Of though,in
R1661 T4595 T4594 arg2Of few,though
R1662 T4597 T4596 arg2Of number,in
R1665 T4600 T4592 arg1Of be,","
R1666 T4600 T4594 arg1Of be,though
R1667 T4600 T4598 arg1Of be,","
R1668 T4600 T4599 arg2Of be,may
R1669 T4601 T4600 arg2Of crucial,be
R1670 T4601 T4602 arg1Of crucial,in
R1671 T4603 T4602 arg2Of sustaining,in
R1673 T4605 T4603 arg2Of activation,sustaining
R1674 T4605 T4604 arg1Of activation,the
R1675 T4605 T4606 arg1Of activation,of
R1676 T4605 T4611 arg1Of activation,through
R1677 T4605 T4615 arg1Of activation,by
R1679 T4607 T4608 arg1Of macrophages,and
R1680 T4608 T4606 arg2Of and,of
R1683 T4610 T4608 arg2Of fibroblasts,and
R1684 T4610 T4609 arg1Of fibroblasts,synovial
R1686 T4614 T4611 arg2Of signaling,through
R1687 T4614 T4612 arg1Of signaling,cell
R1688 T4614 T4613 arg1Of signaling,surface
R1690 T4616 T4617 arg1Of means,of
R1691 T4616 T4626 arg1Of means,as
R1693 T4620 T4618 arg1Of CD69,cell
R1694 T4620 T4619 arg1Of CD69,surface
R1695 T4620 T4621 arg1Of CD69,and
R1696 T4621 T4617 arg2Of and,of
R1697 T4622 T4621 arg2Of CD11,and
R1701 T4626 T4615 arg2Of as,by
R1702 T4626 T4623 arg1Of as,","
R1703 T4626 T4624 arg1Of as,as
R1704 T4626 T4625 arg1Of as,well
R1706 T4628 T4626 arg2Of release,as
R1707 T4628 T4627 arg1Of release,the
R1708 T4628 T4629 arg1Of release,of
R1712 T4632 T4629 arg2Of cytokines,of
R1713 T4632 T4630 arg1Of cytokines,proinflammatory
R1714 T4632 T4631 arg1Of cytokines,Th1
R1715 T4632 T4634 arg1Of cytokines,as
R1717 T4634 T4633 arg1Of as,such
R1720 T4636 T4635 arg1Of gamma,interferon
R1721 T4636 T4637 arg1Of gamma,(
R1722 T4638 T4637 arg2Of IFN,(
R1723 T4639 T4637 arg3Of ),(
R1724 T4640 T4636 arg1Of -γ,gamma
R1725 T4640 T4641 arg1Of -γ,and
R1726 T4641 T4634 arg2Of and,as
R1727 T4642 T4641 arg2Of IL-17,and
R1729 T4642 T4643 arg1Of IL-17,[
R1730 T4644 T4643 arg2Of "21,22",[
R1731 T4645 T4643 arg3Of ],[
R1734 T4647 T4646 arg2Of addition,In
R1736 T4651 T4649 arg1Of cells,CD4+
R1737 T4651 T4650 arg1Of cells,T
R1738 T4651 T4652 arg1Of cells,could
R1739 T4651 T4653 arg1Of cells,stimulate
R1740 T4653 T4646 arg1Of stimulate,In
R1741 T4653 T4648 arg1Of stimulate,","
R1742 T4653 T4652 arg2Of stimulate,could
R1744 T4655 T4653 arg2Of production,stimulate
R1745 T4655 T4654 arg1Of production,B-cell
R1746 T4655 T4656 arg1Of production,of
R1747 T4657 T4656 arg2Of autoantibodies,of
R1748 T4657 T4659 arg1Of autoantibodies,as
R1749 T4659 T4658 arg1Of as,such
R1751 T4661 T4660 arg1Of factor,rheumatoid
R1752 T4661 T4662 arg1Of factor,and
R1754 T4662 T4659 arg2Of and,as
R1758 T4665 T4662 arg2Of destruction,and
R1759 T4665 T4663 arg1Of destruction,osteoclast-mediated
R1760 T4665 T4664 arg1Of destruction,bone
R1762 T4668 T4666 arg1Of role,Their
R1763 T4668 T4667 arg1Of role,obligatory
R1764 T4668 T4669 arg1Of role,in
R1765 T4668 T4672 arg1Of role,was
R1766 T4668 T4674 arg2Of role,proved
R1767 T4671 T4669 arg2Of synovitis,in
R1768 T4671 T4670 arg1Of synovitis,RA
R1770 T4674 T4672 arg2Of proved,was
R1771 T4674 T4673 arg1Of proved,recently
R1772 T4674 T4675 arg1Of proved,by
R1773 T4677 T4675 arg2Of treatment,by
R1774 T4677 T4676 arg1Of treatment,successful
R1775 T4677 T4678 arg1Of treatment,of
R1777 T4680 T4678 arg2Of disease,of
R1778 T4680 T4679 arg1Of disease,active
R1781 T4683 T4674 arg1Of inhibition,proved
R1782 T4683 T4681 arg2Of inhibition,by
R1783 T4683 T4682 arg1Of inhibition,selective
R1784 T4683 T4684 arg1Of inhibition,of
R1785 T4683 T4687 arg1Of inhibition,with
R1786 T4686 T4684 arg2Of activation,of
R1787 T4686 T4685 arg1Of activation,T-cell
R1789 T4689 T4687 arg2Of protein,with
R1790 T4689 T4688 arg1Of protein,fusion
R1791 T4689 T4690 arg1Of protein,of
R1792 T4689 T4699 arg1Of protein,","
R1793 T4689 T4700 arg1Of protein,which
R1794 T4689 T4701 arg1Of protein,can
R1795 T4689 T4702 arg1Of protein,block
R1797 T4689 T4711 arg1Of protein,binding
R1801 T4696 T4695 arg2Of CD152,(
R1802 T4697 T4695 arg3Of ),(
R1803 T4698 T4690 arg2Of -IgG,of
R1804 T4698 T4691 arg1Of -IgG,cytotoxic
R1805 T4698 T4692 arg1Of -IgG,T-cell-associated
R1806 T4698 T4693 arg1Of -IgG,antigen
R1807 T4698 T4694 arg1Of -IgG,4
R1808 T4698 T4695 arg1Of -IgG,(
R1810 T4702 T4701 arg2Of block,can
R1811 T4702 T4710 arg1Of block,by
R1812 T4702 T4719 arg1Of block,[
R1814 T4704 T4702 arg2Of engagement,block
R1815 T4704 T4703 arg1Of engagement,the
R1816 T4704 T4705 arg1Of engagement,of
R1817 T4704 T4707 arg1Of engagement,on
R1818 T4706 T4705 arg2Of CD28,of
R1819 T4709 T4707 arg2Of cells,on
R1820 T4709 T4708 arg1Of cells,T
R1822 T4711 T4710 arg2Of binding,by
R1823 T4711 T4712 arg1Of binding,to
R1824 T4713 T4714 arg1Of CD80,and
R1825 T4714 T4712 arg2Of and,to
R1826 T4714 T4716 arg1Of and,with
R1827 T4715 T4714 arg2Of CD86,and
R1831 T4718 T4716 arg2Of avidity,with
R1832 T4718 T4717 arg1Of avidity,high
R1834 T4720 T4719 arg2Of 23,[
R1835 T4721 T4719 arg3Of ],[

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T3461 764-769 Antecedent denotes IL-17
T3460 735-751 Antecedent denotes interferon gamma
T3459 697-726 Anaphor denotes proinflammatory Th1 cytokines
R944 T3459 T3460 boundBy proinflammatory Th1 cytokines,interferon gamma
R945 T3459 T3461 boundBy proinflammatory Th1 cytokines,IL-17

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3520 792-795 Protein denotes CD4
T3519 764-769 Protein denotes IL-17
T3518 752-759 Protein denotes (IFN)-γ
T3517 735-751 Protein denotes interferon gamma
T3516 665-669 Protein denotes CD11
T3515 656-660 Protein denotes CD69
T3514 475-478 Protein denotes CD4
T3513 403-407 Protein denotes CD86
T3512 394-398 Protein denotes CD80
T3511 380-384 Protein denotes CD28
T3510 248-261 Protein denotes HLA-DRB1*0401
T3509 230-243 Protein denotes HLA-DRB1*0404
T3524 1217-1221 Protein denotes CD86
T3523 1208-1212 Protein denotes CD80
T3522 1178-1182 Protein denotes CD28
T3521 1093-1142 Protein denotes cytotoxic T-cell-associated antigen 4 (CD152)-IgG
T3508 77-81 Protein denotes CD28
T3507 0-3 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3859 764-769 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T3857 746-756 http://www.uniprot.org/uniprot/P01579 denotes gamma (IFN
T3856 1217-1221 http://www.uniprot.org/uniprot/P42081 denotes CD86
T3855 403-407 http://www.uniprot.org/uniprot/P42081 denotes CD86
T3854 1208-1212 http://www.uniprot.org/uniprot/P33681 denotes CD80
T3853 394-398 http://www.uniprot.org/uniprot/P33681 denotes CD80
T3850 1178-1182 http://www.uniprot.org/uniprot/P10747 denotes CD28
T3849 380-384 http://www.uniprot.org/uniprot/P10747 denotes CD28
T3848 77-81 http://www.uniprot.org/uniprot/P10747 denotes CD28
T3845 792-795 http://www.uniprot.org/uniprot/P01730 denotes CD4
T3844 475-478 http://www.uniprot.org/uniprot/P01730 denotes CD4
T3843 0-3 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-BP

Id Subject Object Predicate Lexical cue
T3308 1054-1069 http://purl.obolibrary.org/obo/GO_0001775 denotes cell activation
T3307 1052-1069 http://purl.obolibrary.org/obo/GO_1903905 denotes T-cell activation
T3306 1052-1069 http://purl.obolibrary.org/obo/GO_0050863 denotes T-cell activation
T3305 1052-1069 http://purl.obolibrary.org/obo/GO_0050798 denotes T-cell activation
T3303 1052-1069 http://purl.obolibrary.org/obo/GO_0051132 denotes T-cell activation
T3302 821-838 http://purl.obolibrary.org/obo/GO_0002368 denotes B-cell production
T3301 549-574 http://purl.obolibrary.org/obo/GO_0042116 denotes activation of macrophages
T3283 621-630 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T3282 105-114 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T3304 1052-1069 http://purl.obolibrary.org/obo/GO_0042110 denotes T-cell activation

GO-CC

Id Subject Object Predicate Lexical cue
T3597 1105-1120 http://purl.obolibrary.org/obo/GO_0009986 denotes cell-associated
T3596 643-655 http://purl.obolibrary.org/obo/GO_0009986 denotes cell surface
T3595 608-620 http://purl.obolibrary.org/obo/GO_0009986 denotes cell surface
T3588 1105-1109 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3587 1054-1058 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3586 823-827 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3585 643-647 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3584 608-612 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

GO-MF

Id Subject Object Predicate Lexical cue
T3577 764-769 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T3576 735-751 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon gamma
T3561 1197-1204 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T3256 925-1245 Sentence denotes Their obligatory role in RA synovitis was recently proved by successful treatment of active disease by selective inhibition of T-cell activation with fusion protein of cytotoxic T-cell-associated antigen 4 (CD152)-IgG, which can block the engagement of CD28 on T cells by binding to CD80 and CD86 with high avidity [23].
T3255 779-924 Sentence denotes In addition, CD4+ T cells could stimulate B-cell production of autoantibodies such as rheumatoid factor and osteoclast-mediated bone destruction.
T3254 437-778 Sentence denotes The continuing emergence of activated CD4+ T cells, even though few in number, may be crucial in sustaining the activation of macrophages and synovial fibroblasts through cell surface signaling by means of cell surface CD69 and CD11, as well as the release of proinflammatory Th1 cytokines such as interferon gamma (IFN)-γ and IL-17 [21,22].
T3253 123-436 Sentence denotes The significance of this autoimmune process has been supported by the linkage of the MHC class II antigens HLA-DRB1*0404 and HLA-DRB1*0401 with disease susceptibility and severity [16,17], and by the high-level expression of MHC class II molecules and both CD28 ligands, CD80 and CD86, in the inflamed ST [18-20].
T3252 0-122 Sentence denotes CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA.
T29 0-122 Sentence denotes CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA.
T30 123-436 Sentence denotes The significance of this autoimmune process has been supported by the linkage of the MHC class II antigens HLA-DRB1*0404 and HLA-DRB1*0401 with disease susceptibility and severity [16,17], and by the high-level expression of MHC class II molecules and both CD28 ligands, CD80 and CD86, in the inflamed ST [18-20].
T31 437-778 Sentence denotes The continuing emergence of activated CD4+ T cells, even though few in number, may be crucial in sustaining the activation of macrophages and synovial fibroblasts through cell surface signaling by means of cell surface CD69 and CD11, as well as the release of proinflammatory Th1 cytokines such as interferon gamma (IFN)-γ and IL-17 [21,22].
T32 779-924 Sentence denotes In addition, CD4+ T cells could stimulate B-cell production of autoantibodies such as rheumatoid factor and osteoclast-mediated bone destruction.
T33 925-1245 Sentence denotes Their obligatory role in RA synovitis was recently proved by successful treatment of active disease by selective inhibition of T-cell activation with fusion protein of cytotoxic T-cell-associated antigen 4 (CD152)-IgG, which can block the engagement of CD28 on T cells by binding to CD80 and CD86 with high avidity [23].

simple1

Id Subject Object Predicate Lexical cue
T3927 1217-1221 Protein denotes CD86
T3926 1208-1212 Protein denotes CD80
T3925 1178-1182 Protein denotes CD28
T3924 1093-1142 Protein denotes cytotoxic T-cell-associated antigen 4 (CD152)-IgG
T3923 792-795 Protein denotes CD4
T3922 764-769 Protein denotes IL-17
T3921 752-759 Protein denotes (IFN)-γ
T3920 735-751 Protein denotes interferon gamma
T3919 665-669 Protein denotes CD11
T3918 656-660 Protein denotes CD69
T3917 475-478 Protein denotes CD4
T3916 403-407 Protein denotes CD86
T3915 394-398 Protein denotes CD80
T3914 380-384 Protein denotes CD28
T3913 248-261 Protein denotes HLA-DRB1*0401
T3912 230-243 Protein denotes HLA-DRB1*0404
T3911 77-81 Protein denotes CD28
T3910 0-3 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6471 1164-1174 Binding denotes engagement
T6470 1197-1204 Binding denotes binding
T6469 686-693 Localization denotes release
T6437 1217-1221 Protein denotes CD86
T6436 1208-1212 Protein denotes CD80
T6435 1178-1182 Protein denotes CD28
T6434 1093-1142 Protein denotes cytotoxic T-cell-associated antigen 4 (CD152)-IgG
T6433 792-795 Protein denotes CD4
T6432 764-769 Protein denotes IL-17
T6431 752-759 Protein denotes (IFN)-γ
T6430 735-751 Protein denotes interferon gamma
T6429 665-669 Protein denotes CD11
T6428 656-660 Protein denotes CD69
T6427 475-478 Protein denotes CD4
T6426 403-407 Protein denotes CD86
T6425 394-398 Protein denotes CD80
T6424 380-384 Protein denotes CD28
T6423 248-261 Protein denotes HLA-DRB1*0401
T6422 230-243 Protein denotes HLA-DRB1*0404
T6421 77-81 Protein denotes CD28
T6420 0-3 Protein denotes CD4
R3160 T6430 T6469 themeOf interferon gamma,release
R3166 T6431 T6469 themeOf (IFN)-γ,release
R3168 T6432 T6469 themeOf IL-17,release
R3169 T6435 T6471 themeOf CD28,engagement
R3172 T6436 T6470 themeOf CD80,binding
R3173 T6437 T6470 themeOf CD86,binding

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4910 1164-1174 Binding denotes engagement
T4909 1197-1204 Binding denotes binding
T4875 1217-1221 Protein denotes CD86
T4874 1208-1212 Protein denotes CD80
T4873 1178-1182 Protein denotes CD28
T4872 1093-1142 Protein denotes cytotoxic T-cell-associated antigen 4 (CD152)-IgG
T4871 792-795 Protein denotes CD4
T4870 764-769 Protein denotes IL-17
T4869 752-759 Protein denotes (IFN)-γ
T4868 735-751 Protein denotes interferon gamma
T4867 665-669 Protein denotes CD11
T4866 656-660 Protein denotes CD69
T4865 475-478 Protein denotes CD4
T4864 403-407 Protein denotes CD86
T4863 394-398 Protein denotes CD80
T4862 380-384 Protein denotes CD28
T4861 248-261 Protein denotes HLA-DRB1*0401
T4860 230-243 Protein denotes HLA-DRB1*0404
T4859 77-81 Protein denotes CD28
T4858 0-3 Protein denotes CD4
R1932 T4873 T4910 themeOf CD28,engagement
R1934 T4874 T4909 themeOf CD80,binding
R1937 T4875 T4909 themeOf CD86,binding

DLUT931

Id Subject Object Predicate Lexical cue
T5927 1154-1159 Negative_regulation denotes block
T5926 1197-1204 Binding denotes binding
T5925 1164-1174 Binding denotes engagement
T5924 334-344 Gene_expression denotes expression
T5887 1217-1221 Protein denotes CD86
T5886 1208-1212 Protein denotes CD80
T5885 1178-1182 Protein denotes CD28
T5884 1093-1142 Protein denotes cytotoxic T-cell-associated antigen 4 (CD152)-IgG
T5883 792-795 Protein denotes CD4
T5882 764-769 Protein denotes IL-17
T5881 752-759 Protein denotes (IFN)-γ
T5880 735-751 Protein denotes interferon gamma
T5879 665-669 Protein denotes CD11
T5878 656-660 Protein denotes CD69
T5877 475-478 Protein denotes CD4
T5876 403-407 Protein denotes CD86
T5875 394-398 Protein denotes CD80
T5874 380-384 Protein denotes CD28
T5873 248-261 Protein denotes HLA-DRB1*0401
T5872 230-243 Protein denotes HLA-DRB1*0404
T5871 77-81 Protein denotes CD28
T5870 0-3 Protein denotes CD4
R2918 T5872 T5924 themeOf HLA-DRB1*0404,expression
R2926 T5873 T5924 themeOf HLA-DRB1*0401,expression
R2928 T5874 T5924 themeOf CD28,expression
R2929 T5875 T5924 themeOf CD80,expression
R2934 T5876 T5924 themeOf CD86,expression
R2946 T5884 T5926 themeOf cytotoxic T-cell-associated antigen 4 (CD152)-IgG,binding
R2955 T5884 T5926 themeOf cytotoxic T-cell-associated antigen 4 (CD152)-IgG,binding
R2956 T5885 T5925 themeOf CD28,engagement
R2960 T5886 T5926 themeOf CD80,binding
R2963 T5886 T5926 themeOf CD80,binding
R2964 T5887 T5926 themeOf CD86,binding
R2965 T5887 T5926 themeOf CD86,binding
R2970 T5925 T5927 themeOf engagement,block
R2971 T5925 T5927 themeOf engagement,block
R2972 T5925 T5927 themeOf engagement,block
R2973 T5926 T5927 causeOf binding,block
R2974 T5926 T5927 causeOf binding,block
R2975 T5926 T5927 causeOf binding,block

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue Speculation
T6247 713-734 Protein denotes Th1 cytokines such as
T6245 412-435 Protein denotes the inflamed ST [18-20]
T6352 1197-1244 Binding denotes binding to CD80 and CD86 with high avidity [23]
T6350 77-121 Regulation denotes CD28-mediated costimulatory signaling, in RA
T6193 1082-1143 Protein denotes protein of cytotoxic T-cell-associated antigen 4 (CD152)-IgG,
T6187 204-243 Protein denotes the MHC class II antigens HLA-DRB1*0404
T6185 608-620 Entity denotes cell surface
T6183 1217-1221 Protein denotes CD86
T6180 643-660 Protein denotes cell surface CD69
T6173 792-804 Entity denotes CD4+ T cells
T6172 1052-1058 Entity denotes T-cell
T6170 380-384 Protein denotes CD28
T6166 119-121 Protein denotes RA
T6243 713-745 Protein denotes Th1 cytokines such as interferon
T6239 1093-1143 Protein denotes cytotoxic T-cell-associated antigen 4 (CD152)-IgG,
T6236 348-370 Entity denotes MHC class II molecules
T6233 821-882 Protein denotes B-cell production of autoantibodies such as rheumatoid factor
T6229 77-90 Protein denotes CD28-mediated
T6218 665-669 Protein denotes CD11
T6214 375-392 Entity denotes both CD28 ligands
T6210 30-56 Entity denotes by arthritogenic antigens,
T6206 579-599 Entity denotes synovial fibroblasts
T6205 221-229 Entity denotes antigens
T6200 839-856 Protein denotes of autoantibodies
T6278 563-574 Entity denotes macrophages
T6268 0-12 Entity denotes CD4+ T cells
T6254 403-407 Protein denotes CD86
T6252 821-827 Entity denotes B-cell
T6251 204-243 Protein denotes the MHC class II antigens HLA-DRB1*0404
T6292 1208-1212 Protein denotes CD80
T6291 764-769 Protein denotes IL-17
T6285 887-906 Entity denotes osteoclast-mediated
T6343 1028-1069 Negative_regulation denotes selective inhibition of T-cell activation
T6340 779-882 Positive_regulation denotes In addition, CD4+ T cells could stimulate B-cell production of autoantibodies such as rheumatoid factor true
T6339 950-952 Protein denotes RA
T6338 643-655 Entity denotes cell surface
T6333 1178-1182 Protein denotes CD28
T6325 753-756 Protein denotes IFN
T6320 348-360 Protein denotes MHC class II
T6318 1186-1193 Entity denotes T cells
T6314 394-398 Protein denotes CD80
T6301 248-274 Protein denotes HLA-DRB1*0401 with disease
T6300 465-487 Entity denotes activated CD4+ T cells
T6371 643-661 Localization denotes cell surface CD69
T6370 887-923 Regulation denotes osteoclast-mediated bone destruction
T6360 821-864 Gene_expression denotes B-cell production of autoantibodies such as
R3100 T6200 T6360 themeOf of autoantibodies,B-cell production of autoantibodies such as
R3103 T6180 T6371 themeOf cell surface CD69,cell surface CD69
R3104 T6183 T6352 themeOf CD86,binding to CD80 and CD86 with high avidity [23]
R3115 T6229 T6350 causeOf CD28-mediated,"CD28-mediated costimulatory signaling, in RA"
R3126 T6285 T6370 causeOf osteoclast-mediated,osteoclast-mediated bone destruction
R3127 T6292 T6352 themeOf CD80,binding to CD80 and CD86 with high avidity [23]
R3136 T6338 T6371 locationOf cell surface,cell surface CD69
R3099 T6173 T6340 causeOf CD4+ T cells,"In addition, CD4+ T cells could stimulate B-cell production of autoantibodies such as rheumatoid factor"
R3117 T6233 T6340 themeOf B-cell production of autoantibodies such as rheumatoid factor,"In addition, CD4+ T cells could stimulate B-cell production of autoantibodies such as rheumatoid factor"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5729 1244-1245 . denotes .
T5728 1243-1244 NNP denotes ]
T5727 1241-1243 CD denotes 23
T5726 1240-1241 NNP denotes [
T5725 1232-1239 NN denotes avidity
T5724 1227-1231 JJ denotes high
T5723 1222-1226 IN denotes with
T5722 1217-1221 NNP denotes CD86
T5721 1213-1216 CC denotes and
T5720 1208-1212 NNP denotes CD80
T5719 1205-1207 TO denotes to
T5718 1197-1204 JJ denotes binding
T5717 1194-1196 IN denotes by
T5716 1188-1193 NNS denotes cells
T5715 1186-1187 NNP denotes T
T5714 1183-1185 IN denotes on
T5713 1178-1182 CD denotes CD28
T5712 1175-1177 IN denotes of
T5711 1164-1174 NN denotes engagement
T5710 1160-1163 DT denotes the
T5703 1137-1138 -RRB- denotes )
T5702 1132-1137 NN denotes CD152
T5701 1131-1132 -LRB- denotes (
T5700 1129-1130 CD denotes 4
T5699 1121-1128 NN denotes antigen
T5698 1103-1120 JJ denotes T-cell-associated
T5697 1093-1102 JJ denotes cytotoxic
T5696 1090-1092 IN denotes of
T5695 1082-1089 NN denotes protein
T5694 1075-1081 NN denotes fusion
T5693 1070-1074 IN denotes with
T5692 1059-1069 NN denotes activation
T5691 1052-1058 NNP denotes T-cell
T5690 1049-1051 IN denotes of
T5689 1038-1048 NN denotes inhibition
T5688 1028-1037 JJ denotes selective
T5687 1025-1027 IN denotes by
T5686 1017-1024 NN denotes disease
T5685 1010-1016 JJ denotes active
T5684 1007-1009 IN denotes of
T5683 997-1006 NN denotes treatment
T5682 986-996 JJ denotes successful
T5681 983-985 IN denotes by
T5680 976-982 VBN denotes proved
T5679 967-975 RB denotes recently
T5678 963-966 VBD denotes was
T5677 953-962 NN denotes synovitis
T5676 950-952 NNP denotes RA
T5675 947-949 IN denotes in
T5674 942-946 NN denotes role
T5673 931-941 JJ denotes obligatory
T5672 925-930 PRP$ denotes Their
T5671 923-924 . denotes .
T5670 912-923 NN denotes destruction
T5669 907-911 NN denotes bone
T5668 887-906 JJ denotes osteoclast-mediated
T5667 883-886 CC denotes and
T5666 876-882 NN denotes factor
T5665 865-875 JJ denotes rheumatoid
T5664 862-864 IN denotes as
T5663 857-861 JJ denotes such
T5662 842-856 NNS denotes autoantibodies
T5661 839-841 IN denotes of
T5603 523-530 JJ denotes crucial
T5602 520-522 VB denotes be
T5601 516-519 MD denotes may
T5600 514-515 , denotes ,
T5599 508-514 NN denotes number
T5598 505-507 IN denotes in
T5597 501-504 JJ denotes few
T5596 494-500 IN denotes though
T5595 489-493 RB denotes even
T5594 487-488 , denotes ,
T5593 482-487 NNS denotes cells
T5592 480-481 NNP denotes T
T5591 478-479 CD denotes +
T5590 475-478 NNP denotes CD4
T5589 465-474 VBN denotes activated
T5588 462-464 IN denotes of
T5587 452-461 NN denotes emergence
T5586 441-451 VBG denotes continuing
T5585 437-440 DT denotes The
T5584 435-436 . denotes .
T5583 434-435 NNP denotes ]
T5582 429-434 CD denotes 18-20
T5581 428-429 NNP denotes [
T5580 425-427 NNP denotes ST
T5579 416-424 JJ denotes inflamed
T5578 412-415 DT denotes the
T5577 409-411 IN denotes in
T5576 407-408 , denotes ,
T5575 403-407 NNP denotes CD86
T5574 399-402 CC denotes and
T5573 394-398 NNP denotes CD80
T5572 392-393 , denotes ,
T5571 385-392 NNS denotes ligands
T5570 380-384 CD denotes CD28
T5569 375-379 DT denotes both
T5568 371-374 CC denotes and
T5567 361-370 NNS denotes molecules
T5566 358-360 NNP denotes II
T5565 352-357 NN denotes class
T5564 348-351 NNP denotes MHC
T5563 345-347 IN denotes of
T5562 334-344 NN denotes expression
T5561 323-333 JJ denotes high-level
T5560 319-322 DT denotes the
T5559 316-318 IN denotes by
T5558 312-315 CC denotes and
T5557 310-311 , denotes ,
T5556 309-310 NNP denotes ]
T5555 304-309 CD denotes 16,17
T5554 303-304 NNP denotes [
T5553 294-302 NN denotes severity
T5552 290-293 CC denotes and
T5551 275-289 NN denotes susceptibility
T5550 267-274 NN denotes disease
T5549 262-266 IN denotes with
T5548 257-261 CD denotes 0401
T5547 256-257 SYM denotes *
T5546 248-256 NNP denotes HLA-DRB1
T5545 244-247 CC denotes and
T5544 239-243 CD denotes 0404
T5543 238-239 SYM denotes *
T5542 230-238 NNP denotes HLA-DRB1
T5541 221-229 VBZ denotes antigens
T5540 218-220 NNP denotes II
T5539 212-217 NN denotes class
T5538 208-211 NNP denotes MHC
T5537 204-207 DT denotes the
T5536 201-203 IN denotes of
T5535 193-200 NN denotes linkage
T5534 189-192 DT denotes the
T5533 186-188 IN denotes by
T5532 176-185 VBN denotes supported
T5531 171-175 VBN denotes been
T5530 167-170 VBZ denotes has
T5529 159-166 NN denotes process
T5528 148-158 JJ denotes autoimmune
T5527 143-147 DT denotes this
T5526 140-142 IN denotes of
T5525 127-139 NN denotes significance
T5524 123-126 DT denotes The
T5523 121-122 . denotes .
T5522 119-121 NNP denotes RA
T5521 116-118 IN denotes in
T5520 114-115 , denotes ,
T5519 105-114 VBG denotes signaling
T5518 91-104 JJ denotes costimulatory
T5517 77-90 JJ denotes CD28-mediated
T5516 72-76 IN denotes with
T5515 60-71 NN denotes conjunction
T5514 57-59 IN denotes in
T5505 5-6 NNP denotes T
T5504 3-4 CD denotes +
T5503 0-3 CD denotes CD4
T5513 55-56 , denotes ,
T5512 47-55 NNS denotes antigens
T5511 33-46 JJ denotes arthritogenic
T5510 30-32 IN denotes by
T5509 20-29 VBN denotes activated
T5508 17-19 VB denotes be
T5507 13-16 MD denotes may
T5506 7-12 NNS denotes cells
T5632 697-712 JJ denotes proinflammatory
T5631 694-696 IN denotes of
T5630 686-693 NN denotes release
T5629 682-685 DT denotes the
T5628 679-681 IN denotes as
T5627 674-678 RB denotes well
T5626 671-673 RB denotes as
T5625 669-670 , denotes ,
T5624 665-669 NNP denotes CD11
T5623 661-664 CC denotes and
T5622 656-660 NNP denotes CD69
T5621 648-655 NN denotes surface
T5620 643-647 NN denotes cell
T5619 640-642 IN denotes of
T5618 634-639 NNS denotes means
T5617 631-633 IN denotes by
T5616 621-630 VBG denotes signaling
T5615 613-620 NN denotes surface
T5614 608-612 NN denotes cell
T5613 600-607 IN denotes through
T5612 588-599 NNS denotes fibroblasts
T5611 579-587 JJ denotes synovial
T5610 575-578 CC denotes and
T5609 563-574 NNS denotes macrophages
T5608 560-562 IN denotes of
T5607 549-559 NN denotes activation
T5606 545-548 DT denotes the
T5605 534-544 VBG denotes sustaining
T5604 531-533 IN denotes in
T5660 828-838 NN denotes production
T5659 821-827 JJ denotes B-cell
T5658 811-820 VB denotes stimulate
T5657 805-810 MD denotes could
T5656 799-804 NNS denotes cells
T5655 797-798 NNP denotes T
T5654 795-796 NNP denotes +
T5653 792-795 NNP denotes CD4
T5652 790-791 , denotes ,
T5651 782-790 NN denotes addition
T5650 779-781 IN denotes In
T5649 777-778 . denotes .
T5648 776-777 NNP denotes ]
T5647 771-776 CD denotes 21,22
T5646 770-771 NNP denotes [
T5645 764-769 NNP denotes IL-17
T5644 760-763 CC denotes and
T5643 758-759 NN denotes γ
T5642 757-758 : denotes -
T5641 756-757 -RRB- denotes )
T5640 753-756 NNP denotes IFN
T5639 752-753 -LRB- denotes (
T5638 746-751 NN denotes gamma
T5637 735-745 NN denotes interferon
T5636 732-734 IN denotes as
T5635 727-731 JJ denotes such
T5634 717-726 NNS denotes cytokines
T5633 713-716 JJ denotes Th1
T5709 1154-1159 VB denotes block
T5708 1150-1153 MD denotes can
T5707 1144-1149 WDT denotes which
T5706 1142-1143 , denotes ,
T5705 1139-1142 NNP denotes IgG
T5704 1138-1139 : denotes -
R2516 T5506 T5509 nsubjpass cells,activated
R2520 T5507 T5509 aux may,activated
R2524 T5508 T5509 auxpass be,activated
R2528 T5509 T5509 ROOT activated,activated
R2535 T5510 T5509 agent by,activated
R2539 T5511 T5512 amod arthritogenic,antigens
R2543 T5512 T5510 pobj antigens,by
R2546 T5513 T5509 punct ",",activated
R2551 T5514 T5509 prep in,activated
R2554 T5515 T5514 pobj conjunction,in
R2558 T5516 T5515 prep with,conjunction
R2561 T5517 T5519 nsubj CD28-mediated,signaling
R2565 T5518 T5519 amod costimulatory,signaling
R2568 T5519 T5516 pcomp signaling,with
R2571 T5520 T5519 punct ",",signaling
R2573 T5521 T5519 prep in,signaling
R2577 T5522 T5521 pobj RA,in
R2583 T5523 T5509 punct .,activated
R2585 T5503 T5509 nsubjpass CD4,activated
R2586 T5504 T5506 nummod +,cells
R2587 T5524 T5525 det The,significance
R2588 T5505 T5506 compound T,cells
R2589 T5525 T5532 nsubjpass significance,supported
R2590 T5526 T5525 prep of,significance
R2591 T5537 T5541 det the,antigens
R2592 T5538 T5540 compound MHC,II
R2593 T5527 T5529 det this,process
R2594 T5539 T5540 compound class,II
R2595 T5540 T5541 compound II,antigens
R2596 T5528 T5529 amod autoimmune,process
R2597 T5541 T5536 pobj antigens,of
R2598 T5542 T5541 appos HLA-DRB1,antigens
R2599 T5529 T5526 pobj process,of
R2600 T5543 T5532 punct *,supported
R2601 T5544 T5544 ROOT 0404,0404
R2602 T5545 T5544 cc and,0404
R2603 T5530 T5532 aux has,supported
R2604 T5546 T5544 conj HLA-DRB1,0404
R2605 T5547 T5546 punct *,HLA-DRB1
R2606 T5548 T5546 amod 0401,HLA-DRB1
R2607 T5531 T5532 auxpass been,supported
R2608 T5549 T5546 prep with,HLA-DRB1
R2609 T5550 T5551 compound disease,susceptibility
R2610 T5551 T5549 pobj susceptibility,with
R2611 T5532 T5532 ROOT supported,supported
R2612 T5552 T5551 cc and,susceptibility
R2613 T5553 T5551 conj severity,susceptibility
R2614 T5554 T5556 compound [,]
R2615 T5555 T5556 compound "16,17",]
R2616 T5533 T5532 agent by,supported
R2617 T5556 T5546 conj ],HLA-DRB1
R2618 T5557 T5556 punct ",",]
R2619 T5558 T5544 cc and,0404
R2620 T5534 T5535 det the,linkage
R2621 T5559 T5544 conj by,0404
R2622 T5560 T5562 det the,expression
R2623 T5561 T5562 amod high-level,expression
R2624 T5535 T5533 pobj linkage,by
R2625 T5562 T5559 pobj expression,by
R2626 T5563 T5562 prep of,expression
R2627 T5564 T5567 compound MHC,molecules
R2628 T5536 T5535 prep of,linkage
R2629 T5565 T5567 compound class,molecules
R2630 T5566 T5567 compound II,molecules
R2631 T5567 T5563 pobj molecules,of
R2632 T5568 T5544 cc and,0404
R2633 T5569 T5571 det both,ligands
R2634 T5604 T5602 prep in,be
R2635 T5570 T5571 nummod CD28,ligands
R2636 T5605 T5604 pcomp sustaining,in
R2637 T5571 T5544 conj ligands,0404
R2638 T5572 T5571 punct ",",ligands
R2639 T5573 T5571 conj CD80,ligands
R2640 T5574 T5573 cc and,CD80
R2641 T5606 T5607 det the,activation
R2642 T5575 T5573 conj CD86,CD80
R2643 T5576 T5571 punct ",",ligands
R2644 T5577 T5544 prep in,0404
R2645 T5607 T5605 dobj activation,sustaining
R2646 T5578 T5583 det the,]
R2647 T5579 T5583 amod inflamed,]
R2648 T5608 T5607 prep of,activation
R2649 T5580 T5581 compound ST,[
R2650 T5581 T5583 nmod [,]
R2651 T5609 T5608 pobj macrophages,of
R2652 T5582 T5583 nummod 18-20,]
R2653 T5583 T5577 pobj ],in
R2654 T5584 T5544 punct .,0404
R2655 T5610 T5609 cc and,macrophages
R2656 T5585 T5587 det The,emergence
R2657 T5586 T5587 amod continuing,emergence
R2658 T5587 T5602 nsubj emergence,be
R2659 T5611 T5612 amod synovial,fibroblasts
R2660 T5588 T5587 prep of,emergence
R2661 T5589 T5593 amod activated,cells
R2662 T5612 T5609 conj fibroblasts,macrophages
R2663 T5590 T5593 compound CD4,cells
R2664 T5591 T5593 nummod +,cells
R2665 T5613 T5605 prep through,sustaining
R2666 T5592 T5593 compound T,cells
R2667 T5593 T5588 pobj cells,of
R2668 T5594 T5587 punct ",",emergence
R2669 T5614 T5615 compound cell,surface
R2670 T5595 T5597 advmod even,few
R2671 T5596 T5597 advmod though,few
R2672 T5597 T5602 advcl few,be
R2673 T5615 T5613 pobj surface,through
R2674 T5598 T5597 prep in,few
R2675 T5599 T5598 pobj number,in
R2676 T5600 T5602 punct ",",be
R2677 T5616 T5605 conj signaling,sustaining
R2678 T5601 T5602 aux may,be
R2679 T5602 T5602 ROOT be,be
R2680 T5603 T5602 acomp crucial,be
R2681 T5617 T5616 prep by,signaling
R2682 T5633 T5634 amod Th1,cytokines
R2683 T5618 T5617 pobj means,by
R2684 T5634 T5631 pobj cytokines,of
R2685 T5635 T5636 amod such,as
R2686 T5636 T5634 prep as,cytokines
R2687 T5619 T5618 prep of,means
R2688 T5637 T5638 compound interferon,gamma
R2689 T5638 T5636 pobj gamma,as
R2690 T5639 T5640 punct (,IFN
R2691 T5620 T5621 compound cell,surface
R2692 T5640 T5638 appos IFN,gamma
R2693 T5641 T5640 punct ),IFN
R2694 T5642 T5638 punct -,gamma
R2695 T5621 T5622 compound surface,CD69
R2696 T5643 T5638 conj γ,gamma
R2697 T5644 T5643 cc and,γ
R2698 T5645 T5646 compound IL-17,[
R2699 T5622 T5619 pobj CD69,of
R2700 T5646 T5630 appos [,release
R2701 T5647 T5648 compound "21,22",]
R2702 T5648 T5646 appos ],[
R2703 T5623 T5622 cc and,CD69
R2704 T5649 T5602 punct .,be
R2705 T5624 T5622 conj CD11,CD69
R2706 T5650 T5658 prep In,stimulate
R2707 T5625 T5616 punct ",",signaling
R2708 T5651 T5650 pobj addition,In
R2709 T5652 T5658 punct ",",stimulate
R2710 T5653 T5655 compound CD4,T
R2711 T5626 T5628 advmod as,as
R2712 T5654 T5655 compound +,T
R2713 T5655 T5656 compound T,cells
R2714 T5656 T5658 nsubj cells,stimulate
R2715 T5627 T5628 advmod well,as
R2716 T5657 T5658 aux could,stimulate
R2717 T5658 T5658 ROOT stimulate,stimulate
R2718 T5628 T5630 cc as,release
R2719 T5659 T5660 amod B-cell,production
R2720 T5660 T5658 dobj production,stimulate
R2721 T5629 T5630 det the,release
R2722 T5661 T5660 prep of,production
R2723 T5662 T5661 pobj autoantibodies,of
R2724 T5663 T5664 amod such,as
R2725 T5630 T5602 advcl release,be
R2726 T5664 T5662 prep as,autoantibodies
R2727 T5665 T5666 amod rheumatoid,factor
R2728 T5666 T5664 pobj factor,as
R2729 T5631 T5630 prep of,release
R2730 T5667 T5666 cc and,factor
R2731 T5668 T5670 amod osteoclast-mediated,destruction
R2732 T5669 T5670 compound bone,destruction
R2733 T5670 T5666 conj destruction,factor
R2734 T5671 T5658 punct .,stimulate
R2735 T5632 T5634 amod proinflammatory,cytokines
R2736 T5672 T5674 poss Their,role
R2737 T5673 T5674 amod obligatory,role
R2738 T5674 T5680 nsubjpass role,proved
R2739 T5704 T5705 punct -,IgG
R2740 T5675 T5674 prep in,role
R2741 T5676 T5677 compound RA,synovitis
R2742 T5677 T5675 pobj synovitis,in
R2743 T5678 T5680 auxpass was,proved
R2744 T5679 T5680 advmod recently,proved
R2745 T5680 T5680 ROOT proved,proved
R2746 T5705 T5695 appos IgG,protein
R2747 T5681 T5680 agent by,proved
R2748 T5682 T5683 amod successful,treatment
R2749 T5683 T5681 pobj treatment,by
R2750 T5706 T5695 punct ",",protein
R2751 T5684 T5683 prep of,treatment
R2752 T5685 T5686 amod active,disease
R2753 T5686 T5684 pobj disease,of
R2754 T5687 T5680 agent by,proved
R2755 T5707 T5709 nsubj which,block
R2756 T5688 T5689 amod selective,inhibition
R2757 T5689 T5687 pobj inhibition,by
R2758 T5690 T5689 prep of,inhibition
R2759 T5708 T5709 aux can,block
R2760 T5691 T5692 compound T-cell,activation
R2761 T5692 T5690 pobj activation,of
R2762 T5693 T5680 prep with,proved
R2763 T5709 T5695 relcl block,protein
R2764 T5694 T5695 compound fusion,protein
R2765 T5695 T5693 pobj protein,with
R2766 T5710 T5711 det the,engagement
R2767 T5696 T5695 prep of,protein
R2768 T5697 T5699 amod cytotoxic,antigen
R2769 T5698 T5699 amod T-cell-associated,antigen
R2770 T5699 T5696 pobj antigen,of
R2771 T5711 T5709 dobj engagement,block
R2772 T5700 T5699 nummod 4,antigen
R2773 T5701 T5699 punct (,antigen
R2774 T5702 T5699 appos CD152,antigen
R2775 T5712 T5711 prep of,engagement
R2776 T5703 T5699 punct ),antigen
R2777 T5713 T5712 pobj CD28,of
R2778 T5714 T5709 prep on,block
R2779 T5715 T5716 compound T,cells
R2780 T5729 T5680 punct .,proved
R2784 T5716 T5714 pobj cells,on
R2788 T5717 T5709 prep by,block
R2791 T5718 T5717 pobj binding,by
R2794 T5719 T5718 prep to,binding
R2798 T5720 T5719 pobj CD80,to
R2802 T5721 T5720 cc and,CD80
R2806 T5722 T5720 conj CD86,CD80
R2810 T5723 T5709 prep with,block
R2814 T5724 T5725 amod high,avidity
R2818 T5725 T5726 compound avidity,[
R2822 T5726 T5723 pobj [,with
R2824 T5727 T5728 nummod 23,]
R2826 T5728 T5726 appos ],[

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3807 1154-1159 Negative_regulation denotes block
T3806 1154-1159 Negative_regulation denotes block
T3805 1197-1204 Binding denotes binding
T3804 1197-1204 Binding denotes binding
T3803 1164-1174 Binding denotes engagement
T3802 1217-1221 Protein denotes CD86
T3801 1208-1212 Protein denotes CD80
T3800 1178-1182 Protein denotes CD28
T3799 1139-1142 Protein denotes IgG
T3798 828-838 Gene_expression denotes production
T3797 865-882 Protein denotes rheumatoid factor
T3796 792-796 Protein denotes CD4+
T3795 686-693 Localization denotes release
T3794 686-693 Localization denotes release
T3793 753-756 Protein denotes IFN
T3792 735-751 Protein denotes interferon gamma
T3791 665-669 Protein denotes CD11
T3790 656-660 Protein denotes CD69
T3789 475-478 Protein denotes CD4
T3788 334-344 Gene_expression denotes expression
T3787 334-344 Gene_expression denotes expression
T3786 334-344 Gene_expression denotes expression
T3785 334-344 Gene_expression denotes expression
T3784 193-200 Binding denotes linkage
T3783 193-200 Binding denotes linkage
T3782 193-200 Binding denotes linkage
T3781 403-407 Protein denotes CD86
T3780 394-398 Protein denotes CD80
T3779 380-392 Protein denotes CD28 ligands
T3778 348-370 Protein denotes MHC class II molecules
T3777 252-256 Protein denotes DRB1
T3776 248-251 Protein denotes HLA
T3775 234-238 Protein denotes DRB1
T3774 230-233 Protein denotes HLA
T3773 208-229 Protein denotes MHC class II antigens
T3772 77-81 Protein denotes CD28
T3771 0-4 Protein denotes CD4+
R986 T3773 T3782 themeOf MHC class II antigens,linkage
R987 T3773 T3783 themeOf MHC class II antigens,linkage
R988 T3777 T3784 themeOf DRB1,linkage
R989 T3778 T3785 themeOf MHC class II molecules,expression
R990 T3779 T3782 themeOf CD28 ligands,linkage
R991 T3779 T3784 themeOf CD28 ligands,linkage
R992 T3779 T3786 themeOf CD28 ligands,expression
R993 T3780 T3787 themeOf CD80,expression
R994 T3781 T3783 themeOf CD86,linkage
R995 T3781 T3788 themeOf CD86,expression
R996 T3792 T3794 themeOf interferon gamma,release
R997 T3793 T3795 themeOf IFN,release
R998 T3797 T3798 themeOf rheumatoid factor,production
R999 T3800 T3803 themeOf CD28,engagement
R1000 T3801 T3804 themeOf CD80,binding
R1001 T3802 T3805 themeOf CD86,binding
R1002 T3803 T3806 themeOf engagement,block
R1004 T3804 T3806 causeOf binding,block
R1003 T3803 T3807 themeOf engagement,block
R1005 T3805 T3807 causeOf binding,block

test3

Id Subject Object Predicate Lexical cue
T2410 1217-1221 Protein denotes CD86
T2409 1208-1212 Protein denotes CD80
T2408 1197-1204 Binding denotes binding
T2407 1178-1182 Protein denotes CD28
T2406 1164-1174 Binding denotes engagement
T2405 1154-1159 Negative_regulation denotes block
T2404 1093-1142 Protein denotes cytotoxic T-cell-associated antigen 4 (CD152)-IgG
T2403 792-795 Protein denotes CD4
T2402 764-769 Protein denotes IL-17
T2401 752-759 Protein denotes (IFN)-γ
T2400 735-751 Protein denotes interferon gamma
T2399 665-669 Protein denotes CD11
T2398 656-660 Protein denotes CD69
T2397 475-478 Protein denotes CD4
T2396 403-407 Protein denotes CD86
T2395 394-398 Protein denotes CD80
T2394 380-384 Protein denotes CD28
T2393 334-344 Gene_expression denotes expression
T2392 248-261 Protein denotes HLA-DRB1*0401
T2391 230-243 Protein denotes HLA-DRB1*0404
T2390 77-81 Protein denotes CD28
T2389 0-3 Protein denotes CD4
T2319 1217-1221 Protein denotes CD86
T2318 1208-1212 Protein denotes CD80
T2317 1178-1182 Protein denotes CD28
T2316 1093-1142 Protein denotes cytotoxic T-cell-associated antigen 4 (CD152)-IgG
T2315 792-795 Protein denotes CD4
T2314 764-769 Protein denotes IL-17
T2313 752-759 Protein denotes (IFN)-γ
T2312 735-751 Protein denotes interferon gamma
T2311 665-669 Protein denotes CD11
T2310 656-660 Protein denotes CD69
T2309 475-478 Protein denotes CD4
T2308 403-407 Protein denotes CD86
T2307 394-398 Protein denotes CD80
T2306 380-384 Protein denotes CD28
T2305 248-261 Protein denotes HLA-DRB1*0401
T2304 230-243 Protein denotes HLA-DRB1*0404
T2303 77-81 Protein denotes CD28
T2302 0-3 Protein denotes CD4
R812 T2394 T2393 themeOf CD28,expression
R813 T2395 T2393 themeOf CD80,expression
R814 T2396 T2393 themeOf CD86,expression
R815 T2404 T2408 themeOf cytotoxic T-cell-associated antigen 4 (CD152)-IgG,binding
R816 T2406 T2405 themeOf engagement,block
R817 T2407 T2406 themeOf CD28,engagement
R818 T2407 T2408 themeOf CD28,binding
R819 T2409 T2408 themeOf CD80,binding
R820 T2410 T2408 themeOf CD86,binding

testone

Id Subject Object Predicate Lexical cue
T2128 764-769 Protein denotes IL-17
T2127 752-759 Protein denotes (IFN)-γ
T2126 735-751 Protein denotes interferon gamma
T2125 665-669 Protein denotes CD11
T2124 656-660 Protein denotes CD69
T2123 475-478 Protein denotes CD4
T2122 403-407 Protein denotes CD86
T2121 394-398 Protein denotes CD80
T2120 380-384 Protein denotes CD28
T2119 248-261 Protein denotes HLA-DRB1*0401
T2118 230-243 Protein denotes HLA-DRB1*0404
T2117 77-81 Protein denotes CD28
T2116 0-3 Protein denotes CD4
T2170 1197-1204 Binding denotes binding
T2169 1164-1174 Binding denotes engagement
T2168 1154-1159 Negative_regulation denotes block
T2167 334-344 Gene_expression denotes expression
T2133 1217-1221 Protein denotes CD86
T2132 1208-1212 Protein denotes CD80
T2131 1178-1182 Protein denotes CD28
T2130 1093-1142 Protein denotes cytotoxic T-cell-associated antigen 4 (CD152)-IgG
T2129 792-795 Protein denotes CD4
R747 T2121 T2167 themeOf CD80,expression
R748 T2122 T2167 themeOf CD86,expression
R749 T2131 T2169 themeOf CD28,engagement
R750 T2132 T2170 themeOf CD80,binding
R751 T2133 T2170 themeOf CD86,binding
R765 T2169 T2168 themeOf engagement,block
R766 T2170 T2168 causeOf binding,block