PMC:1064873 / 5231-5353 JSONTXT

{"project":"LappsTest","denotations":[{"id":"T2221","span":{"begin":0,"end":4},"obj":"Protein"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"biosemtest","denotations":[{"id":"T3107","span":{"begin":110,"end":119},"obj":"UMLS/C0037083"},{"id":"T3084","span":{"begin":82,"end":86},"obj":"UMLS/C0075747"},{"id":"T3065","span":{"begin":18,"end":21},"obj":"UMLS/C0454788"},{"id":"T2954","span":{"begin":87,"end":95},"obj":"UMLS/C0086597"},{"id":"T2914","span":{"begin":82,"end":86},"obj":"UMLS/C1332709"},{"id":"T2737","span":{"begin":65,"end":76},"obj":"UMLS/C2699427"},{"id":"T3220","span":{"begin":52,"end":60},"obj":"UMLS/C0003320"},{"id":"T3197","span":{"begin":82,"end":86},"obj":"UMLS/C1426202"},{"id":"T3122","span":{"begin":10,"end":17},"obj":"UMLS/C0039194"},{"id":"T2641","span":{"begin":25,"end":34},"obj":"UMLS/C1879547"},{"id":"T2897","span":{"begin":18,"end":21},"obj":"UMLS/C0337876"},{"id":"T2857","span":{"begin":110,"end":119},"obj":"UMLS/C1710082"},{"id":"T2466","span":{"begin":87,"end":95},"obj":"UMLS/C0127400"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"pmc-enju-pas","denotations":[{"id":"T4527","span":{"begin":119,"end":121},"obj":"NN"},{"id":"T4526","span":{"begin":116,"end":118},"obj":"IN"},{"id":"T4525","span":{"begin":114,"end":115},"obj":"-COMMA-"},{"id":"T4524","span":{"begin":105,"end":114},"obj":"NN"},{"id":"T4523","span":{"begin":91,"end":104},"obj":"JJ"},{"id":"T4522","span":{"begin":77,"end":90},"obj":"JJ"},{"id":"T4521","span":{"begin":72,"end":76},"obj":"IN"},{"id":"T4520","span":{"begin":60,"end":71},"obj":"NN"},{"id":"T4519","span":{"begin":57,"end":59},"obj":"IN"},{"id":"T4518","span":{"begin":55,"end":56},"obj":"-COMMA-"},{"id":"T4517","span":{"begin":47,"end":55},"obj":"NN"},{"id":"T4516","span":{"begin":33,"end":46},"obj":"JJ"},{"id":"T4515","span":{"begin":30,"end":32},"obj":"IN"},{"id":"T4514","span":{"begin":20,"end":29},"obj":"VB"},{"id":"T4513","span":{"begin":17,"end":19},"obj":"VB"},{"id":"T4512","span":{"begin":13,"end":16},"obj":"MD"},{"id":"T4511","span":{"begin":7,"end":12},"obj":"NN"},{"id":"T4510","span":{"begin":5,"end":6},"obj":"NN"},{"id":"T4509","span":{"begin":0,"end":4},"obj":"JJ"}],"relations":[{"id":"R1540","pred":"arg1Of","subj":"T4511","obj":"T4509"},{"id":"R1541","pred":"arg1Of","subj":"T4511","obj":"T4510"},{"id":"R1542","pred":"arg1Of","subj":"T4511","obj":"T4512"},{"id":"R1543","pred":"arg1Of","subj":"T4511","obj":"T4513"},{"id":"R1544","pred":"arg2Of","subj":"T4511","obj":"T4514"},{"id":"R1546","pred":"arg2Of","subj":"T4514","obj":"T4512"},{"id":"R1547","pred":"arg2Of","subj":"T4514","obj":"T4513"},{"id":"R1548","pred":"arg1Of","subj":"T4514","obj":"T4515"},{"id":"R1549","pred":"arg1Of","subj":"T4514","obj":"T4518"},{"id":"R1550","pred":"arg1Of","subj":"T4514","obj":"T4519"},{"id":"R1551","pred":"arg1Of","subj":"T4514","obj":"T4525"},{"id":"R1552","pred":"arg1Of","subj":"T4514","obj":"T4526"},{"id":"R1554","pred":"arg2Of","subj":"T4517","obj":"T4515"},{"id":"R1555","pred":"arg1Of","subj":"T4517","obj":"T4516"},{"id":"R1557","pred":"arg2Of","subj":"T4520","obj":"T4519"},{"id":"R1558","pred":"arg1Of","subj":"T4520","obj":"T4521"},{"id":"R1561","pred":"arg2Of","subj":"T4524","obj":"T4521"},{"id":"R1562","pred":"arg1Of","subj":"T4524","obj":"T4522"},{"id":"R1563","pred":"arg1Of","subj":"T4524","obj":"T4523"},{"id":"R1564","pred":"arg2Of","subj":"T4527","obj":"T4526"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T3508","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T3507","span":{"begin":0,"end":3},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3848","span":{"begin":77,"end":81},"obj":"http://www.uniprot.org/uniprot/P10747"},{"id":"T3843","span":{"begin":0,"end":3},"obj":"http://www.uniprot.org/uniprot/P01730"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"GO-BP","denotations":[{"id":"T3282","span":{"begin":105,"end":114},"obj":"http://purl.obolibrary.org/obo/GO_0023052"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"sentences","denotations":[{"id":"T3252","span":{"begin":0,"end":122},"obj":"Sentence"},{"id":"T29","span":{"begin":0,"end":122},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"simple1","denotations":[{"id":"T3911","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T3910","span":{"begin":0,"end":3},"obj":"Protein"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"BioNLP16_DUT","denotations":[{"id":"T6421","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T6420","span":{"begin":0,"end":3},"obj":"Protein"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"BioNLP16_Messiy","denotations":[{"id":"T4859","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T4858","span":{"begin":0,"end":3},"obj":"Protein"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"DLUT931","denotations":[{"id":"T5871","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T5870","span":{"begin":0,"end":3},"obj":"Protein"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T6350","span":{"begin":77,"end":121},"obj":"Regulation"},{"id":"T6166","span":{"begin":119,"end":121},"obj":"Protein"},{"id":"T6229","span":{"begin":77,"end":90},"obj":"Protein"},{"id":"T6210","span":{"begin":30,"end":56},"obj":"Entity"},{"id":"T6268","span":{"begin":0,"end":12},"obj":"Entity"}],"relations":[{"id":"R3115","pred":"causeOf","subj":"T6229","obj":"T6350"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T5523","span":{"begin":121,"end":122},"obj":"."},{"id":"T5522","span":{"begin":119,"end":121},"obj":"NNP"},{"id":"T5521","span":{"begin":116,"end":118},"obj":"IN"},{"id":"T5520","span":{"begin":114,"end":115},"obj":","},{"id":"T5519","span":{"begin":105,"end":114},"obj":"VBG"},{"id":"T5518","span":{"begin":91,"end":104},"obj":"JJ"},{"id":"T5517","span":{"begin":77,"end":90},"obj":"JJ"},{"id":"T5516","span":{"begin":72,"end":76},"obj":"IN"},{"id":"T5515","span":{"begin":60,"end":71},"obj":"NN"},{"id":"T5514","span":{"begin":57,"end":59},"obj":"IN"},{"id":"T5505","span":{"begin":5,"end":6},"obj":"NNP"},{"id":"T5504","span":{"begin":3,"end":4},"obj":"CD"},{"id":"T5503","span":{"begin":0,"end":3},"obj":"CD"},{"id":"T5513","span":{"begin":55,"end":56},"obj":","},{"id":"T5512","span":{"begin":47,"end":55},"obj":"NNS"},{"id":"T5511","span":{"begin":33,"end":46},"obj":"JJ"},{"id":"T5510","span":{"begin":30,"end":32},"obj":"IN"},{"id":"T5509","span":{"begin":20,"end":29},"obj":"VBN"},{"id":"T5508","span":{"begin":17,"end":19},"obj":"VB"},{"id":"T5507","span":{"begin":13,"end":16},"obj":"MD"},{"id":"T5506","span":{"begin":7,"end":12},"obj":"NNS"}],"relations":[{"id":"R2516","pred":"nsubjpass","subj":"T5506","obj":"T5509"},{"id":"R2520","pred":"aux","subj":"T5507","obj":"T5509"},{"id":"R2524","pred":"auxpass","subj":"T5508","obj":"T5509"},{"id":"R2528","pred":"ROOT","subj":"T5509","obj":"T5509"},{"id":"R2535","pred":"agent","subj":"T5510","obj":"T5509"},{"id":"R2539","pred":"amod","subj":"T5511","obj":"T5512"},{"id":"R2543","pred":"pobj","subj":"T5512","obj":"T5510"},{"id":"R2546","pred":"punct","subj":"T5513","obj":"T5509"},{"id":"R2551","pred":"prep","subj":"T5514","obj":"T5509"},{"id":"R2554","pred":"pobj","subj":"T5515","obj":"T5514"},{"id":"R2558","pred":"prep","subj":"T5516","obj":"T5515"},{"id":"R2561","pred":"nsubj","subj":"T5517","obj":"T5519"},{"id":"R2565","pred":"amod","subj":"T5518","obj":"T5519"},{"id":"R2568","pred":"pcomp","subj":"T5519","obj":"T5516"},{"id":"R2571","pred":"punct","subj":"T5520","obj":"T5519"},{"id":"R2573","pred":"prep","subj":"T5521","obj":"T5519"},{"id":"R2577","pred":"pobj","subj":"T5522","obj":"T5521"},{"id":"R2583","pred":"punct","subj":"T5523","obj":"T5509"},{"id":"R2585","pred":"nsubjpass","subj":"T5503","obj":"T5509"},{"id":"R2586","pred":"nummod","subj":"T5504","obj":"T5506"},{"id":"R2588","pred":"compound","subj":"T5505","obj":"T5506"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T3772","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T3771","span":{"begin":0,"end":4},"obj":"Protein"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"test3","denotations":[{"id":"T2390","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T2389","span":{"begin":0,"end":3},"obj":"Protein"},{"id":"T2303","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T2302","span":{"begin":0,"end":3},"obj":"Protein"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}

{"project":"testone","denotations":[{"id":"T2117","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T2116","span":{"begin":0,"end":3},"obj":"Protein"}],"text":"CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA."}