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PMC:1064873 / 5224-5451 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T2221 7-11 Protein denotes CD4+

2_test

Id Subject Object Predicate Lexical cue
15535835-10553089-4156876 2-4 10553089 denotes 15

biosemtest

Id Subject Object Predicate Lexical cue
T3107 117-126 UMLS/C0037083 denotes ling, in
T3084 89-93 UMLS/C0075747 denotes medi
T3065 25-28 UMLS/C0454788 denotes e a
T3063 188-197 UMLS/C1317973 denotes rted by t
T2954 94-102 UMLS/C0086597 denotes ted cost
T2914 89-93 UMLS/C1332709 denotes medi
T2737 72-83 UMLS/C2699427 denotes nction with
T2705 188-197 UMLS/C0183683 denotes rted by t
T3229 155-159 UMLS/C0323983 denotes auto
T3220 59-67 UMLS/C0003320 denotes ens, in
T3197 89-93 UMLS/C1426202 denotes medi
T3189 188-197 UMLS/C0344211 denotes rted by t
T3141 160-178 UMLS/C0443146 denotes mmune process has
T3133 179-182 UMLS/C2348947 denotes een
T3122 17-24 UMLS/C0039194 denotes ls may
T2641 32-41 UMLS/C1879547 denotes ated by a
T2897 25-28 UMLS/C0337876 denotes e a
T2884 139-151 UMLS/C0237881 denotes ficance of t
T2857 117-126 UMLS/C1710082 denotes ling, in
T2466 94-102 UMLS/C0127400 denotes ted cost
T2446 139-151 UMLS/C0750502 denotes ficance of t
T2430 188-197 UMLS/C1521721 denotes rted by t

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4544 225-227 CD denotes II
T4543 219-224 NN denotes class
T4542 215-218 NN denotes MHC
T4541 211-214 DT denotes the
T4540 208-210 IN denotes of
T4539 200-207 NN denotes linkage
T4538 196-199 DT denotes the
T4537 193-195 IN denotes by
T4536 183-192 VB denotes supported
T4535 178-182 VB denotes been
T4534 174-177 VB denotes has
T4533 166-173 NN denotes process
T4532 155-165 JJ denotes autoimmune
T4531 150-154 DT denotes this
T4530 147-149 IN denotes of
T4529 134-146 NN denotes significance
T4528 130-133 DT denotes The
T4527 126-128 NN denotes RA
T4526 123-125 IN denotes in
T4525 121-122 -COMMA- denotes ,
T4524 112-121 NN denotes signaling
T4523 98-111 JJ denotes costimulatory
T4522 84-97 JJ denotes CD28-mediated
T4521 79-83 IN denotes with
T4520 67-78 NN denotes conjunction
T4519 64-66 IN denotes in
T4518 62-63 -COMMA- denotes ,
T4517 54-62 NN denotes antigens
T4516 40-53 JJ denotes arthritogenic
T4515 37-39 IN denotes by
T4514 27-36 VB denotes activated
T4513 24-26 VB denotes be
T4512 20-23 MD denotes may
T4511 14-19 NN denotes cells
T4510 12-13 NN denotes T
T4509 7-11 JJ denotes CD4+
T4508 4-5 -RRB- denotes ]
T4507 2-4 CD denotes 15
T4506 1-2 -LRB- denotes [
R1537 T4507 T4506 arg2Of 15,[
R1538 T4508 T4506 arg3Of ],[
R1540 T4511 T4509 arg1Of cells,CD4+
R1541 T4511 T4510 arg1Of cells,T
R1542 T4511 T4512 arg1Of cells,may
R1543 T4511 T4513 arg1Of cells,be
R1544 T4511 T4514 arg2Of cells,activated
R1546 T4514 T4512 arg2Of activated,may
R1547 T4514 T4513 arg2Of activated,be
R1548 T4514 T4515 arg1Of activated,by
R1549 T4514 T4518 arg1Of activated,","
R1550 T4514 T4519 arg1Of activated,in
R1551 T4514 T4525 arg1Of activated,","
R1552 T4514 T4526 arg1Of activated,in
R1554 T4517 T4515 arg2Of antigens,by
R1555 T4517 T4516 arg1Of antigens,arthritogenic
R1557 T4520 T4519 arg2Of conjunction,in
R1558 T4520 T4521 arg1Of conjunction,with
R1561 T4524 T4521 arg2Of signaling,with
R1562 T4524 T4522 arg1Of signaling,CD28-mediated
R1563 T4524 T4523 arg1Of signaling,costimulatory
R1564 T4527 T4526 arg2Of RA,in
R1565 T4529 T4528 arg1Of significance,The
R1566 T4529 T4530 arg1Of significance,of
R1567 T4529 T4534 arg1Of significance,has
R1568 T4529 T4535 arg1Of significance,been
R1569 T4529 T4536 arg2Of significance,supported
R1570 T4533 T4530 arg2Of process,of
R1571 T4533 T4531 arg1Of process,this
R1572 T4533 T4532 arg1Of process,autoimmune
R1576 T4536 T4534 arg2Of supported,has
R1578 T4536 T4535 arg2Of supported,been
R1583 T4539 T4538 arg1Of linkage,the
R1584 T4539 T4540 arg1Of linkage,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3508 84-88 Protein denotes CD28
T3507 7-10 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3848 84-88 http://www.uniprot.org/uniprot/P10747 denotes CD28
T3843 7-10 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-BP

Id Subject Object Predicate Lexical cue
T3282 112-121 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

sentences

Id Subject Object Predicate Lexical cue
T3252 7-129 Sentence denotes CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA.
T29 7-129 Sentence denotes CD4+ T cells may be activated by arthritogenic antigens, in conjunction with CD28-mediated costimulatory signaling, in RA.

simple1

Id Subject Object Predicate Lexical cue
T3911 84-88 Protein denotes CD28
T3910 7-10 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6421 84-88 Protein denotes CD28
T6420 7-10 Protein denotes CD4

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4859 84-88 Protein denotes CD28
T4858 7-10 Protein denotes CD4

DLUT931

Id Subject Object Predicate Lexical cue
T5871 84-88 Protein denotes CD28
T5870 7-10 Protein denotes CD4

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6350 84-128 Regulation denotes CD28-mediated costimulatory signaling, in RA
T6166 126-128 Protein denotes RA
T6229 84-97 Protein denotes CD28-mediated
T6210 37-63 Entity denotes by arthritogenic antigens,
T6268 7-19 Entity denotes CD4+ T cells
R3115 T6229 T6350 causeOf CD28-mediated,"CD28-mediated costimulatory signaling, in RA"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5540 225-227 NNP denotes II
T5539 219-224 NN denotes class
T5538 215-218 NNP denotes MHC
T5537 211-214 DT denotes the
T5536 208-210 IN denotes of
T5535 200-207 NN denotes linkage
T5534 196-199 DT denotes the
T5533 193-195 IN denotes by
T5532 183-192 VBN denotes supported
T5531 178-182 VBN denotes been
T5530 174-177 VBZ denotes has
T5529 166-173 NN denotes process
T5528 155-165 JJ denotes autoimmune
T5527 150-154 DT denotes this
T5526 147-149 IN denotes of
T5525 134-146 NN denotes significance
T5524 130-133 DT denotes The
T5523 128-129 . denotes .
T5522 126-128 NNP denotes RA
T5521 123-125 IN denotes in
T5520 121-122 , denotes ,
T5519 112-121 VBG denotes signaling
T5518 98-111 JJ denotes costimulatory
T5517 84-97 JJ denotes CD28-mediated
T5516 79-83 IN denotes with
T5515 67-78 NN denotes conjunction
T5514 64-66 IN denotes in
T5505 12-13 NNP denotes T
T5504 10-11 CD denotes +
T5503 7-10 CD denotes CD4
T5502 5-6 . denotes .
T5501 4-5 NNP denotes ]
T5500 2-4 CD denotes 15
T5499 1-2 NNP denotes [
T5513 62-63 , denotes ,
T5512 54-62 NNS denotes antigens
T5511 40-53 JJ denotes arthritogenic
T5510 37-39 IN denotes by
T5509 27-36 VBN denotes activated
T5508 24-26 VB denotes be
T5507 20-23 MD denotes may
T5506 14-19 NNS denotes cells
R2516 T5506 T5509 nsubjpass cells,activated
R2520 T5507 T5509 aux may,activated
R2524 T5508 T5509 auxpass be,activated
R2528 T5509 T5509 ROOT activated,activated
R2535 T5510 T5509 agent by,activated
R2539 T5511 T5512 amod arthritogenic,antigens
R2543 T5512 T5510 pobj antigens,by
R2546 T5513 T5509 punct ",",activated
R2551 T5514 T5509 prep in,activated
R2554 T5515 T5514 pobj conjunction,in
R2558 T5516 T5515 prep with,conjunction
R2561 T5517 T5519 nsubj CD28-mediated,signaling
R2565 T5518 T5519 amod costimulatory,signaling
R2568 T5519 T5516 pcomp signaling,with
R2571 T5520 T5519 punct ",",signaling
R2573 T5521 T5519 prep in,signaling
R2577 T5522 T5521 pobj RA,in
R2580 T5499 T5501 nmod [,]
R2581 T5500 T5501 nummod 15,]
R2583 T5523 T5509 punct .,activated
R2585 T5503 T5509 nsubjpass CD4,activated
R2586 T5504 T5506 nummod +,cells
R2587 T5524 T5525 det The,significance
R2588 T5505 T5506 compound T,cells
R2589 T5525 T5532 nsubjpass significance,supported
R2590 T5526 T5525 prep of,significance
R2592 T5538 T5540 compound MHC,II
R2593 T5527 T5529 det this,process
R2594 T5539 T5540 compound class,II
R2596 T5528 T5529 amod autoimmune,process
R2599 T5529 T5526 pobj process,of
R2603 T5530 T5532 aux has,supported
R2607 T5531 T5532 auxpass been,supported
R2611 T5532 T5532 ROOT supported,supported
R2616 T5533 T5532 agent by,supported
R2620 T5534 T5535 det the,linkage
R2624 T5535 T5533 pobj linkage,by
R2628 T5536 T5535 prep of,linkage

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3784 200-207 Binding denotes linkage
T3783 200-207 Binding denotes linkage
T3782 200-207 Binding denotes linkage
T3772 84-88 Protein denotes CD28
T3771 7-11 Protein denotes CD4+

test3

Id Subject Object Predicate Lexical cue
T2390 84-88 Protein denotes CD28
T2389 7-10 Protein denotes CD4
T2303 84-88 Protein denotes CD28
T2302 7-10 Protein denotes CD4

testone

Id Subject Object Predicate Lexical cue
T2117 84-88 Protein denotes CD28
T2116 7-10 Protein denotes CD4