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PMC:1064873 / 44-323 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T82 1-6 NN denotes gamma
T83 7-17 NN denotes production
T84 18-21 CC denotes and
T85 22-32 NN denotes expression
T86 33-35 IN denotes of
T87 36-46 NN denotes suppressor
T88 47-49 IN denotes of
T89 50-58 NN denotes cytokine
T90 59-68 VBG denotes signaling
T91 69-70 CD denotes 1
T92 71-73 IN denotes in
T93 74-76 NNP denotes CD
T94 76-77 CD denotes 4
T95 77-78 NN denotes +
T96 79-80 NN denotes T
T97 81-86 NNS denotes cells
T98 87-91 IN denotes from
T99 92-100 NNS denotes patients
T100 101-105 IN denotes with
T101 106-116 NN denotes rheumatoid
T102 117-126 NN denotes arthritis
T386 71-73 country_code denotes in
T415 59-68 OCCURRENCE denotes signaling
T430 152-157 OCCURRENCE denotes shown
T429 161-166 I_ACTION denotes block
T420 258-263 OCCURRENCE denotes found
T417 216-226 OCCURRENCE denotes inhibiting
T390 255-257 stop denotes We
T389 213-215 country_code denotes by
T388 158-160 country_code denotes to
T387 137-139 state denotes IL
T127 269-279 JJ denotes peripheral
T126 264-268 IN denotes that
T125 258-263 VBD denotes found
T124 255-257 PRP denotes We
T123 253-254 . denotes .
T122 246-253 NN denotes pathway
T121 236-245 VBG denotes signaling
T120 233-235 CD denotes 28
T119 231-233 NNP denotes CD
T118 227-230 DT denotes the
T117 216-226 VBG denotes inhibiting
T116 213-215 IN denotes by
T115 204-212 NN denotes response
T114 195-203 NN denotes cytokine
T113 190-194 NN denotes cell
T112 188-190 NNP denotes T-
T111 171-187 JJ denotes antigen-specific
T110 167-170 DT denotes the
T109 161-166 VB denotes block
T108 158-160 TO denotes to
T107 152-157 VBN denotes shown
T106 147-151 VBN denotes been
T105 143-146 VBZ denotes has
T104 140-142 CD denotes 10
T103 137-140 NNP denotes IL-

biosemtest

Id Subject Object Predicate Lexical cue
T445 36-70 UP/O15524 denotes suppressor of cytokine signaling 1
T453 36-70 UP/O35716 denotes suppressor of cytokine signaling 1
T510 81-86 UMLS/C1269647 denotes cells
T532 92-100 UMLS/C1578485 denotes patients
T537 92-100 UMLS/C1578484 denotes patients
T542 92-100 UMLS/C1578486 denotes patients
T547 92-100 UMLS/C1578481 denotes patients
T551 92-100 UMLS/C1578480 denotes patients
T555 92-100 UMLS/C1578483 denotes patients
T559 81-86 UMLS/C1704653 denotes cells
T560 22-32 UMLS/C0017262 denotes expression
T562 92-100 UMLS/C1578479 denotes patients
T582 92-100 UMLS/C0030705 denotes patients
T630 106-126 UMLS/C0003873 denotes rheumatoid arthritis
T638 81-86 UMLS/C1948049 denotes cells
T647 22-32 UMLS/C0185117 denotes expression
T650 81-86 UMLS/C1136359 denotes cells
T658 36-70 UP/Q9QX78 denotes suppressor of cytokine signaling 1
T749 92-100 UMLS/C1550655 denotes patients
T827 92-100 UMLS/C1705908 denotes patients
T836 36-70 UMLS/C1426208 denotes suppressor of cytokine signaling 1
T840 81-86 UMLS/C0007634 denotes cells
T877 7-17 UMLS/C1548180 denotes production
T879 231-235 UMLS/C1332709 denotes CD28
T876 171-178 UMLS/C0003320 denotes antigen
T844 231-235 UMLS/C1426202 denotes CD28
T826 179-187 UMLS/C1552740 denotes specific
T808 258-263 UMLS/C0243095 denotes found
T721 143-146 UMLS/C2348947 denotes has
T700 188-194 UMLS/C0039194 denotes T-cell
T698 179-187 UMLS/C0205369 denotes specific
T688 231-235 UMLS/C0075747 denotes CD28
T678 137-142 UMLS/C1149215 denotes IL-10
T612 137-142 UMLS/C1522550 denotes IL-10
T605 137-142 UMLS/C1334098 denotes IL-10
T596 195-203 UMLS/C1524094 denotes cytokine
T536 161-166 UMLS/C0332206 denotes block
T528 161-166 UMLS/C1706084 denotes block
T519 204-212 UMLS/C1704632 denotes response
T517 236-253 UMLS/C0086982 denotes signaling pathway
T515 161-166 UMLS/C1533157 denotes block
T461 161-166 UMLS/C0233660 denotes block
T442 195-203 UMLS/C0079189 denotes cytokine
T441 204-212 UMLS/C0871261 denotes response
T768 258-263 UMLS/C0037088 denotes found
T765 204-212 UMLS/C1706817 denotes response
T760 236-253 UMLS/C0037080 denotes signaling pathway
T731 216-226 UMLS/C0021469 denotes inhibiting
T495 137-142 UMLS/C0085295 denotes IL-10
T482 158-160 UMLS/C0319022 denotes to
T478 161-166 UMLS/C0028778 denotes block

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1159 1-6 NN denotes gamma
T1160 7-17 NN denotes production
T1161 18-21 CC denotes and
T1162 22-32 NN denotes expression
T1163 33-35 IN denotes of
T1164 36-46 NN denotes suppressor
T1165 47-49 IN denotes of
T1166 50-58 NN denotes cytokine
T1167 59-68 NN denotes signaling
T1168 69-70 CD denotes 1
T1169 71-73 IN denotes in
T1170 74-80 NN denotes CD4+ T
T1171 81-86 NN denotes cells
T1172 87-91 IN denotes from
T1173 92-100 NN denotes patients
T1174 101-105 IN denotes with
T1175 106-116 JJ denotes rheumatoid
T1176 117-126 NN denotes arthritis
T1197 269-279 JJ denotes peripheral
T1196 264-268 IN denotes that
T1195 258-263 VB denotes found
T1194 255-257 PRP denotes We
T1193 246-253 NN denotes pathway
T1192 236-245 NN denotes signaling
T1191 231-235 NN denotes CD28
T1190 227-230 DT denotes the
T1189 216-226 VB denotes inhibiting
T1188 213-215 IN denotes by
T1187 204-212 NN denotes response
T1186 195-203 NN denotes cytokine
T1185 188-194 NN denotes T-cell
T1184 171-187 JJ denotes antigen-specific
T1183 167-170 DT denotes the
T1182 161-166 VB denotes block
T1181 158-160 TO denotes to
T1180 152-157 VB denotes shown
T1179 147-151 VB denotes been
T1178 143-146 VB denotes has
T1177 137-142 NN denotes IL-10
R52 T1160 T1159 arg1Of production,gamma
R54 T1162 T1161 arg2Of expression,and
R55 T1162 T1163 arg1Of expression,of
R56 T1164 T1163 arg2Of suppressor,of
R57 T1164 T1165 arg1Of suppressor,of
R58 T1167 T1165 arg2Of signaling,of
R59 T1167 T1166 arg1Of signaling,cytokine
R60 T1167 T1168 arg1Of signaling,1
R61 T1171 T1169 arg2Of cells,in
R62 T1171 T1170 arg1Of cells,CD4+ T
R63 T1171 T1172 arg1Of cells,from
R64 T1173 T1172 arg2Of patients,from
R65 T1173 T1174 arg1Of patients,with
R66 T1176 T1174 arg2Of arthritis,with
R67 T1176 T1175 arg1Of arthritis,rheumatoid
R68 T1177 T1178 arg1Of IL-10,has
R69 T1177 T1179 arg1Of IL-10,been
R70 T1177 T1180 arg2Of IL-10,shown
R71 T1177 T1182 arg1Of IL-10,block
R72 T1177 T1189 arg1Of IL-10,inhibiting
R73 T1180 T1178 arg2Of shown,has
R74 T1180 T1179 arg2Of shown,been
R75 T1182 T1180 arg3Of block,shown
R76 T1182 T1181 arg1Of block,to
R77 T1182 T1188 arg1Of block,by
R78 T1187 T1182 arg2Of response,block
R79 T1187 T1183 arg1Of response,the
R80 T1187 T1184 arg1Of response,antigen-specific
R81 T1187 T1185 arg1Of response,T-cell
R82 T1187 T1186 arg1Of response,cytokine
R83 T1189 T1188 arg2Of inhibiting,by
R84 T1193 T1189 arg2Of pathway,inhibiting
R85 T1193 T1190 arg1Of pathway,the
R86 T1193 T1191 arg1Of pathway,CD28
R87 T1193 T1192 arg1Of pathway,signaling
R88 T1194 T1195 arg1Of We,found

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T969 36-70 Protein denotes suppressor of cytokine signaling 1
T970 74-77 Protein denotes CD4
T971 137-142 Protein denotes IL-10
T972 231-235 Protein denotes CD28

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1049 231-235 http://www.uniprot.org/uniprot/P10747 denotes CD28
T1030 137-142 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1040 74-77 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-BP

Id Subject Object Predicate Lexical cue
T898 59-68 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T906 236-253 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T905 195-212 http://purl.obolibrary.org/obo/GO_0034097 denotes cytokine response
T904 188-203 http://purl.obolibrary.org/obo/GO_0002369 denotes T-cell cytokine
T899 236-245 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

GO-CC

Id Subject Object Predicate Lexical cue
T1014 81-86 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T999 137-142 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

sentences

Id Subject Object Predicate Lexical cue
T883 137-254 Sentence denotes IL-10 has been shown to block the antigen-specific T-cell cytokine response by inhibiting the CD28 signaling pathway.
T2 128-136 Sentence denotes Abstract
T3 137-254 Sentence denotes IL-10 has been shown to block the antigen-specific T-cell cytokine response by inhibiting the CD28 signaling pathway.

ICD10

Id Subject Object Predicate Lexical cue
T1025 106-126 http://purl.bioontology.org/ontology/ICD10/M06.9 denotes rheumatoid arthritis
T1027 117-126 http://purl.bioontology.org/ontology/ICD10/M13.9 denotes arthritis

simple1

Id Subject Object Predicate Lexical cue
T1126 137-142 Protein denotes IL-10
T1127 231-235 Protein denotes CD28
T1124 36-70 Protein denotes suppressor of cytokine signaling 1
T1125 74-77 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1921 36-70 Protein denotes suppressor of cytokine signaling 1
T1922 74-77 Protein denotes CD4
T1951 22-32 Gene_expression denotes expression
T1952 7-17 Gene_expression denotes production
T1924 231-235 Protein denotes CD28
T1923 137-142 Protein denotes IL-10
R628 T1921 T1951 themeOf suppressor of cytokine signaling 1,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1417 36-70 Protein denotes suppressor of cytokine signaling 1
T1418 74-77 Protein denotes CD4
T1447 7-17 Gene_expression denotes production
T1448 22-32 Gene_expression denotes expression
T1420 231-235 Protein denotes CD28
T1419 137-142 Protein denotes IL-10
R318 T1417 T1448 themeOf suppressor of cytokine signaling 1,expression

DLUT931

Id Subject Object Predicate Lexical cue
T1462 36-70 Protein denotes suppressor of cytokine signaling 1
T1463 74-77 Protein denotes CD4
T1491 7-17 Gene_expression denotes production
T1492 22-32 Gene_expression denotes expression
T1465 231-235 Protein denotes CD28
T1464 137-142 Protein denotes IL-10
R333 T1462 T1492 themeOf suppressor of cytokine signaling 1,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1880 74-77 Protein denotes CD4
T1887 79-86 Entity denotes T cells
T1900 33-70 Protein denotes of suppressor of cytokine signaling 1
T1908 22-77 Gene_expression denotes expression of suppressor of cytokine signaling 1 in CD4
T1907 167-213 Localization denotes the antigen-specific T-cell cytokine response
T1905 171-187 Entity denotes antigen-specific
T1893 231-235 Protein denotes CD28
T1881 188-194 Entity denotes T-cell
T1871 167-212 Protein denotes the antigen-specific T-cell cytokine response
T1870 137-142 Protein denotes IL-10
R612 T1871 T1907 themeOf the antigen-specific T-cell cytokine response,the antigen-specific T-cell cytokine response
R617 T1881 T1907 locationOf T-cell,the antigen-specific T-cell cytokine response
R623 T1900 T1908 themeOf of suppressor of cytokine signaling 1,expression of suppressor of cytokine signaling 1 in CD4

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1564 74-77 CD denotes CD4
T1565 77-78 CD denotes +
T1566 79-80 NNP denotes T
T1567 81-86 NNS denotes cells
T1568 87-91 IN denotes from
T1569 92-100 NNS denotes patients
T1576 152-157 VBN denotes shown
T1553 1-6 NN denotes gamma
T1554 7-17 NN denotes production
T1555 18-21 CC denotes and
T1556 22-32 NN denotes expression
T1557 33-35 IN denotes of
T1558 36-46 NN denotes suppressor
T1559 47-49 IN denotes of
T1560 50-58 NN denotes cytokine
T1561 59-68 VBG denotes signaling
T1562 69-70 CD denotes 1
T1563 71-73 IN denotes in
T1570 101-105 IN denotes with
T1571 106-116 JJ denotes rheumatoid
T1572 117-126 NNS denotes arthritis
T1573 137-142 NNP denotes IL-10
T1574 143-146 VBZ denotes has
T1575 147-151 VBN denotes been
T1577 158-160 TO denotes to
T1578 161-166 VB denotes block
T1579 167-170 DT denotes the
T1580 171-187 JJ denotes antigen-specific
T1581 188-194 NN denotes T-cell
T1582 195-203 NN denotes cytokine
T1583 204-212 NN denotes response
T1584 213-215 IN denotes by
T1585 216-226 VBG denotes inhibiting
T1586 227-230 DT denotes the
T1587 231-235 NNP denotes CD28
T1588 236-245 VBG denotes signaling
T1589 246-253 NN denotes pathway
T1590 253-254 . denotes .
T1591 255-257 PRP denotes We
T1592 258-263 VBD denotes found
T1593 264-268 IN denotes that
T1594 269-279 JJ denotes peripheral
R367 T1564 T1563 pobj CD4,in
R368 T1565 T1567 nummod +,cells
R369 T1566 T1567 compound T,cells
R370 T1567 T1561 dobj cells,signaling
R371 T1568 T1567 prep from,cells
R372 T1569 T1568 pobj patients,from
R670 T1553 T1554 amod gamma,production
R672 T1555 T1554 cc and,production
R673 T1556 T1554 conj expression,production
R674 T1557 T1554 prep of,production
R675 T1558 T1557 pobj suppressor,of
R676 T1559 T1558 prep of,suppressor
R677 T1560 T1559 pobj cytokine,of
R679 T1562 T1561 dobj 1,signaling
R680 T1563 T1561 prep in,signaling
R681 T1570 T1569 prep with,patients
R682 T1571 T1572 compound rheumatoid,arthritis
R683 T1572 T1570 pobj arthritis,with
R684 T1573 T1576 nsubjpass IL-10,shown
R685 T1574 T1576 aux has,shown
R686 T1575 T1576 auxpass been,shown
R687 T1576 T1576 ROOT shown,shown
R688 T1577 T1578 aux to,block
R689 T1578 T1576 xcomp block,shown
R690 T1579 T1583 det the,response
R691 T1580 T1583 amod antigen-specific,response
R692 T1581 T1583 compound T-cell,response
R693 T1582 T1583 compound cytokine,response
R694 T1583 T1578 dobj response,block
R695 T1584 T1578 prep by,block
R696 T1585 T1584 pcomp inhibiting,by
R697 T1586 T1587 det the,CD28
R698 T1587 T1585 dobj CD28,inhibiting
R699 T1588 T1585 conj signaling,inhibiting
R700 T1589 T1588 dobj pathway,signaling
R701 T1590 T1576 punct .,shown
R702 T1591 T1592 nsubj We,found
R703 T1592 T1592 ROOT found,found

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1094 137-142 Protein denotes IL-10
T1095 231-235 Protein denotes CD28
T1096 216-226 Negative_regulation denotes inhibiting
T1091 74-77 Protein denotes CD4
T1092 7-17 Gene_expression denotes production
R653 T1094 T1096 causeOf IL-10,inhibiting
R654 T1095 T1096 themeOf CD28,inhibiting

testone

Id Subject Object Predicate Lexical cue
T34 36-70 Protein denotes suppressor of cytokine signaling 1
T35 74-77 Protein denotes CD4
T64 7-17 Gene_expression denotes production
T37 231-235 Protein denotes CD28
T36 137-142 Protein denotes IL-10