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PMC:1064873 / 423-673 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T431 201-210 OCCURRENCE denotes increased
T396 182-184 state denotes IL
T395 89-91 state denotes IL
T394 86-88 country_code denotes ml
T393 83-85 country_code denotes ng
T392 62-64 country_code denotes in
T196 235-241 NN denotes signal
T195 232-234 IN denotes of
T194 216-231 NN denotes phosphorylation
T193 212-215 DT denotes The
T192 210-211 . denotes .
T191 201-210 VBN denotes increased
T190 197-200 VBD denotes was
T189 188-196 NN denotes receptor
T188 185-187 CD denotes 10
T187 182-185 NNP denotes IL-
T186 180-181 CD denotes 1
T185 175-179 NN denotes type
T184 171-174 DT denotes the
T183 168-170 IN denotes of
T182 157-167 NN denotes expression
T181 149-156 NN denotes surface
T180 143-148 PRP$ denotes their
T179 134-142 IN denotes although
T178 132-133 , denotes ,
T177 127-132 NNS denotes cells
T176 125-126 NN denotes T
T175 123-124 NN denotes +
T174 122-123 CD denotes 4
T173 120-122 NNP denotes CD
T172 112-119 NN denotes control
T171 105-111 JJ denotes normal
T170 100-104 VBD denotes were
T169 95-99 IN denotes than
T168 92-94 CD denotes 10
T167 89-92 NNP denotes IL-
T166 86-88 NN denotes ml
T165 85-86 NN denotes /
T164 83-85 NN denotes ng
T163 81-82 CD denotes 1
T162 78-80 IN denotes of
T161 69-77 NN denotes presence
T160 65-68 DT denotes the
T159 62-64 IN denotes in
T158 48-61 NN denotes costimulation
T157 45-47 CD denotes 28
T156 43-45 NNP denotes CD
T155 39-42 CC denotes and
T154 37-38 CD denotes 3
T153 35-37 NNP denotes CD
T152 29-34 IN denotes after
T151 23-28 NN denotes gamma
T150 12-22 NN denotes interferon
T149 9-11 IN denotes of
T148 1-8 NNS denotes amounts

biosemtest

Id Subject Object Predicate Lexical cue
T880 43-47 UMLS/C1332709 denotes CD28
T873 12-28 UP/P01581 denotes interferon gamma
T867 83-88 UMLS/C0439275 denotes ng/ml
T861 1-8 UMLS/C1265611 denotes amounts
T859 12-28 UP/Q62574 denotes interferon gamma
T857 29-34 UMLS/C0231290 denotes after
T854 12-28 UP/Q7TSP4 denotes interferon gamma
T851 12-28 UP/Q8SPW9 denotes interferon gamma
T845 43-47 UMLS/C1426202 denotes CD28
T842 12-28 UP/P63311 denotes interferon gamma
T833 12-28 UP/P63309 denotes interferon gamma
T824 12-28 UP/P46402 denotes interferon gamma
T810 12-28 UP/P07353 denotes interferon gamma
T806 12-28 UP/Q647G2 denotes interferon gamma
T803 12-28 UP/Q865Y4 denotes interferon gamma
T794 12-28 UP/Q5CCK0 denotes interferon gamma
T791 12-28 UP/P28341 denotes interferon gamma
T786 12-28 UP/Q9TV67 denotes interferon gamma
T783 12-28 UP/O77763 denotes interferon gamma
T718 12-28 UP/A4PIZ9 denotes interferon gamma
T714 12-28 UP/Q25BC0 denotes interferon gamma
T711 12-28 UP/P01580 denotes interferon gamma
T709 201-210 UMLS/C0442805 denotes increased
T702 125-132 UMLS/C0039194 denotes T cells
T699 201-210 UMLS/C0442808 denotes increased
T696 12-28 UP/Q1WM28 denotes interferon gamma
T689 43-47 UMLS/C0075747 denotes CD28
T684 182-196 UMLS/C0247771 denotes IL-10 receptor
T679 89-94 UMLS/C1149215 denotes IL-10
T675 12-28 UP/O73915 denotes interferon gamma
T672 12-28 UP/Q9YGB9 denotes interferon gamma
T668 12-28 UP/P79154 denotes interferon gamma
T663 12-28 UP/P01579 denotes interferon gamma
T652 12-28 UP/P42162 denotes interferon gamma
T648 157-167 UMLS/C0185117 denotes expression
T645 12-28 UP/P17773 denotes interferon gamma
T641 12-28 UP/P42160 denotes interferon gamma
T635 12-28 UP/O57608 denotes interferon gamma
T628 12-28 UP/O57603 denotes interferon gamma
T623 12-28 UP/Q2PE75 denotes interferon gamma
T620 12-28 UP/Q8MKF5 denotes interferon gamma
T618 29-34 UMLS/C0687676 denotes after
T613 89-94 UMLS/C1522550 denotes IL-10
T606 89-94 UMLS/C1334098 denotes IL-10
T602 12-28 UP/P28333 denotes interferon gamma
T599 12-28 UP/Q866Y6 denotes interferon gamma
T592 12-28 UP/Q5I6S9 denotes interferon gamma
T589 105-119 UMLS/C2705716 denotes normal control
T587 12-28 UP/Q865W6 denotes interferon gamma
T580 69-77 UMLS/C0392148 denotes presence
T578 12-28 UP/P17803 denotes interferon gamma
T574 12-28 UMLS/C0021740 denotes interferon gamma
T570 12-28 UMLS/C0021745 denotes interferon gamma
T567 12-28 UP/Q9TTB0 denotes interferon gamma
T561 157-167 UMLS/C0017262 denotes expression
T546 35-38 UMLS/C0108779 denotes CD3
T525 149-156 UMLS/C0205148 denotes surface
T516 1-8 UMLS/C1561574 denotes amounts
T508 12-28 UP/Q865X1 denotes interferon gamma
T468 12-28 UP/P42161 denotes interferon gamma
T456 216-231 UMLS/C0031715 denotes phosphorylation
T779 12-28 UP/O57571 denotes interferon gamma
T776 201-210 UMLS/C0205217 denotes increased
T762 12-28 UP/O35735 denotes interferon gamma
T757 12-28 UP/P63310 denotes interferon gamma
T741 12-28 UP/P49708 denotes interferon gamma
T738 12-28 UP/Q9QXX2 denotes interferon gamma
T728 69-77 UMLS/C0150312 denotes presence
T727 35-38 UMLS/C2698592 denotes CD3
T724 12-28 UP/Q4ZH68 denotes interferon gamma
T502 12-28 UP/P30123 denotes interferon gamma
T496 89-94 UMLS/C0085295 denotes IL-10
T491 12-28 UP/O35497 denotes interferon gamma

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1255 235-241 NN denotes signal
T1254 232-234 IN denotes of
T1253 216-231 NN denotes phosphorylation
T1252 212-215 DT denotes The
T1251 201-210 VB denotes increased
T1250 197-200 VB denotes was
T1249 188-196 NN denotes receptor
T1248 182-187 NN denotes IL-10
T1247 180-181 CD denotes 1
T1246 175-179 NN denotes type
T1245 171-174 DT denotes the
T1244 168-170 IN denotes of
T1243 157-167 NN denotes expression
T1242 149-156 NN denotes surface
T1241 143-148 PRP-DOLLAR- denotes their
T1240 134-142 IN denotes although
T1239 132-133 -COMMA- denotes ,
T1238 127-132 NN denotes cells
T1237 125-126 NN denotes T
T1236 120-124 JJ denotes CD4+
T1235 112-119 NN denotes control
T1234 105-111 JJ denotes normal
T1233 100-104 VB denotes were
T1232 95-99 IN denotes than
T1231 89-94 NN denotes IL-10
T1230 83-88 NN denotes ng/ml
T1229 81-82 CD denotes 1
T1228 78-80 IN denotes of
T1227 69-77 NN denotes presence
T1226 65-68 DT denotes the
T1225 62-64 IN denotes in
T1224 48-61 NN denotes costimulation
T1223 43-47 NN denotes CD28
T1222 39-42 CC denotes and
T1221 35-38 NN denotes CD3
T1220 29-34 IN denotes after
T1219 23-28 NN denotes gamma
T1218 12-22 NN denotes interferon
T1217 9-11 IN denotes of
T1216 1-8 NN denotes amounts
R114 T1216 T1217 arg1Of amounts,of
R115 T1216 T1225 arg1Of amounts,in
R116 T1219 T1217 arg2Of gamma,of
R117 T1219 T1218 arg1Of gamma,interferon
R118 T1219 T1220 arg1Of gamma,after
R119 T1221 T1222 arg1Of CD3,and
R120 T1223 T1222 arg2Of CD28,and
R121 T1224 T1220 arg2Of costimulation,after
R122 T1224 T1221 arg1Of costimulation,CD3
R123 T1224 T1223 arg1Of costimulation,CD28
R124 T1227 T1225 arg2Of presence,in
R125 T1227 T1226 arg1Of presence,the
R126 T1227 T1228 arg1Of presence,of
R127 T1227 T1232 arg1Of presence,than
R128 T1229 T1230 arg1Of 1,ng/ml
R129 T1231 T1228 arg2Of IL-10,of
R130 T1231 T1229 arg1Of IL-10,1
R131 T1233 T1232 arg2Of were,than
R132 T1238 T1233 arg1Of cells,were
R133 T1238 T1234 arg1Of cells,normal
R134 T1238 T1235 arg1Of cells,control
R135 T1238 T1236 arg1Of cells,CD4+
R136 T1238 T1237 arg1Of cells,T
R137 T1243 T1241 arg1Of expression,their
R138 T1243 T1242 arg1Of expression,surface
R139 T1243 T1244 arg1Of expression,of
R140 T1243 T1250 arg1Of expression,was
R141 T1243 T1251 arg2Of expression,increased
R142 T1249 T1244 arg2Of receptor,of
R143 T1249 T1245 arg1Of receptor,the
R144 T1249 T1246 arg1Of receptor,type
R145 T1249 T1247 arg1Of receptor,1
R146 T1249 T1248 arg1Of receptor,IL-10
R147 T1251 T1240 arg2Of increased,although
R148 T1251 T1250 arg2Of increased,was
R149 T1253 T1252 arg1Of phosphorylation,The
R150 T1253 T1254 arg1Of phosphorylation,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T974 12-28 Protein denotes interferon gamma
T975 43-47 Protein denotes CD28
T976 89-94 Protein denotes IL-10
T977 120-123 Protein denotes CD4
T978 175-196 Protein denotes type 1 IL-10 receptor

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1053 35-38 http://www.uniprot.org/uniprot/P07766 denotes CD3
T1052 35-38 http://www.uniprot.org/uniprot/P04234 denotes CD3
T1051 35-38 http://www.uniprot.org/uniprot/P20963 denotes CD3
T1050 43-47 http://www.uniprot.org/uniprot/P10747 denotes CD28
T1085 35-38 http://www.uniprot.org/uniprot/P09693 denotes CD3
T1031 89-94 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1032 182-187 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1038 12-28 http://www.uniprot.org/uniprot/P01579 denotes interferon gamma
T1042 120-123 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-BP

Id Subject Object Predicate Lexical cue
T908 216-231 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T907 182-196 http://purl.obolibrary.org/obo/GO_0004920 denotes IL-10 receptor

GO-CC

Id Subject Object Predicate Lexical cue
T1016 127-132 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T1010 182-196 http://purl.obolibrary.org/obo/GO_0004920 denotes IL-10 receptor
T1009 180-184 http://purl.obolibrary.org/obo/GO_0005149 denotes 1 IL
T1007 12-28 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon gamma
T1001 182-187 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10
T1000 89-94 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

simple1

Id Subject Object Predicate Lexical cue
T1129 12-28 Protein denotes interferon gamma
T1130 43-47 Protein denotes CD28
T1131 89-94 Protein denotes IL-10
T1132 120-123 Protein denotes CD4
T1133 175-196 Protein denotes type 1 IL-10 receptor

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1930 43-47 Protein denotes CD28
T1929 12-28 Protein denotes interferon gamma
T1927 175-196 Protein denotes type 1 IL-10 receptor
T1926 120-123 Protein denotes CD4
T1925 89-94 Protein denotes IL-10
T1957 216-231 Phosphorylation denotes phosphorylation
T1954 157-167 Gene_expression denotes expression
T1953 201-210 Positive_regulation denotes increased
R629 T1927 T1954 themeOf type 1 IL-10 receptor,expression
R641 T1954 T1953 themeOf expression,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1453 216-231 Phosphorylation denotes phosphorylation
T1451 201-210 Positive_regulation denotes increased
T1449 157-167 Gene_expression denotes expression
T1426 43-47 Protein denotes CD28
T1425 12-28 Protein denotes interferon gamma
T1423 175-196 Protein denotes type 1 IL-10 receptor
T1422 120-123 Protein denotes CD4
T1421 89-94 Protein denotes IL-10
R319 T1423 T1449 themeOf type 1 IL-10 receptor,expression
R328 T1449 T1451 themeOf expression,increased

DLUT931

Id Subject Object Predicate Lexical cue
T1498 216-231 Phosphorylation denotes phosphorylation
T1497 201-210 Positive_regulation denotes increased
T1496 157-167 Gene_expression denotes expression
T1471 43-47 Protein denotes CD28
T1470 12-28 Protein denotes interferon gamma
T1468 175-196 Protein denotes type 1 IL-10 receptor
T1467 120-123 Protein denotes CD4
T1466 89-94 Protein denotes IL-10
R334 T1468 T1496 themeOf type 1 IL-10 receptor,expression
R347 T1496 T1497 themeOf expression,increased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1906 43-61 Positive_regulation denotes CD28 costimulation
T1904 168-196 Protein denotes of the type 1 IL-10 receptor
T1894 182-187 Protein denotes IL-10
T1891 35-38 Protein denotes CD3
T1889 125-132 Entity denotes T cells
T1886 12-22 Protein denotes interferon
T1885 43-47 Protein denotes CD28
T1875 120-123 Protein denotes CD4
T1867 168-196 Protein denotes of the type 1 IL-10 receptor
T1859 81-94 Protein denotes 1 ng/ml IL-10
R619 T1885 T1906 themeOf CD28,CD28 costimulation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1636 125-126 NNP denotes T
T1635 123-124 NNP denotes +
T1634 120-123 NNP denotes CD4
T1633 112-119 NN denotes control
T1632 105-111 JJ denotes normal
T1631 100-104 VBD denotes were
T1630 95-99 IN denotes than
T1629 89-94 NN denotes IL-10
T1628 83-88 NN denotes ng/ml
T1627 81-82 CD denotes 1
T1626 78-80 IN denotes of
T1625 69-77 NN denotes presence
T1624 65-68 DT denotes the
T1623 62-64 IN denotes in
T1622 48-61 NN denotes costimulation
T1621 43-47 NNP denotes CD28
T1620 39-42 CC denotes and
T1619 35-38 NNP denotes CD3
T1618 29-34 IN denotes after
T1617 23-28 NN denotes gamma
T1616 12-22 NN denotes interferon
T1615 9-11 IN denotes of
T1614 1-8 NNS denotes amounts
T1655 235-241 NN denotes signal
T1654 232-234 IN denotes of
T1653 216-231 NN denotes phosphorylation
T1652 212-215 DT denotes The
T1651 210-211 . denotes .
T1650 201-210 VBN denotes increased
T1649 197-200 VBD denotes was
T1648 188-196 NN denotes receptor
T1647 182-187 NN denotes IL-10
T1646 180-181 CD denotes 1
T1645 175-179 NN denotes type
T1644 171-174 DT denotes the
T1643 168-170 IN denotes of
T1642 157-167 NN denotes expression
T1641 149-156 NN denotes surface
T1640 143-148 PRP$ denotes their
T1639 134-142 IN denotes although
T1638 132-133 , denotes ,
T1637 127-132 NNS denotes cells
R388 T1615 T1614 prep of,amounts
R389 T1616 T1615 pobj interferon,of
R390 T1617 T1614 acl gamma,amounts
R391 T1618 T1617 prep after,gamma
R392 T1619 T1618 pobj CD3,after
R393 T1620 T1619 cc and,CD3
R394 T1621 T1622 compound CD28,costimulation
R395 T1622 T1619 conj costimulation,CD3
R396 T1623 T1622 prep in,costimulation
R397 T1624 T1625 det the,presence
R398 T1625 T1623 pobj presence,in
R399 T1626 T1625 prep of,presence
R400 T1627 T1629 nummod 1,IL-10
R401 T1628 T1629 compound ng/ml,IL-10
R402 T1629 T1626 pobj IL-10,of
R403 T1630 T1631 mark than,were
R404 T1631 T1614 advcl were,amounts
R405 T1632 T1633 amod normal,control
R406 T1633 T1631 attr control,were
R407 T1634 T1637 compound CD4,cells
R408 T1635 T1637 compound +,cells
R409 T1636 T1637 compound T,cells
R410 T1637 T1631 nsubj cells,were
R411 T1638 T1631 punct ",",were
R412 T1639 T1650 mark although,increased
R413 T1640 T1642 poss their,expression
R414 T1641 T1642 compound surface,expression
R415 T1642 T1650 nsubjpass expression,increased
R416 T1643 T1642 prep of,expression
R417 T1644 T1645 det the,type
R418 T1645 T1648 nmod type,receptor
R419 T1646 T1647 nummod 1,IL-10
R420 T1647 T1648 compound IL-10,receptor
R421 T1648 T1643 pobj receptor,of
R422 T1649 T1650 auxpass was,increased
R425 T1652 T1653 det The,phosphorylation
R427 T1654 T1653 prep of,phosphorylation

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1098 12-28 Protein denotes interferon gamma
T1099 35-38 Protein denotes CD3
T1100 43-47 Protein denotes CD28
T1101 120-124 Protein denotes CD4+
T1102 175-196 Protein denotes type 1 IL-10 receptor
T1105 1-8 Gene_expression denotes amounts
T1106 157-167 Gene_expression denotes expression
T1107 201-210 Positive_regulation denotes increased
R655 T1098 T1105 themeOf interferon gamma,amounts
R658 T1102 T1106 themeOf type 1 IL-10 receptor,expression
R659 T1106 T1107 themeOf expression,increased

testone

Id Subject Object Predicate Lexical cue
T67 201-210 Positive_regulation denotes increased
T66 157-167 Gene_expression denotes expression
T43 175-196 Protein denotes type 1 IL-10 receptor
T42 120-123 Protein denotes CD4
T41 89-94 Protein denotes IL-10
T40 43-47 Protein denotes CD28
T39 12-28 Protein denotes interferon gamma
R5 T43 T66 themeOf type 1 IL-10 receptor,expression
R13 T66 T67 themeOf expression,increased