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PMC:1064873 / 406-562 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T419 2-9 OCCURRENCE denotes produce
T395 106-108 state denotes IL
T394 103-105 country_code denotes ml
T393 100-102 country_code denotes ng
T392 79-81 country_code denotes in
T178 149-150 , denotes ,
T177 144-149 NNS denotes cells
T176 142-143 NN denotes T
T175 140-141 NN denotes +
T174 139-140 CD denotes 4
T173 137-139 NNP denotes CD
T172 129-136 NN denotes control
T171 122-128 JJ denotes normal
T170 117-121 VBD denotes were
T169 112-116 IN denotes than
T168 109-111 CD denotes 10
T167 106-109 NNP denotes IL-
T166 103-105 NN denotes ml
T165 102-103 NN denotes /
T164 100-102 NN denotes ng
T163 98-99 CD denotes 1
T162 95-97 IN denotes of
T161 86-94 NN denotes presence
T160 82-85 DT denotes the
T159 79-81 IN denotes in
T158 65-78 NN denotes costimulation
T157 62-64 CD denotes 28
T156 60-62 NNP denotes CD
T155 56-59 CC denotes and
T154 54-55 CD denotes 3
T153 52-54 NNP denotes CD
T152 46-51 IN denotes after
T151 40-45 NN denotes gamma
T150 29-39 NN denotes interferon
T149 26-28 IN denotes of
T148 18-25 NNS denotes amounts
T147 10-17 JJR denotes greater
T146 2-9 VB denotes produce

biosemtest

Id Subject Object Predicate Lexical cue
T880 60-64 UMLS/C1332709 denotes CD28
T873 29-45 UP/P01581 denotes interferon gamma
T867 100-105 UMLS/C0439275 denotes ng/ml
T861 18-25 UMLS/C1265611 denotes amounts
T859 29-45 UP/Q62574 denotes interferon gamma
T857 46-51 UMLS/C0231290 denotes after
T854 29-45 UP/Q7TSP4 denotes interferon gamma
T851 29-45 UP/Q8SPW9 denotes interferon gamma
T845 60-64 UMLS/C1426202 denotes CD28
T842 29-45 UP/P63311 denotes interferon gamma
T833 29-45 UP/P63309 denotes interferon gamma
T824 29-45 UP/P46402 denotes interferon gamma
T810 29-45 UP/P07353 denotes interferon gamma
T806 29-45 UP/Q647G2 denotes interferon gamma
T803 29-45 UP/Q865Y4 denotes interferon gamma
T794 29-45 UP/Q5CCK0 denotes interferon gamma
T791 29-45 UP/P28341 denotes interferon gamma
T788 10-17 UMLS/C1704243 denotes greater
T786 29-45 UP/Q9TV67 denotes interferon gamma
T783 29-45 UP/O77763 denotes interferon gamma
T722 10-17 UMLS/C0205393 denotes greater
T718 29-45 UP/A4PIZ9 denotes interferon gamma
T714 29-45 UP/Q25BC0 denotes interferon gamma
T711 29-45 UP/P01580 denotes interferon gamma
T702 142-149 UMLS/C0039194 denotes T cells
T696 29-45 UP/Q1WM28 denotes interferon gamma
T689 60-64 UMLS/C0075747 denotes CD28
T679 106-111 UMLS/C1149215 denotes IL-10
T675 29-45 UP/O73915 denotes interferon gamma
T672 29-45 UP/Q9YGB9 denotes interferon gamma
T668 29-45 UP/P79154 denotes interferon gamma
T663 29-45 UP/P01579 denotes interferon gamma
T652 29-45 UP/P42162 denotes interferon gamma
T645 29-45 UP/P17773 denotes interferon gamma
T641 29-45 UP/P42160 denotes interferon gamma
T635 29-45 UP/O57608 denotes interferon gamma
T628 29-45 UP/O57603 denotes interferon gamma
T623 29-45 UP/Q2PE75 denotes interferon gamma
T620 29-45 UP/Q8MKF5 denotes interferon gamma
T618 46-51 UMLS/C0687676 denotes after
T613 106-111 UMLS/C1522550 denotes IL-10
T606 106-111 UMLS/C1334098 denotes IL-10
T602 29-45 UP/P28333 denotes interferon gamma
T599 29-45 UP/Q866Y6 denotes interferon gamma
T592 29-45 UP/Q5I6S9 denotes interferon gamma
T589 122-136 UMLS/C2705716 denotes normal control
T587 29-45 UP/Q865W6 denotes interferon gamma
T580 86-94 UMLS/C0392148 denotes presence
T578 29-45 UP/P17803 denotes interferon gamma
T574 29-45 UMLS/C0021740 denotes interferon gamma
T570 29-45 UMLS/C0021745 denotes interferon gamma
T567 29-45 UP/Q9TTB0 denotes interferon gamma
T546 52-55 UMLS/C0108779 denotes CD3
T516 18-25 UMLS/C1561574 denotes amounts
T508 29-45 UP/Q865X1 denotes interferon gamma
T468 29-45 UP/P42161 denotes interferon gamma
T439 10-17 UMLS/C0549177 denotes greater
T779 29-45 UP/O57571 denotes interferon gamma
T762 29-45 UP/O35735 denotes interferon gamma
T757 29-45 UP/P63310 denotes interferon gamma
T741 29-45 UP/P49708 denotes interferon gamma
T738 29-45 UP/Q9QXX2 denotes interferon gamma
T728 86-94 UMLS/C0150312 denotes presence
T727 52-55 UMLS/C2698592 denotes CD3
T724 29-45 UP/Q4ZH68 denotes interferon gamma
T502 29-45 UP/P30123 denotes interferon gamma
T496 106-111 UMLS/C0085295 denotes IL-10
T491 29-45 UP/O35497 denotes interferon gamma

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1239 149-150 -COMMA- denotes ,
T1238 144-149 NN denotes cells
T1237 142-143 NN denotes T
T1236 137-141 JJ denotes CD4+
T1235 129-136 NN denotes control
T1234 122-128 JJ denotes normal
T1233 117-121 VB denotes were
T1232 112-116 IN denotes than
T1231 106-111 NN denotes IL-10
T1230 100-105 NN denotes ng/ml
T1229 98-99 CD denotes 1
T1228 95-97 IN denotes of
T1227 86-94 NN denotes presence
T1226 82-85 DT denotes the
T1225 79-81 IN denotes in
T1224 65-78 NN denotes costimulation
T1223 60-64 NN denotes CD28
T1222 56-59 CC denotes and
T1221 52-55 NN denotes CD3
T1220 46-51 IN denotes after
T1219 40-45 NN denotes gamma
T1218 29-39 NN denotes interferon
T1217 26-28 IN denotes of
T1216 18-25 NN denotes amounts
T1215 10-17 JJ denotes greater
T1214 2-9 VB denotes produce
R110 T1214 T1239 arg1Of produce,","
R112 T1216 T1214 arg2Of amounts,produce
R113 T1216 T1215 arg1Of amounts,greater
R114 T1216 T1217 arg1Of amounts,of
R115 T1216 T1225 arg1Of amounts,in
R116 T1219 T1217 arg2Of gamma,of
R117 T1219 T1218 arg1Of gamma,interferon
R118 T1219 T1220 arg1Of gamma,after
R119 T1221 T1222 arg1Of CD3,and
R120 T1223 T1222 arg2Of CD28,and
R121 T1224 T1220 arg2Of costimulation,after
R122 T1224 T1221 arg1Of costimulation,CD3
R123 T1224 T1223 arg1Of costimulation,CD28
R124 T1227 T1225 arg2Of presence,in
R125 T1227 T1226 arg1Of presence,the
R126 T1227 T1228 arg1Of presence,of
R127 T1227 T1232 arg1Of presence,than
R128 T1229 T1230 arg1Of 1,ng/ml
R129 T1231 T1228 arg2Of IL-10,of
R130 T1231 T1229 arg1Of IL-10,1
R131 T1233 T1232 arg2Of were,than
R132 T1238 T1233 arg1Of cells,were
R133 T1238 T1234 arg1Of cells,normal
R134 T1238 T1235 arg1Of cells,control
R135 T1238 T1236 arg1Of cells,CD4+
R136 T1238 T1237 arg1Of cells,T

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T974 29-45 Protein denotes interferon gamma
T975 60-64 Protein denotes CD28
T976 106-111 Protein denotes IL-10
T977 137-140 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1053 52-55 http://www.uniprot.org/uniprot/P07766 denotes CD3
T1052 52-55 http://www.uniprot.org/uniprot/P04234 denotes CD3
T1051 52-55 http://www.uniprot.org/uniprot/P20963 denotes CD3
T1050 60-64 http://www.uniprot.org/uniprot/P10747 denotes CD28
T1085 52-55 http://www.uniprot.org/uniprot/P09693 denotes CD3
T1031 106-111 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1038 29-45 http://www.uniprot.org/uniprot/P01579 denotes interferon gamma
T1042 137-140 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-CC

Id Subject Object Predicate Lexical cue
T1016 144-149 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T1007 29-45 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon gamma
T1000 106-111 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

simple1

Id Subject Object Predicate Lexical cue
T1129 29-45 Protein denotes interferon gamma
T1130 60-64 Protein denotes CD28
T1131 106-111 Protein denotes IL-10
T1132 137-140 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1930 60-64 Protein denotes CD28
T1929 29-45 Protein denotes interferon gamma
T1926 137-140 Protein denotes CD4
T1925 106-111 Protein denotes IL-10
T1955 2-9 Gene_expression denotes produce
R630 T1929 T1955 themeOf interferon gamma,produce

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1450 2-9 Gene_expression denotes produce
T1426 60-64 Protein denotes CD28
T1425 29-45 Protein denotes interferon gamma
T1422 137-140 Protein denotes CD4
T1421 106-111 Protein denotes IL-10
R320 T1425 T1450 themeOf interferon gamma,produce

DLUT931

Id Subject Object Predicate Lexical cue
T1495 2-9 Gene_expression denotes produce
T1471 60-64 Protein denotes CD28
T1470 29-45 Protein denotes interferon gamma
T1467 137-140 Protein denotes CD4
T1466 106-111 Protein denotes IL-10
R335 T1470 T1495 themeOf interferon gamma,produce
R336 T1471 T1495 themeOf CD28,produce

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1906 60-78 Positive_regulation denotes CD28 costimulation
T1891 52-55 Protein denotes CD3
T1889 142-149 Entity denotes T cells
T1886 29-39 Protein denotes interferon
T1885 60-64 Protein denotes CD28
T1875 137-140 Protein denotes CD4
T1859 98-111 Protein denotes 1 ng/ml IL-10
R619 T1885 T1906 themeOf CD28,CD28 costimulation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1636 142-143 NNP denotes T
T1635 140-141 NNP denotes +
T1634 137-140 NNP denotes CD4
T1633 129-136 NN denotes control
T1632 122-128 JJ denotes normal
T1631 117-121 VBD denotes were
T1630 112-116 IN denotes than
T1629 106-111 NN denotes IL-10
T1628 100-105 NN denotes ng/ml
T1627 98-99 CD denotes 1
T1626 95-97 IN denotes of
T1625 86-94 NN denotes presence
T1624 82-85 DT denotes the
T1623 79-81 IN denotes in
T1622 65-78 NN denotes costimulation
T1621 60-64 NNP denotes CD28
T1620 56-59 CC denotes and
T1619 52-55 NNP denotes CD3
T1618 46-51 IN denotes after
T1617 40-45 NN denotes gamma
T1616 29-39 NN denotes interferon
T1615 26-28 IN denotes of
T1614 18-25 NNS denotes amounts
T1613 10-17 JJR denotes greater
T1612 2-9 VB denotes produce
T1638 149-150 , denotes ,
T1637 144-149 NNS denotes cells
R386 T1613 T1614 amod greater,amounts
R387 T1614 T1612 dobj amounts,produce
R388 T1615 T1614 prep of,amounts
R389 T1616 T1615 pobj interferon,of
R390 T1617 T1614 acl gamma,amounts
R391 T1618 T1617 prep after,gamma
R392 T1619 T1618 pobj CD3,after
R393 T1620 T1619 cc and,CD3
R394 T1621 T1622 compound CD28,costimulation
R395 T1622 T1619 conj costimulation,CD3
R396 T1623 T1622 prep in,costimulation
R397 T1624 T1625 det the,presence
R398 T1625 T1623 pobj presence,in
R399 T1626 T1625 prep of,presence
R400 T1627 T1629 nummod 1,IL-10
R401 T1628 T1629 compound ng/ml,IL-10
R402 T1629 T1626 pobj IL-10,of
R403 T1630 T1631 mark than,were
R404 T1631 T1614 advcl were,amounts
R405 T1632 T1633 amod normal,control
R406 T1633 T1631 attr control,were
R407 T1634 T1637 compound CD4,cells
R408 T1635 T1637 compound +,cells
R409 T1636 T1637 compound T,cells
R410 T1637 T1631 nsubj cells,were
R411 T1638 T1631 punct ",",were

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1098 29-45 Protein denotes interferon gamma
T1099 52-55 Protein denotes CD3
T1100 60-64 Protein denotes CD28
T1101 137-141 Protein denotes CD4+
T1103 2-9 Gene_expression denotes produce
T1104 2-9 Gene_expression denotes produce
T1105 18-25 Gene_expression denotes amounts
R655 T1098 T1105 themeOf interferon gamma,amounts
R656 T1099 T1103 themeOf CD3,produce
R657 T1100 T1104 themeOf CD28,produce

testone

Id Subject Object Predicate Lexical cue
T65 2-9 Gene_expression denotes produce
T42 137-140 Protein denotes CD4
T41 106-111 Protein denotes IL-10
T40 60-64 Protein denotes CD28
T39 29-45 Protein denotes interferon gamma
R2 T39 T65 themeOf interferon gamma,produce
R4 T41 T65 themeOf IL-10,produce
R3 T40 T65 themeOf CD28,produce