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PMC:1064873 / 392-580 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T419 16-23 OCCURRENCE denotes produce
T395 120-122 state denotes IL
T394 117-119 country_code denotes ml
T393 114-116 country_code denotes ng
T392 93-95 country_code denotes in
T391 13-15 country_code denotes to
T181 180-187 NN denotes surface
T180 174-179 PRP$ denotes their
T179 165-173 IN denotes although
T178 163-164 , denotes ,
T177 158-163 NNS denotes cells
T176 156-157 NN denotes T
T175 154-155 NN denotes +
T174 153-154 CD denotes 4
T173 151-153 NNP denotes CD
T172 143-150 NN denotes control
T171 136-142 JJ denotes normal
T170 131-135 VBD denotes were
T169 126-130 IN denotes than
T168 123-125 CD denotes 10
T167 120-123 NNP denotes IL-
T166 117-119 NN denotes ml
T165 116-117 NN denotes /
T164 114-116 NN denotes ng
T163 112-113 CD denotes 1
T162 109-111 IN denotes of
T161 100-108 NN denotes presence
T160 96-99 DT denotes the
T159 93-95 IN denotes in
T158 79-92 NN denotes costimulation
T157 76-78 CD denotes 28
T156 74-76 NNP denotes CD
T155 70-73 CC denotes and
T154 68-69 CD denotes 3
T153 66-68 NNP denotes CD
T152 60-65 IN denotes after
T151 54-59 NN denotes gamma
T150 43-53 NN denotes interferon
T149 40-42 IN denotes of
T148 32-39 NNS denotes amounts
T147 24-31 JJR denotes greater
T146 16-23 VB denotes produce
T145 13-15 TO denotes to
T144 8-12 JJ denotes able
T143 3-7 VBD denotes were
T142 1-2 ) denotes )

biosemtest

Id Subject Object Predicate Lexical cue
T880 74-78 UMLS/C1332709 denotes CD28
T873 43-59 UP/P01581 denotes interferon gamma
T867 114-119 UMLS/C0439275 denotes ng/ml
T861 32-39 UMLS/C1265611 denotes amounts
T859 43-59 UP/Q62574 denotes interferon gamma
T857 60-65 UMLS/C0231290 denotes after
T854 43-59 UP/Q7TSP4 denotes interferon gamma
T851 43-59 UP/Q8SPW9 denotes interferon gamma
T845 74-78 UMLS/C1426202 denotes CD28
T842 43-59 UP/P63311 denotes interferon gamma
T833 43-59 UP/P63309 denotes interferon gamma
T824 43-59 UP/P46402 denotes interferon gamma
T810 43-59 UP/P07353 denotes interferon gamma
T806 43-59 UP/Q647G2 denotes interferon gamma
T803 43-59 UP/Q865Y4 denotes interferon gamma
T794 43-59 UP/Q5CCK0 denotes interferon gamma
T791 43-59 UP/P28341 denotes interferon gamma
T788 24-31 UMLS/C1704243 denotes greater
T786 43-59 UP/Q9TV67 denotes interferon gamma
T783 43-59 UP/O77763 denotes interferon gamma
T722 24-31 UMLS/C0205393 denotes greater
T718 43-59 UP/A4PIZ9 denotes interferon gamma
T714 43-59 UP/Q25BC0 denotes interferon gamma
T711 43-59 UP/P01580 denotes interferon gamma
T702 156-163 UMLS/C0039194 denotes T cells
T696 43-59 UP/Q1WM28 denotes interferon gamma
T689 74-78 UMLS/C0075747 denotes CD28
T679 120-125 UMLS/C1149215 denotes IL-10
T675 43-59 UP/O73915 denotes interferon gamma
T672 43-59 UP/Q9YGB9 denotes interferon gamma
T668 43-59 UP/P79154 denotes interferon gamma
T663 43-59 UP/P01579 denotes interferon gamma
T652 43-59 UP/P42162 denotes interferon gamma
T645 43-59 UP/P17773 denotes interferon gamma
T641 43-59 UP/P42160 denotes interferon gamma
T635 43-59 UP/O57608 denotes interferon gamma
T632 8-12 UMLS/C0085732 denotes able
T628 43-59 UP/O57603 denotes interferon gamma
T623 43-59 UP/Q2PE75 denotes interferon gamma
T620 43-59 UP/Q8MKF5 denotes interferon gamma
T618 60-65 UMLS/C0687676 denotes after
T613 120-125 UMLS/C1522550 denotes IL-10
T606 120-125 UMLS/C1334098 denotes IL-10
T602 43-59 UP/P28333 denotes interferon gamma
T599 43-59 UP/Q866Y6 denotes interferon gamma
T592 43-59 UP/Q5I6S9 denotes interferon gamma
T589 136-150 UMLS/C2705716 denotes normal control
T587 43-59 UP/Q865W6 denotes interferon gamma
T580 100-108 UMLS/C0392148 denotes presence
T578 43-59 UP/P17803 denotes interferon gamma
T574 43-59 UMLS/C0021740 denotes interferon gamma
T572 8-12 UMLS/C1299581 denotes able
T570 43-59 UMLS/C0021745 denotes interferon gamma
T567 43-59 UP/Q9TTB0 denotes interferon gamma
T546 66-69 UMLS/C0108779 denotes CD3
T525 180-187 UMLS/C0205148 denotes surface
T516 32-39 UMLS/C1561574 denotes amounts
T508 43-59 UP/Q865X1 denotes interferon gamma
T468 43-59 UP/P42161 denotes interferon gamma
T439 24-31 UMLS/C0549177 denotes greater
T779 43-59 UP/O57571 denotes interferon gamma
T762 43-59 UP/O35735 denotes interferon gamma
T757 43-59 UP/P63310 denotes interferon gamma
T741 43-59 UP/P49708 denotes interferon gamma
T738 43-59 UP/Q9QXX2 denotes interferon gamma
T728 100-108 UMLS/C0150312 denotes presence
T727 66-69 UMLS/C2698592 denotes CD3
T724 43-59 UP/Q4ZH68 denotes interferon gamma
T502 43-59 UP/P30123 denotes interferon gamma
T496 120-125 UMLS/C0085295 denotes IL-10
T491 43-59 UP/O35497 denotes interferon gamma
T483 13-15 UMLS/C0319022 denotes to

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1242 180-187 NN denotes surface
T1241 174-179 PRP-DOLLAR- denotes their
T1240 165-173 IN denotes although
T1239 163-164 -COMMA- denotes ,
T1238 158-163 NN denotes cells
T1237 156-157 NN denotes T
T1236 151-155 JJ denotes CD4+
T1235 143-150 NN denotes control
T1234 136-142 JJ denotes normal
T1233 131-135 VB denotes were
T1232 126-130 IN denotes than
T1231 120-125 NN denotes IL-10
T1230 114-119 NN denotes ng/ml
T1229 112-113 CD denotes 1
T1228 109-111 IN denotes of
T1227 100-108 NN denotes presence
T1226 96-99 DT denotes the
T1225 93-95 IN denotes in
T1224 79-92 NN denotes costimulation
T1223 74-78 NN denotes CD28
T1222 70-73 CC denotes and
T1221 66-69 NN denotes CD3
T1220 60-65 IN denotes after
T1219 54-59 NN denotes gamma
T1218 43-53 NN denotes interferon
T1217 40-42 IN denotes of
T1216 32-39 NN denotes amounts
T1215 24-31 JJ denotes greater
T1214 16-23 VB denotes produce
T1213 13-15 TO denotes to
T1212 8-12 JJ denotes able
T1211 3-7 VB denotes were
T1210 1-2 -RRB- denotes )
R107 T1212 T1211 arg2Of able,were
R108 T1214 T1212 arg2Of produce,able
R109 T1214 T1213 arg1Of produce,to
R110 T1214 T1239 arg1Of produce,","
R111 T1214 T1240 arg1Of produce,although
R112 T1216 T1214 arg2Of amounts,produce
R113 T1216 T1215 arg1Of amounts,greater
R114 T1216 T1217 arg1Of amounts,of
R115 T1216 T1225 arg1Of amounts,in
R116 T1219 T1217 arg2Of gamma,of
R117 T1219 T1218 arg1Of gamma,interferon
R118 T1219 T1220 arg1Of gamma,after
R119 T1221 T1222 arg1Of CD3,and
R120 T1223 T1222 arg2Of CD28,and
R121 T1224 T1220 arg2Of costimulation,after
R122 T1224 T1221 arg1Of costimulation,CD3
R123 T1224 T1223 arg1Of costimulation,CD28
R124 T1227 T1225 arg2Of presence,in
R125 T1227 T1226 arg1Of presence,the
R126 T1227 T1228 arg1Of presence,of
R127 T1227 T1232 arg1Of presence,than
R128 T1229 T1230 arg1Of 1,ng/ml
R129 T1231 T1228 arg2Of IL-10,of
R130 T1231 T1229 arg1Of IL-10,1
R131 T1233 T1232 arg2Of were,than
R132 T1238 T1233 arg1Of cells,were
R133 T1238 T1234 arg1Of cells,normal
R134 T1238 T1235 arg1Of cells,control
R135 T1238 T1236 arg1Of cells,CD4+
R136 T1238 T1237 arg1Of cells,T

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T974 43-59 Protein denotes interferon gamma
T975 74-78 Protein denotes CD28
T976 120-125 Protein denotes IL-10
T977 151-154 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1053 66-69 http://www.uniprot.org/uniprot/P07766 denotes CD3
T1052 66-69 http://www.uniprot.org/uniprot/P04234 denotes CD3
T1051 66-69 http://www.uniprot.org/uniprot/P20963 denotes CD3
T1050 74-78 http://www.uniprot.org/uniprot/P10747 denotes CD28
T1085 66-69 http://www.uniprot.org/uniprot/P09693 denotes CD3
T1031 120-125 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1038 43-59 http://www.uniprot.org/uniprot/P01579 denotes interferon gamma
T1042 151-154 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-CC

Id Subject Object Predicate Lexical cue
T1016 158-163 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T1007 43-59 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon gamma
T1000 120-125 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

simple1

Id Subject Object Predicate Lexical cue
T1129 43-59 Protein denotes interferon gamma
T1130 74-78 Protein denotes CD28
T1131 120-125 Protein denotes IL-10
T1132 151-154 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1930 74-78 Protein denotes CD28
T1929 43-59 Protein denotes interferon gamma
T1926 151-154 Protein denotes CD4
T1925 120-125 Protein denotes IL-10
T1955 16-23 Gene_expression denotes produce
R630 T1929 T1955 themeOf interferon gamma,produce

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1450 16-23 Gene_expression denotes produce
T1426 74-78 Protein denotes CD28
T1425 43-59 Protein denotes interferon gamma
T1422 151-154 Protein denotes CD4
T1421 120-125 Protein denotes IL-10
R320 T1425 T1450 themeOf interferon gamma,produce

DLUT931

Id Subject Object Predicate Lexical cue
T1495 16-23 Gene_expression denotes produce
T1471 74-78 Protein denotes CD28
T1470 43-59 Protein denotes interferon gamma
T1467 151-154 Protein denotes CD4
T1466 120-125 Protein denotes IL-10
R335 T1470 T1495 themeOf interferon gamma,produce
R336 T1471 T1495 themeOf CD28,produce

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1906 74-92 Positive_regulation denotes CD28 costimulation
T1891 66-69 Protein denotes CD3
T1889 156-163 Entity denotes T cells
T1886 43-53 Protein denotes interferon
T1885 74-78 Protein denotes CD28
T1875 151-154 Protein denotes CD4
T1859 112-125 Protein denotes 1 ng/ml IL-10
R619 T1885 T1906 themeOf CD28,CD28 costimulation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1636 156-157 NNP denotes T
T1635 154-155 NNP denotes +
T1634 151-154 NNP denotes CD4
T1633 143-150 NN denotes control
T1632 136-142 JJ denotes normal
T1631 131-135 VBD denotes were
T1630 126-130 IN denotes than
T1629 120-125 NN denotes IL-10
T1628 114-119 NN denotes ng/ml
T1627 112-113 CD denotes 1
T1626 109-111 IN denotes of
T1625 100-108 NN denotes presence
T1624 96-99 DT denotes the
T1623 93-95 IN denotes in
T1622 79-92 NN denotes costimulation
T1621 74-78 NNP denotes CD28
T1620 70-73 CC denotes and
T1619 66-69 NNP denotes CD3
T1618 60-65 IN denotes after
T1617 54-59 NN denotes gamma
T1616 43-53 NN denotes interferon
T1615 40-42 IN denotes of
T1614 32-39 NNS denotes amounts
T1613 24-31 JJR denotes greater
T1612 16-23 VB denotes produce
T1611 13-15 TO denotes to
T1610 8-12 JJ denotes able
T1609 3-7 VBD denotes were
T1608 1-2 -RRB- denotes )
T1641 180-187 NN denotes surface
T1640 174-179 PRP$ denotes their
T1639 165-173 IN denotes although
T1638 163-164 , denotes ,
T1637 158-163 NNS denotes cells
R383 T1610 T1609 acomp able,were
R384 T1611 T1612 aux to,produce
R385 T1612 T1610 xcomp produce,able
R386 T1613 T1614 amod greater,amounts
R387 T1614 T1612 dobj amounts,produce
R388 T1615 T1614 prep of,amounts
R389 T1616 T1615 pobj interferon,of
R390 T1617 T1614 acl gamma,amounts
R391 T1618 T1617 prep after,gamma
R392 T1619 T1618 pobj CD3,after
R393 T1620 T1619 cc and,CD3
R394 T1621 T1622 compound CD28,costimulation
R395 T1622 T1619 conj costimulation,CD3
R396 T1623 T1622 prep in,costimulation
R397 T1624 T1625 det the,presence
R398 T1625 T1623 pobj presence,in
R399 T1626 T1625 prep of,presence
R400 T1627 T1629 nummod 1,IL-10
R401 T1628 T1629 compound ng/ml,IL-10
R402 T1629 T1626 pobj IL-10,of
R403 T1630 T1631 mark than,were
R404 T1631 T1614 advcl were,amounts
R405 T1632 T1633 amod normal,control
R406 T1633 T1631 attr control,were
R407 T1634 T1637 compound CD4,cells
R408 T1635 T1637 compound +,cells
R409 T1636 T1637 compound T,cells
R410 T1637 T1631 nsubj cells,were
R411 T1638 T1631 punct ",",were

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1098 43-59 Protein denotes interferon gamma
T1099 66-69 Protein denotes CD3
T1100 74-78 Protein denotes CD28
T1101 151-155 Protein denotes CD4+
T1103 16-23 Gene_expression denotes produce
T1104 16-23 Gene_expression denotes produce
T1105 32-39 Gene_expression denotes amounts
R655 T1098 T1105 themeOf interferon gamma,amounts
R656 T1099 T1103 themeOf CD3,produce
R657 T1100 T1104 themeOf CD28,produce

testone

Id Subject Object Predicate Lexical cue
T65 16-23 Gene_expression denotes produce
T42 151-154 Protein denotes CD4
T41 120-125 Protein denotes IL-10
T40 74-78 Protein denotes CD28
T39 43-59 Protein denotes interferon gamma
R2 T39 T65 themeOf interferon gamma,produce
R4 T41 T65 themeOf IL-10,produce
R3 T40 T65 themeOf CD28,produce