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PMC:1064873 / 356-476 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T419 52-59 OCCURRENCE denotes produce
T391 49-51 country_code denotes to
T157 112-114 CD denotes 28
T156 110-112 NNP denotes CD
T155 106-109 CC denotes and
T154 104-105 CD denotes 3
T153 102-104 NNP denotes CD
T152 96-101 IN denotes after
T151 90-95 NN denotes gamma
T150 79-89 NN denotes interferon
T149 76-78 IN denotes of
T148 68-75 NNS denotes amounts
T147 60-67 JJR denotes greater
T146 52-59 VB denotes produce
T145 49-51 TO denotes to
T144 44-48 JJ denotes able
T143 39-43 VBD denotes were
T142 37-38 ) denotes )
T141 35-37 NNP denotes RA
T140 34-35 ( denotes (
T139 24-33 NN denotes arthritis
T138 13-23 NN denotes rheumatoid
T137 6-12 JJ denotes active
T136 1-5 IN denotes with

biosemtest

Id Subject Object Predicate Lexical cue
T880 110-114 UMLS/C1332709 denotes CD28
T873 79-95 UP/P01581 denotes interferon gamma
T861 68-75 UMLS/C1265611 denotes amounts
T859 79-95 UP/Q62574 denotes interferon gamma
T857 96-101 UMLS/C0231290 denotes after
T854 79-95 UP/Q7TSP4 denotes interferon gamma
T851 79-95 UP/Q8SPW9 denotes interferon gamma
T845 110-114 UMLS/C1426202 denotes CD28
T842 79-95 UP/P63311 denotes interferon gamma
T833 79-95 UP/P63309 denotes interferon gamma
T824 79-95 UP/P46402 denotes interferon gamma
T810 79-95 UP/P07353 denotes interferon gamma
T806 79-95 UP/Q647G2 denotes interferon gamma
T803 79-95 UP/Q865Y4 denotes interferon gamma
T794 79-95 UP/Q5CCK0 denotes interferon gamma
T791 79-95 UP/P28341 denotes interferon gamma
T788 60-67 UMLS/C1704243 denotes greater
T786 79-95 UP/Q9TV67 denotes interferon gamma
T783 79-95 UP/O77763 denotes interferon gamma
T722 60-67 UMLS/C0205393 denotes greater
T718 79-95 UP/A4PIZ9 denotes interferon gamma
T716 6-12 UMLS/C1553875 denotes active
T714 79-95 UP/Q25BC0 denotes interferon gamma
T711 79-95 UP/P01580 denotes interferon gamma
T696 79-95 UP/Q1WM28 denotes interferon gamma
T689 110-114 UMLS/C0075747 denotes CD28
T675 79-95 UP/O73915 denotes interferon gamma
T672 79-95 UP/Q9YGB9 denotes interferon gamma
T668 79-95 UP/P79154 denotes interferon gamma
T663 79-95 UP/P01579 denotes interferon gamma
T652 79-95 UP/P42162 denotes interferon gamma
T645 79-95 UP/P17773 denotes interferon gamma
T641 79-95 UP/P42160 denotes interferon gamma
T635 79-95 UP/O57608 denotes interferon gamma
T632 44-48 UMLS/C0085732 denotes able
T631 13-33 UMLS/C0003873 denotes rheumatoid arthritis
T628 79-95 UP/O57603 denotes interferon gamma
T623 79-95 UP/Q2PE75 denotes interferon gamma
T620 79-95 UP/Q8MKF5 denotes interferon gamma
T618 96-101 UMLS/C0687676 denotes after
T602 79-95 UP/P28333 denotes interferon gamma
T599 79-95 UP/Q866Y6 denotes interferon gamma
T592 79-95 UP/Q5I6S9 denotes interferon gamma
T587 79-95 UP/Q865W6 denotes interferon gamma
T578 79-95 UP/P17803 denotes interferon gamma
T574 79-95 UMLS/C0021740 denotes interferon gamma
T572 44-48 UMLS/C1299581 denotes able
T570 79-95 UMLS/C0021745 denotes interferon gamma
T567 79-95 UP/Q9TTB0 denotes interferon gamma
T546 102-105 UMLS/C0108779 denotes CD3
T524 6-12 UMLS/C1561511 denotes active
T523 6-12 UMLS/C1561512 denotes active
T522 6-12 UMLS/C1561513 denotes active
T516 68-75 UMLS/C1561574 denotes amounts
T512 6-12 UMLS/C0205177 denotes active
T508 79-95 UP/Q865X1 denotes interferon gamma
T468 79-95 UP/P42161 denotes interferon gamma
T462 6-12 UMLS/C1561510 denotes active
T460 6-12 UMLS/C1561509 denotes active
T459 6-12 UMLS/C1561508 denotes active
T458 6-12 UMLS/C1561507 denotes active
T443 6-12 UMLS/C1547419 denotes active
T439 60-67 UMLS/C0549177 denotes greater
T779 79-95 UP/O57571 denotes interferon gamma
T762 79-95 UP/O35735 denotes interferon gamma
T757 79-95 UP/P63310 denotes interferon gamma
T741 79-95 UP/P49708 denotes interferon gamma
T738 79-95 UP/Q9QXX2 denotes interferon gamma
T727 102-105 UMLS/C2698592 denotes CD3
T724 79-95 UP/Q4ZH68 denotes interferon gamma
T505 6-12 UMLS/C2347179 denotes active
T502 79-95 UP/P30123 denotes interferon gamma
T491 79-95 UP/O35497 denotes interferon gamma
T483 49-51 UMLS/C0319022 denotes to

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1223 110-114 NN denotes CD28
T1222 106-109 CC denotes and
T1221 102-105 NN denotes CD3
T1220 96-101 IN denotes after
T1219 90-95 NN denotes gamma
T1218 79-89 NN denotes interferon
T1217 76-78 IN denotes of
T1216 68-75 NN denotes amounts
T1215 60-67 JJ denotes greater
T1214 52-59 VB denotes produce
T1213 49-51 TO denotes to
T1212 44-48 JJ denotes able
T1211 39-43 VB denotes were
T1210 37-38 -RRB- denotes )
T1209 35-37 NN denotes RA
T1208 34-35 -LRB- denotes (
T1207 24-33 NN denotes arthritis
T1206 13-23 JJ denotes rheumatoid
T1205 6-12 JJ denotes active
T1204 1-5 IN denotes with
R99 T1207 T1204 arg2Of arthritis,with
R100 T1207 T1205 arg1Of arthritis,active
R101 T1207 T1206 arg1Of arthritis,rheumatoid
R102 T1207 T1208 arg1Of arthritis,(
R103 T1209 T1208 arg2Of RA,(
R104 T1210 T1208 arg3Of ),(
R107 T1212 T1211 arg2Of able,were
R108 T1214 T1212 arg2Of produce,able
R109 T1214 T1213 arg1Of produce,to
R112 T1216 T1214 arg2Of amounts,produce
R113 T1216 T1215 arg1Of amounts,greater
R114 T1216 T1217 arg1Of amounts,of
R116 T1219 T1217 arg2Of gamma,of
R117 T1219 T1218 arg1Of gamma,interferon
R118 T1219 T1220 arg1Of gamma,after
R119 T1221 T1222 arg1Of CD3,and
R120 T1223 T1222 arg2Of CD28,and

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T974 79-95 Protein denotes interferon gamma
T975 110-114 Protein denotes CD28

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1053 102-105 http://www.uniprot.org/uniprot/P07766 denotes CD3
T1052 102-105 http://www.uniprot.org/uniprot/P04234 denotes CD3
T1051 102-105 http://www.uniprot.org/uniprot/P20963 denotes CD3
T1050 110-114 http://www.uniprot.org/uniprot/P10747 denotes CD28
T1085 102-105 http://www.uniprot.org/uniprot/P09693 denotes CD3
T1038 79-95 http://www.uniprot.org/uniprot/P01579 denotes interferon gamma

GO-MF

Id Subject Object Predicate Lexical cue
T1007 79-95 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon gamma

ICD10

Id Subject Object Predicate Lexical cue
T1026 13-33 http://purl.bioontology.org/ontology/ICD10/M06.9 denotes rheumatoid arthritis
T1028 24-33 http://purl.bioontology.org/ontology/ICD10/M13.9 denotes arthritis

simple1

Id Subject Object Predicate Lexical cue
T1129 79-95 Protein denotes interferon gamma
T1130 110-114 Protein denotes CD28

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1930 110-114 Protein denotes CD28
T1929 79-95 Protein denotes interferon gamma
T1955 52-59 Gene_expression denotes produce
R630 T1929 T1955 themeOf interferon gamma,produce

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1450 52-59 Gene_expression denotes produce
T1426 110-114 Protein denotes CD28
T1425 79-95 Protein denotes interferon gamma
R320 T1425 T1450 themeOf interferon gamma,produce

DLUT931

Id Subject Object Predicate Lexical cue
T1495 52-59 Gene_expression denotes produce
T1471 110-114 Protein denotes CD28
T1470 79-95 Protein denotes interferon gamma
R335 T1470 T1495 themeOf interferon gamma,produce
R336 T1471 T1495 themeOf CD28,produce

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1891 102-105 Protein denotes CD3
T1886 79-89 Protein denotes interferon
T1885 110-114 Protein denotes CD28
T1868 35-37 Protein denotes RA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1621 110-114 NNP denotes CD28
T1620 106-109 CC denotes and
T1619 102-105 NNP denotes CD3
T1618 96-101 IN denotes after
T1617 90-95 NN denotes gamma
T1616 79-89 NN denotes interferon
T1615 76-78 IN denotes of
T1614 68-75 NNS denotes amounts
T1613 60-67 JJR denotes greater
T1612 52-59 VB denotes produce
T1611 49-51 TO denotes to
T1610 44-48 JJ denotes able
T1609 39-43 VBD denotes were
T1608 37-38 -RRB- denotes )
T1607 35-37 NNP denotes RA
T1606 34-35 -LRB- denotes (
T1605 24-33 NNS denotes arthritis
T1604 13-23 JJ denotes rheumatoid
T1603 6-12 JJ denotes active
T1602 1-5 IN denotes with
R376 T1603 T1605 amod active,arthritis
R377 T1604 T1605 amod rheumatoid,arthritis
R378 T1605 T1602 pobj arthritis,with
R379 T1606 T1605 punct (,arthritis
R380 T1607 T1605 appos RA,arthritis
R381 T1608 T1605 punct ),arthritis
R383 T1610 T1609 acomp able,were
R384 T1611 T1612 aux to,produce
R385 T1612 T1610 xcomp produce,able
R386 T1613 T1614 amod greater,amounts
R387 T1614 T1612 dobj amounts,produce
R388 T1615 T1614 prep of,amounts
R389 T1616 T1615 pobj interferon,of
R390 T1617 T1614 acl gamma,amounts
R391 T1618 T1617 prep after,gamma
R392 T1619 T1618 pobj CD3,after
R393 T1620 T1619 cc and,CD3

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1098 79-95 Protein denotes interferon gamma
T1099 102-105 Protein denotes CD3
T1100 110-114 Protein denotes CD28
T1103 52-59 Gene_expression denotes produce
T1104 52-59 Gene_expression denotes produce
T1105 68-75 Gene_expression denotes amounts
R655 T1098 T1105 themeOf interferon gamma,amounts
R656 T1099 T1103 themeOf CD3,produce
R657 T1100 T1104 themeOf CD28,produce

testone

Id Subject Object Predicate Lexical cue
T65 52-59 Gene_expression denotes produce
T40 110-114 Protein denotes CD28
T39 79-95 Protein denotes interferon gamma
R2 T39 T65 themeOf interferon gamma,produce
R3 T40 T65 themeOf CD28,produce